GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000799-TA|BGIBMGA000799-PA|undefined
         (468 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    27   0.44 
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    23   7.2  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   7.2  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 26.6 bits (56), Expect = 0.44
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 4   RSGKRIRSMSNDSTVKDDVDITVRSERKVRNKL 36
           R G   R  S DST   D DI++ + ++ R+KL
Sbjct: 208 RKGSIARCWSLDSTAASDEDISLTTHQQKRHKL 240


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 51  CKKRSNYVRYPTDDEQHSADND 72
           CK+R+N +R  +D  Q +  ND
Sbjct: 82  CKRRTNTLRRGSDGSQLAMRND 103


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 51  CKKRSNYVRYPTDDEQHSADND 72
           CK+R+N +R  +D  Q +  ND
Sbjct: 530 CKRRTNTLRRGSDGSQLAMRND 551


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.309    0.124    0.336 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,873
Number of Sequences: 429
Number of extensions: 4853
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 3
length of query: 468
length of database: 140,377
effective HSP length: 60
effective length of query: 408
effective length of database: 114,637
effective search space: 46771896
effective search space used: 46771896
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 45 (22.2 bits)