Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000798-TA|BGIBMGA000798-PA|IPR004088|KH, type 1,
IPR004087|KH
(149 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical pr... 48 2e-06
U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical pr... 48 2e-06
Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical p... 43 1e-04
Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical pr... 43 1e-04
AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical ... 42 1e-04
AC006714-9|AAK29714.5| 430|Caenorhabditis elegans Patterned exp... 40 0.001
U00047-8|AAP68924.1| 510|Caenorhabditis elegans Hypothetical pr... 39 0.001
U00047-7|AAA50693.2| 557|Caenorhabditis elegans Hypothetical pr... 39 0.001
AC024089-1|AAK09071.1| 641|Caenorhabditis elegans Hypothetical ... 37 0.007
U88174-6|AAB42272.1| 680|Caenorhabditis elegans Hypothetical pr... 34 0.037
U00047-6|AAA50692.1| 279|Caenorhabditis elegans Hypothetical pr... 32 0.20
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 31 0.26
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 31 0.26
Z68337-3|CAA92750.2| 712|Caenorhabditis elegans Hypothetical pr... 31 0.34
Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical pr... 30 0.60
AL117204-21|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 30 0.60
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 30 0.60
Z81130-2|CAB03417.1| 463|Caenorhabditis elegans Hypothetical pr... 29 1.4
U20535-1|AAC46632.1| 463|Caenorhabditis elegans gld-1 protein. 29 1.4
AF000197-8|AAB52897.2| 328|Caenorhabditis elegans Star (rna bin... 28 2.4
AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna bin... 28 2.4
AF000197-6|AAP68907.1| 403|Caenorhabditis elegans Star (rna bin... 28 2.4
U41037-1|AAA82387.1| 629|Caenorhabditis elegans Gtpase activati... 28 3.2
AF118123-1|AAD13781.1| 629|Caenorhabditis elegans GTPase activa... 28 3.2
U40029-14|ABD94112.1| 2025|Caenorhabditis elegans Hypothetical p... 27 4.2
U40029-13|ABD94113.1| 1884|Caenorhabditis elegans Hypothetical p... 27 4.2
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 27 5.6
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 27 5.6
Z70686-9|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 27 5.6
Z70686-8|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 27 5.6
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 27 5.6
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 27 5.6
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 27 5.6
>U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical
protein F26B1.2c protein.
Length = 380
Score = 48.4 bits (110), Expect = 2e-06
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 59 PKDSKNVEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQT 118
P + V I + G I+G GG + I+Q SGA I + + G RI+TI G++
Sbjct: 298 PVTTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITLEQSN----GQPERIITIKGTEQ 353
Query: 119 AISNAHYLIEQKIQEEELKRTR 140
I +A YL++Q ++ R R
Sbjct: 354 QIHSAQYLLQQCVRNSTQGRER 375
Score = 30.3 bits (65), Expect = 0.60
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 73 GAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAISNAHYLIEQKIQ 132
GA++G G + E+++ A ++I APG+ +R++ SG Q N +IE+ ++
Sbjct: 120 GALIGRNGSKIKELREKCSARLKIFTG--CAPGSTDRVLITSGEQ---KNVLGIIEEVMK 174
Query: 133 E 133
E
Sbjct: 175 E 175
Score = 26.2 bits (55), Expect = 9.8
Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 58 QPKDSKNVEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQ 117
Q K + ++ GAI+G GG ++ ++ A++Q+ T R+ T++ +
Sbjct: 30 QGKFEVRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDS-----NTPERVCTVTADE 84
Query: 118 TAISN 122
+ N
Sbjct: 85 KTVLN 89
>U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical
protein F26B1.2a protein.
Length = 397
Score = 48.4 bits (110), Expect = 2e-06
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 59 PKDSKNVEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQT 118
P + V I + G I+G GG + I+Q SGA I + + G RI+TI G++
Sbjct: 315 PVTTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITLEQSN----GQPERIITIKGTEQ 370
Query: 119 AISNAHYLIEQKIQEEELKRTR 140
I +A YL++Q ++ R R
Sbjct: 371 QIHSAQYLLQQCVRNSTQGRER 392
Score = 30.3 bits (65), Expect = 0.60
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 73 GAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAISNAHYLIEQKIQ 132
GA++G G + E+++ A ++I APG+ +R++ SG Q N +IE+ ++
Sbjct: 137 GALIGRNGSKIKELREKCSARLKIFTG--CAPGSTDRVLITSGEQ---KNVLGIIEEVMK 191
Query: 133 E 133
E
Sbjct: 192 E 192
Score = 26.2 bits (55), Expect = 9.8
Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 58 QPKDSKNVEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQ 117
Q K + ++ GAI+G GG ++ ++ A++Q+ T R+ T++ +
Sbjct: 47 QGKFEVRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDS-----NTPERVCTVTADE 101
Query: 118 TAISN 122
+ N
Sbjct: 102 KTVLN 106
>Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical
protein C12D8.1c protein.
Length = 548
Score = 42.7 bits (96), Expect = 1e-04
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 67 IAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAISNAHYL 126
I E VG ++G GG + IQ +G +Q+S P + R+VT+ GS++ + A +L
Sbjct: 13 IPESAVGIVIGRGGSEIQGIQAKAGCRVQMSPDAD--PSSGVRMVTLEGSRSNVETAKHL 70
Query: 127 IEQKIQEEELKRTRH 141
I + + + R ++
Sbjct: 71 INEVVARSQNPRPQY 85
Score = 37.1 bits (82), Expect = 0.005
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 73 GAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAISNAHYLIEQKI 131
G ++G GG ++ +I SGA+ ++S+ T ++ I G + AI +A +LI K+
Sbjct: 289 GLVIGKGGETIKQINSESGAHCELSRDPT--GNADEKVFVIKGGKRAIEHAKHLIRIKV 345
>Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical
protein C12D8.1b protein.
Length = 611
Score = 42.7 bits (96), Expect = 1e-04
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 67 IAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAISNAHYL 126
I E VG ++G GG + IQ +G +Q+S P + R+VT+ GS++ + A +L
Sbjct: 76 IPESAVGIVIGRGGSEIQGIQAKAGCRVQMSPDAD--PSSGVRMVTLEGSRSNVETAKHL 133
Query: 127 IEQKIQEEELKRTRH 141
I + + + R ++
Sbjct: 134 INEVVARSQNPRPQY 148
Score = 37.1 bits (82), Expect = 0.005
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 73 GAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAISNAHYLIEQKI 131
G ++G GG ++ +I SGA+ ++S+ T ++ I G + AI +A +LI K+
Sbjct: 352 GLVIGKGGETIKQINSESGAHCELSRDPT--GNADEKVFVIKGGKRAIEHAKHLIRIKV 408
>Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical
protein C12D8.1a protein.
Length = 589
Score = 42.7 bits (96), Expect = 1e-04
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 67 IAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAISNAHYL 126
I E VG ++G GG + IQ +G +Q+S P + R+VT+ GS++ + A +L
Sbjct: 54 IPESAVGIVIGRGGSEIQGIQAKAGCRVQMSPDAD--PSSGVRMVTLEGSRSNVETAKHL 111
Query: 127 IEQKIQEEELKRTRH 141
I + + + R ++
Sbjct: 112 INEVVARSQNPRPQY 126
Score = 37.1 bits (82), Expect = 0.005
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 73 GAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAISNAHYLIEQKI 131
G ++G GG ++ +I SGA+ ++S+ T ++ I G + AI +A +LI K+
Sbjct: 330 GLVIGKGGETIKQINSESGAHCELSRDPT--GNADEKVFVIKGGKRAIEHAKHLIRIKV 386
>AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical
protein Y59A8B.10 protein.
Length = 413
Score = 42.3 bits (95), Expect = 1e-04
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 72 VGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAISNAHYLIEQKI 131
VGAI+G GG ++ ++ + +Q+SK PGT RI + G I I+ KI
Sbjct: 53 VGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERICLVKGRLNNIMAVIESIQDKI 112
Query: 132 QEE 134
+E+
Sbjct: 113 REK 115
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/65 (24%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 73 GAILGPGGRSLVEIQQMSGANIQI-SKKGTF-APGTRNRIVTISGSQ-TAISNAHYLIEQ 129
G ++G G ++ +I++ G IQ+ K G+ A + R+VT++ + +A+ A + +
Sbjct: 146 GMVIGKSGANIKDIREQFGCQIQVYPKAGSVEAKTSLERVVTVAHDEASALLQAASRVLE 205
Query: 130 KIQEE 134
K+ +
Sbjct: 206 KVASD 210
>AC006714-9|AAK29714.5| 430|Caenorhabditis elegans Patterned
expression site protein 4 protein.
Length = 430
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 58 QPKDSKNVEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQ 117
+P + V + G+++G GG + +I++ +GA+IQ++ + P + R VT+SG+
Sbjct: 150 KPPITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVASE--MLPHSTERAVTLSGTA 207
Query: 118 TAISNA 123
AI+ A
Sbjct: 208 DAINLA 213
Score = 36.3 bits (80), Expect = 0.009
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 72 VGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAISNAHYLIEQKI 131
VG+I+G G + +I++ SGA I IS P RIVTI+G+ I A ++ K
Sbjct: 83 VGSIIGKKGDQIKKIREESGAKINISDGS--CP---ERIVTITGTLGVIGKAFNMVCNKF 137
Query: 132 QEEEL 136
+E+ L
Sbjct: 138 EEDML 142
>U00047-8|AAP68924.1| 510|Caenorhabditis elegans Hypothetical
protein ZK418.9b protein.
Length = 510
Score = 39.1 bits (87), Expect = 0.001
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 67 IAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAISNAHYL 126
+ E +VG ++G GG + IQQ SG +Q+ G RN TI G ++ A +
Sbjct: 13 VPEKVVGLVIGKGGSEIRLIQQTSGCRVQMDPDHQSVNGFRN--CTIEGPPDQVAVARQM 70
Query: 127 IEQKIQEEE 135
I Q I +
Sbjct: 71 ITQVINRNQ 79
Score = 32.7 bits (71), Expect = 0.11
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 73 GAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAISNAHYLIEQKIQ 132
G ++G GG ++ +I++ +GA ++ ++ I GSQ I +A +L+ K+
Sbjct: 297 GLVIGKGGENIKQIERETGATCGLAPAAE-QKNEDEKVFEIKGSQLQIHHASHLVRIKVG 355
Query: 133 E 133
E
Sbjct: 356 E 356
Score = 29.9 bits (64), Expect = 0.79
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 72 VGAILGPGGRSLVEIQQMSG-ANIQISKKGTFAPGTRNRIVTISGSQTAISNAHYLI 127
+G ++G GG ++ +Q+ SG N + ++ T A G + + + + GS AI A L+
Sbjct: 102 IGLVIGKGGETIRIVQEQSGLRNCNVVQETTTATG-QPKPLRMIGSPAAIETAKALV 157
Score = 29.5 bits (63), Expect = 1.0
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 57 AQPKDSKN-VEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISG 115
AQ +K V + + G I+G GG + + +G IQ K P + +RI I G
Sbjct: 188 AQEAQAKGEVIVPRLSAGMIIGKGGEMIKRLAAETGTKIQF--KPDTNPNSEDRIAVIMG 245
Query: 116 SQTAISNA 123
++ I A
Sbjct: 246 TRDQIYRA 253
>U00047-7|AAA50693.2| 557|Caenorhabditis elegans Hypothetical
protein ZK418.9a protein.
Length = 557
Score = 39.1 bits (87), Expect = 0.001
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 67 IAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAISNAHYL 126
+ E +VG ++G GG + IQQ SG +Q+ G RN TI G ++ A +
Sbjct: 60 VPEKVVGLVIGKGGSEIRLIQQTSGCRVQMDPDHQSVNGFRN--CTIEGPPDQVAVARQM 117
Query: 127 IEQKIQEEE 135
I Q I +
Sbjct: 118 ITQVINRNQ 126
Score = 32.7 bits (71), Expect = 0.11
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 73 GAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAISNAHYLIEQKIQ 132
G ++G GG ++ +I++ +GA ++ ++ I GSQ I +A +L+ K+
Sbjct: 344 GLVIGKGGENIKQIERETGATCGLAPAAE-QKNEDEKVFEIKGSQLQIHHASHLVRIKVG 402
Query: 133 E 133
E
Sbjct: 403 E 403
Score = 29.9 bits (64), Expect = 0.79
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 72 VGAILGPGGRSLVEIQQMSG-ANIQISKKGTFAPGTRNRIVTISGSQTAISNAHYLI 127
+G ++G GG ++ +Q+ SG N + ++ T A G + + + + GS AI A L+
Sbjct: 149 IGLVIGKGGETIRIVQEQSGLRNCNVVQETTTATG-QPKPLRMIGSPAAIETAKALV 204
Score = 29.5 bits (63), Expect = 1.0
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 57 AQPKDSKN-VEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISG 115
AQ +K V + + G I+G GG + + +G IQ K P + +RI I G
Sbjct: 235 AQEAQAKGEVIVPRLSAGMIIGKGGEMIKRLAAETGTKIQF--KPDTNPNSEDRIAVIMG 292
Query: 116 SQTAISNA 123
++ I A
Sbjct: 293 TRDQIYRA 300
>AC024089-1|AAK09071.1| 641|Caenorhabditis elegans Hypothetical
protein C36E6.1b protein.
Length = 641
Score = 36.7 bits (81), Expect = 0.007
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 73 GAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAISNAHYLIEQKI 131
G ++G GG ++ +I Q SGA+ ++S+ P + I GS+ + +A +LI K+
Sbjct: 338 GLVIGRGGETIKQINQESGAHCELSRDPNTNP--IEKTFVIRGSEAQVEHAKHLIRVKV 394
Score = 29.9 bits (64), Expect = 0.79
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 65 VEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAISNAH 124
V + E VG ++G G + I Q SG +Q++ + + T R+V I G I A
Sbjct: 59 VPVPEQCVGLVIGRNGAEVQAISQKSGCRVQVTVQPS---STGFRLVEIYGIPENIERAK 115
Query: 125 YLIEQKI 131
I + +
Sbjct: 116 AYISEVV 122
Score = 26.6 bits (56), Expect = 7.4
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 62 SKNVEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAIS 121
S V++ VGAI+G G+++ ++ +G IQ P R + I G++ +
Sbjct: 247 SLQVKVPRCTVGAIMGLQGKNIKKLSDETGTKIQFLPDDD--PKLMERSLAIIGNKNKVY 304
Query: 122 NAHYLIEQKIQ 132
LI+ ++
Sbjct: 305 VCAQLIKAIVE 315
Score = 26.2 bits (55), Expect = 9.8
Identities = 12/55 (21%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 73 GAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAISNAHYLI 127
GAI+G GG + +++ + N+Q+ + A + + I+G + L+
Sbjct: 169 GAIIGKGGEQMRKLRSWTNCNVQLLQDNNIADTVKP--LKITGDPKQVEQCRLLV 221
>U88174-6|AAB42272.1| 680|Caenorhabditis elegans Hypothetical
protein M01A10.1 protein.
Length = 680
Score = 34.3 bits (75), Expect = 0.037
Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 73 GAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAISNAHYLIEQKI 131
G ++G GG ++ +I + SGA ++S+ + + + + I GS+T + +A +LI K+
Sbjct: 423 GLVIGRGGETIRQINKESGAYCEMSRDPSISAIEKQFV--IRGSETQVEHAKHLIRVKV 479
Score = 29.1 bits (62), Expect = 1.4
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 64 NVEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAISNA 123
+V I E VG ++G G + I Q SG +QI + + T R V I G I A
Sbjct: 149 SVSIPEESVGLVIGRNGVEIQAISQKSGCRVQIVAEPS---TTGYRSVDIYGISENIEVA 205
Query: 124 HYLIEQKI 131
LI + +
Sbjct: 206 KKLINEVV 213
>U00047-6|AAA50692.1| 279|Caenorhabditis elegans Hypothetical
protein ZK418.8 protein.
Length = 279
Score = 31.9 bits (69), Expect = 0.20
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 58 QPKDSKNVEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQ 117
+P + E+ +VG ++G GGR + ++ NIQIS P TR+ +VT+ G
Sbjct: 161 KPWKTAEFEVETQMVGYLVGRGGRHIKTLRDKFSVNIQISDPIPDDP-TRS-LVTVRGRD 218
Query: 118 -TAISNAHYLIEQKI 131
TA+ ++++ +
Sbjct: 219 LTALKEVEVVMKETV 233
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 31.5 bits (68), Expect = 0.26
Identities = 12/35 (34%), Positives = 26/35 (74%)
Query: 65 VEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKK 99
V + I+G I+G GG+++ E+Q+++GA ++I ++
Sbjct: 562 VSVPTRIIGRIIGKGGQNVRELQRITGAVVKIPEE 596
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 31.5 bits (68), Expect = 0.26
Identities = 12/35 (34%), Positives = 26/35 (74%)
Query: 65 VEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKK 99
V + I+G I+G GG+++ E+Q+++GA ++I ++
Sbjct: 686 VSVPTRIIGRIIGKGGQNVRELQRITGAVVKIPEE 720
>Z68337-3|CAA92750.2| 712|Caenorhabditis elegans Hypothetical
protein M7.3 protein.
Length = 712
Score = 31.1 bits (67), Expect = 0.34
Identities = 14/62 (22%), Positives = 31/62 (50%)
Query: 62 SKNVEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGSQTAIS 121
S +E+ + I+G GGR + ++ +M+ +I ++ ++ V+ISG+ +
Sbjct: 105 SLKMELHHSLHSHIIGKGGRGIQKVMKMTSCHIHFPDSNKYSDSNKSDQVSISGTPVNVF 164
Query: 122 NA 123
A
Sbjct: 165 EA 166
>Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical
protein F54C8.1 protein.
Length = 298
Score = 30.3 bits (65), Expect = 0.60
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 98 KKGTFAPGTRNRIVTISGSQTAISNAHYLIEQKIQEEELKR 138
+K F T +RI T + TA+++A +IE I+ +LKR
Sbjct: 71 EKSDFVTLTMSRIKTCNNVSTAVADADLIIEAAIENIDLKR 111
>AL117204-21|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 30.3 bits (65), Expect = 0.60
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 72 VGAILGPGGRSLVEIQQMSGANIQISKKGTFAPG-TRNRIVTISG 115
VG ++GP G +L ++ +GA I I KG+ G NR+ + G
Sbjct: 320 VGLLIGPRGNTLKSLEAETGAKIIIRGKGSIKEGKLTNRLGPMPG 364
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 30.3 bits (65), Expect = 0.60
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 72 VGAILGPGGRSLVEIQQMSGANIQISKKGTFAPG-TRNRIVTISG 115
VG ++GP G +L ++ +GA I I KG+ G NR+ + G
Sbjct: 320 VGLLIGPRGNTLKSLEAETGAKIIIRGKGSIKEGKLTNRLGPMPG 364
>Z81130-2|CAB03417.1| 463|Caenorhabditis elegans Hypothetical
protein T23G11.3 protein.
Length = 463
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 72 VGAILGPGGRSLVEIQQMSGANIQISKKGT 101
VG ILGP G + +++Q +G I + KG+
Sbjct: 222 VGRILGPRGMTAKQLEQDTGCKIMVRGKGS 251
>U20535-1|AAC46632.1| 463|Caenorhabditis elegans gld-1 protein.
Length = 463
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 72 VGAILGPGGRSLVEIQQMSGANIQISKKGT 101
VG ILGP G + +++Q +G I + KG+
Sbjct: 222 VGRILGPRGMTAKQLEQDTGCKIMVRGKGS 251
>AF000197-8|AAB52897.2| 328|Caenorhabditis elegans Star (rna
binding protein) familyprotein 2, isoform a protein.
Length = 328
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 72 VGAILGPGGRSLVEIQQMSGANIQISKKGT 101
VG ILGP G + +++Q +G I + +G+
Sbjct: 105 VGRILGPRGMTAKQLEQETGCKIMVRGRGS 134
>AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna
binding protein) familyprotein 2, isoform c protein.
Length = 445
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 72 VGAILGPGGRSLVEIQQMSGANIQISKKGT 101
VG ILGP G + +++Q +G I + +G+
Sbjct: 147 VGRILGPRGMTAKQLEQETGCKIMVRGRGS 176
>AF000197-6|AAP68907.1| 403|Caenorhabditis elegans Star (rna
binding protein) familyprotein 2, isoform b protein.
Length = 403
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 72 VGAILGPGGRSLVEIQQMSGANIQISKKGT 101
VG ILGP G + +++Q +G I + +G+
Sbjct: 105 VGRILGPRGMTAKQLEQETGCKIMVRGRGS 134
>U41037-1|AAA82387.1| 629|Caenorhabditis elegans Gtpase activating
protein familyprotein 1 protein.
Length = 629
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 56 DAQPKDSKNVEIAEVIVGAILGPGGRSLVEIQQMS 90
D QP + V + E + LGP RSLVE+ S
Sbjct: 148 DVQPLTASLVAVIEALPKVELGPVSRSLVELMAQS 182
>AF118123-1|AAD13781.1| 629|Caenorhabditis elegans GTPase
activating protein GAP-1 protein.
Length = 629
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 56 DAQPKDSKNVEIAEVIVGAILGPGGRSLVEIQQMS 90
D QP + V + E + LGP RSLVE+ S
Sbjct: 148 DVQPLTASLVAVIEALPKVELGPVSRSLVELMAQS 182
>U40029-14|ABD94112.1| 2025|Caenorhabditis elegans Hypothetical
protein F10G7.10a protein.
Length = 2025
Score = 27.5 bits (58), Expect = 4.2
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 97 SKKGTFAPGTRNRIVTISGSQTAISNAHYLIEQKIQEEELKR 138
S G F T + +V G Q AI YL K ++ LKR
Sbjct: 1934 SSSGLFLSVTSSMVVVSRGKQAAIWGTIYLDAHKEEDRNLKR 1975
>U40029-13|ABD94113.1| 1884|Caenorhabditis elegans Hypothetical
protein F10G7.10b protein.
Length = 1884
Score = 27.5 bits (58), Expect = 4.2
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 97 SKKGTFAPGTRNRIVTISGSQTAISNAHYLIEQKIQEEELKR 138
S G F T + +V G Q AI YL K ++ LKR
Sbjct: 1793 SSSGLFLSVTSSMVVVSRGKQAAIWGTIYLDAHKEEDRNLKR 1834
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 27.1 bits (57), Expect = 5.6
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 56 DAQPKDSKNVEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISG 115
D + + S + I ++G GG ++ +++ +GA I+I+K + R V G
Sbjct: 1789 DTRNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEINKIQE-SNKQAERTVLAKG 1847
Query: 116 SQTAISNAHYLIEQKIQEEELKRTRHNAISTLMQ 149
+ + A +I I + ++ T +AI T+++
Sbjct: 1848 TPEMVRYAMNIINYMIYDADVLVT--DAIRTVLR 1879
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 27.1 bits (57), Expect = 5.6
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 56 DAQPKDSKNVEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISG 115
D + + S + I ++G GG ++ +++ +GA I+I+K + R V G
Sbjct: 1789 DTRNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEINKIQE-SNKQAERTVLAKG 1847
Query: 116 SQTAISNAHYLIEQKIQEEELKRTRHNAISTLMQ 149
+ + A +I I + ++ T +AI T+++
Sbjct: 1848 TPEMVRYAMNIINYMIYDADVLVT--DAIRTVLR 1879
>Z70686-9|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 27.1 bits (57), Expect = 5.6
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 56 DAQPKDSKNVEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISG 115
D + + S + I ++G GG ++ +++ +GA I+I+K + R V G
Sbjct: 610 DTRNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEINKIQE-SNKQAERTVLAKG 668
Query: 116 SQTAISNAHYLIEQKIQEEELKRTRHNAISTLMQ 149
+ + A +I I + ++ T +AI T+++
Sbjct: 669 TPEMVRYAMNIINYMIYDADVLVT--DAIRTVLR 700
>Z70686-8|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 27.1 bits (57), Expect = 5.6
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 56 DAQPKDSKNVEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISG 115
D + + S + I ++G GG ++ +++ +GA I+I+K + R V G
Sbjct: 610 DTRNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEINKIQE-SNKQAERTVLAKG 668
Query: 116 SQTAISNAHYLIEQKIQEEELKRTRHNAISTLMQ 149
+ + A +I I + ++ T +AI T+++
Sbjct: 669 TPEMVRYAMNIINYMIYDADVLVT--DAIRTVLR 700
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 27.1 bits (57), Expect = 5.6
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 56 DAQPKDSKNVEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISG 115
D + + S + I ++G GG ++ +++ +GA I+I+K + R V G
Sbjct: 1789 DTRNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEINKIQE-SNKQAERTVLAKG 1847
Query: 116 SQTAISNAHYLIEQKIQEEELKRTRHNAISTLMQ 149
+ + A +I I + ++ T +AI T+++
Sbjct: 1848 TPEMVRYAMNIINYMIYDADVLVT--DAIRTVLR 1879
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 27.1 bits (57), Expect = 5.6
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 56 DAQPKDSKNVEIAEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISG 115
D + + S + I ++G GG ++ +++ +GA I+I+K + R V G
Sbjct: 1789 DTRNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEINKIQE-SNKQAERTVLAKG 1847
Query: 116 SQTAISNAHYLIEQKIQEEELKRTRHNAISTLMQ 149
+ + A +I I + ++ T +AI T+++
Sbjct: 1848 TPEMVRYAMNIINYMIYDADVLVT--DAIRTVLR 1879
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 27.1 bits (57), Expect = 5.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 7 GARGGSLDRFAEVAFEALRPPAVAP 31
GAR GS+ R A + F + +PP V P
Sbjct: 259 GARHGSISRQATLTFVSHKPPPVNP 283
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.313 0.130 0.355
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,935,551
Number of Sequences: 27539
Number of extensions: 92217
Number of successful extensions: 216
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 149
Number of HSP's gapped (non-prelim): 67
length of query: 149
length of database: 12,573,161
effective HSP length: 75
effective length of query: 74
effective length of database: 10,507,736
effective search space: 777572464
effective search space used: 777572464
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 55 (26.2 bits)
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