Silkworm BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000797-TA|BGIBMGA000797-PA|undefined
         (166 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   3.7  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   6.5  

>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.4 bits (48), Expect = 3.7
 Identities = 13/27 (48%), Positives = 15/27 (55%)

Query: 121 RDDRNTFMPARAVLPLAYSGTSRLDFR 147
           R D N F P+R  +  A S  SRLD R
Sbjct: 167 RADTNRFPPSRPDVTFASSVISRLDPR 193


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 4/29 (13%)

Query: 94  PPAVFG----PLAQVSLGLPLIGLNIDPP 118
           PP + G    P+   ++G+P +GL + PP
Sbjct: 110 PPPMMGMRPPPMMVPTMGMPPMGLGMRPP 138


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.141    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,389
Number of Sequences: 2123
Number of extensions: 4457
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 2
length of query: 166
length of database: 516,269
effective HSP length: 59
effective length of query: 107
effective length of database: 391,012
effective search space: 41838284
effective search space used: 41838284
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)