GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000797-TA|BGIBMGA000797-PA|undefined
         (166 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000EBCFD8 Cluster: PREDICTED: hypothetical protein;...    34   1.9  
UniRef50_A7CQ09 Cluster: Putative uncharacterized protein; n=1; ...    34   1.9  
UniRef50_Q8IGS7 Cluster: RE36563p; n=13; Endopterygota|Rep: RE36...    32   5.7  

>UniRef50_UPI0000EBCFD8 Cluster: PREDICTED: hypothetical protein;
           n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
           Bos taurus
          Length = 352

 Score = 33.9 bits (74), Expect = 1.9
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 4/60 (6%)

Query: 83  SAAYFPLPAQDPPAVFGPLAQVSLGLPLIG-LNIDPPRPRDDRNTFMPAR-AVLPLAYSG 140
           S A FP P  DP +  GP++  S  LP +G L +  PRP      F+P R + LPL  +G
Sbjct: 170 SRAKFPGPGSDPRSGSGPVS--SRPLPQLGDLALPGPRPFSSLPFFLPLRHSPLPLGRTG 227


>UniRef50_A7CQ09 Cluster: Putative uncharacterized protein; n=1;
           Opitutaceae bacterium TAV2|Rep: Putative uncharacterized
           protein - Opitutaceae bacterium TAV2
          Length = 255

 Score = 33.9 bits (74), Expect = 1.9
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 2/46 (4%)

Query: 106 LGLPLIGLNIDPPRPRDDRNTFMPARAVLPLAYSG--TSRLDFRIL 149
           L LP     I PP P+ DRN +   RA LP  Y G   S L+ R+L
Sbjct: 75  LPLPADTNTITPPIPQTDRNAWFWRRAFLPYVYKGINVSTLETRLL 120


>UniRef50_Q8IGS7 Cluster: RE36563p; n=13; Endopterygota|Rep:
           RE36563p - Drosophila melanogaster (Fruit fly)
          Length = 605

 Score = 32.3 bits (70), Expect = 5.7
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 22  PGTPPSAPITQHTLDHIKGALRQAGYSEAGVSEI 55
           P   P+  +    L+HIK A+R +GYSE   +E+
Sbjct: 339 PNPAPNLAVATQLLEHIKVAMRGSGYSETVTNEV 372


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.322    0.141    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,145,743
Number of Sequences: 1657284
Number of extensions: 5502960
Number of successful extensions: 11525
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 11523
Number of HSP's gapped (non-prelim): 3
length of query: 166
length of database: 575,637,011
effective HSP length: 95
effective length of query: 71
effective length of database: 418,195,031
effective search space: 29691847201
effective search space used: 29691847201
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 68 (31.5 bits)