GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000797-TA|BGIBMGA000797-PA|undefined
         (166 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015219-1|AAT94448.1|  563|Drosophila melanogaster RE39088p pro...    32   0.34 
BT001623-1|AAN71378.1|  605|Drosophila melanogaster RE36563p pro...    32   0.34 
AY089247-1|AAL89985.1|  539|Drosophila melanogaster AT03366p pro...    32   0.34 
AF220423-1|AAG36790.1|  561|Drosophila melanogaster PASILLA spli...    32   0.34 
AF220422-1|AAG36789.1|  572|Drosophila melanogaster PASILLA spli...    32   0.34 
AF220421-1|AAG36788.1|  475|Drosophila melanogaster PASILLA spli...    32   0.34 
AF220420-1|AAG36787.1|  475|Drosophila melanogaster PASILLA spli...    32   0.34 
AE014297-941|ABI31151.1|  519|Drosophila melanogaster CG8144-PI,...    32   0.34 
AE014297-940|AAF54378.2|  561|Drosophila melanogaster CG8144-PC,...    32   0.34 
AE014297-939|AAN13428.1|  583|Drosophila melanogaster CG8144-PD,...    32   0.34 
AE014297-938|AAN13427.1|  475|Drosophila melanogaster CG8144-PB,...    32   0.34 
AE014297-937|ABI31154.1|  539|Drosophila melanogaster CG8144-PJ,...    32   0.34 
AE014297-936|ABI31152.1|  550|Drosophila melanogaster CG8144-PK,...    32   0.34 
AE014297-935|ABI31155.1|  572|Drosophila melanogaster CG8144-PH,...    32   0.34 
AE014297-934|ABI31153.1|  572|Drosophila melanogaster CG8144-PG,...    32   0.34 
AE014297-933|AAF54380.2|  572|Drosophila melanogaster CG8144-PF,...    32   0.34 

>BT015219-1|AAT94448.1|  563|Drosophila melanogaster RE39088p
           protein.
          Length = 563

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 22  PGTPPSAPITQHTLDHIKGALRQAGYSEAGVSEI 55
           P   P+  +    L+HIK A+R +GYSE   +E+
Sbjct: 361 PNPAPNLAVATQLLEHIKVAMRGSGYSETVTNEV 394


>BT001623-1|AAN71378.1|  605|Drosophila melanogaster RE36563p
           protein.
          Length = 605

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 22  PGTPPSAPITQHTLDHIKGALRQAGYSEAGVSEI 55
           P   P+  +    L+HIK A+R +GYSE   +E+
Sbjct: 339 PNPAPNLAVATQLLEHIKVAMRGSGYSETVTNEV 372


>AY089247-1|AAL89985.1|  539|Drosophila melanogaster AT03366p
           protein.
          Length = 539

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 22  PGTPPSAPITQHTLDHIKGALRQAGYSEAGVSEI 55
           P   P+  +    L+HIK A+R +GYSE   +E+
Sbjct: 273 PNPAPNLAVATQLLEHIKVAMRGSGYSETVTNEV 306


>AF220423-1|AAG36790.1|  561|Drosophila melanogaster PASILLA splice
           variant 4 protein.
          Length = 561

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 22  PGTPPSAPITQHTLDHIKGALRQAGYSEAGVSEI 55
           P   P+  +    L+HIK A+R +GYSE   +E+
Sbjct: 295 PNPAPNLAVATQLLEHIKVAMRGSGYSETVTNEV 328


>AF220422-1|AAG36789.1|  572|Drosophila melanogaster PASILLA splice
           variant 3 protein.
          Length = 572

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 22  PGTPPSAPITQHTLDHIKGALRQAGYSEAGVSEI 55
           P   P+  +    L+HIK A+R +GYSE   +E+
Sbjct: 306 PNPAPNLAVATQLLEHIKVAMRGSGYSETVTNEV 339


>AF220421-1|AAG36788.1|  475|Drosophila melanogaster PASILLA splice
           variant 2 protein.
          Length = 475

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 22  PGTPPSAPITQHTLDHIKGALRQAGYSEAGVSEI 55
           P   P+  +    L+HIK A+R +GYSE   +E+
Sbjct: 273 PNPAPNLAVATQLLEHIKVAMRGSGYSETVTNEV 306


>AF220420-1|AAG36787.1|  475|Drosophila melanogaster PASILLA splice
           variant 1 protein.
          Length = 475

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 22  PGTPPSAPITQHTLDHIKGALRQAGYSEAGVSEI 55
           P   P+  +    L+HIK A+R +GYSE   +E+
Sbjct: 273 PNPAPNLAVATQLLEHIKVAMRGSGYSETVTNEV 306


>AE014297-941|ABI31151.1|  519|Drosophila melanogaster CG8144-PI,
           isoform I protein.
          Length = 519

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 22  PGTPPSAPITQHTLDHIKGALRQAGYSEAGVSEI 55
           P   P+  +    L+HIK A+R +GYSE   +E+
Sbjct: 317 PNPAPNLAVATQLLEHIKVAMRGSGYSETVTNEV 350


>AE014297-940|AAF54378.2|  561|Drosophila melanogaster CG8144-PC,
           isoform C protein.
          Length = 561

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 22  PGTPPSAPITQHTLDHIKGALRQAGYSEAGVSEI 55
           P   P+  +    L+HIK A+R +GYSE   +E+
Sbjct: 295 PNPAPNLAVATQLLEHIKVAMRGSGYSETVTNEV 328


>AE014297-939|AAN13428.1|  583|Drosophila melanogaster CG8144-PD,
           isoform D protein.
          Length = 583

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 22  PGTPPSAPITQHTLDHIKGALRQAGYSEAGVSEI 55
           P   P+  +    L+HIK A+R +GYSE   +E+
Sbjct: 317 PNPAPNLAVATQLLEHIKVAMRGSGYSETVTNEV 350


>AE014297-938|AAN13427.1|  475|Drosophila melanogaster CG8144-PB,
           isoform B protein.
          Length = 475

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 22  PGTPPSAPITQHTLDHIKGALRQAGYSEAGVSEI 55
           P   P+  +    L+HIK A+R +GYSE   +E+
Sbjct: 273 PNPAPNLAVATQLLEHIKVAMRGSGYSETVTNEV 306


>AE014297-937|ABI31154.1|  539|Drosophila melanogaster CG8144-PJ,
           isoform J protein.
          Length = 539

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 22  PGTPPSAPITQHTLDHIKGALRQAGYSEAGVSEI 55
           P   P+  +    L+HIK A+R +GYSE   +E+
Sbjct: 273 PNPAPNLAVATQLLEHIKVAMRGSGYSETVTNEV 306


>AE014297-936|ABI31152.1|  550|Drosophila melanogaster CG8144-PK,
           isoform K protein.
          Length = 550

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 22  PGTPPSAPITQHTLDHIKGALRQAGYSEAGVSEI 55
           P   P+  +    L+HIK A+R +GYSE   +E+
Sbjct: 284 PNPAPNLAVATQLLEHIKVAMRGSGYSETVTNEV 317


>AE014297-935|ABI31155.1|  572|Drosophila melanogaster CG8144-PH,
           isoform H protein.
          Length = 572

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 22  PGTPPSAPITQHTLDHIKGALRQAGYSEAGVSEI 55
           P   P+  +    L+HIK A+R +GYSE   +E+
Sbjct: 306 PNPAPNLAVATQLLEHIKVAMRGSGYSETVTNEV 339


>AE014297-934|ABI31153.1|  572|Drosophila melanogaster CG8144-PG,
           isoform G protein.
          Length = 572

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 22  PGTPPSAPITQHTLDHIKGALRQAGYSEAGVSEI 55
           P   P+  +    L+HIK A+R +GYSE   +E+
Sbjct: 306 PNPAPNLAVATQLLEHIKVAMRGSGYSETVTNEV 339


>AE014297-933|AAF54380.2|  572|Drosophila melanogaster CG8144-PF,
           isoform F protein.
          Length = 572

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 22  PGTPPSAPITQHTLDHIKGALRQAGYSEAGVSEI 55
           P   P+  +    L+HIK A+R +GYSE   +E+
Sbjct: 306 PNPAPNLAVATQLLEHIKVAMRGSGYSETVTNEV 339


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.322    0.141    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,910,771
Number of Sequences: 52641
Number of extensions: 249227
Number of successful extensions: 449
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 433
Number of HSP's gapped (non-prelim): 16
length of query: 166
length of database: 24,830,863
effective HSP length: 80
effective length of query: 86
effective length of database: 20,619,583
effective search space: 1773284138
effective search space used: 1773284138
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 58 (27.5 bits)