GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000797-TA|BGIBMGA000797-PA|undefined
         (166 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   2.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   2.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   6.3  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    21   8.3  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    21   8.3  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 11/31 (35%), Positives = 13/31 (41%)

Query: 92  QDPPAVFGPLAQVSLGLPLIGLNIDPPRPRD 122
           Q  PA  G L+    G P +     P  PRD
Sbjct: 67  QKIPAWIGELSATKFGFPCLQYTQLPVNPRD 97


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 11/31 (35%), Positives = 13/31 (41%)

Query: 92  QDPPAVFGPLAQVSLGLPLIGLNIDPPRPRD 122
           Q  PA  G L+    G P +     P  PRD
Sbjct: 67  QKIPAWIGELSATKFGFPCLQYTQLPVNPRD 97


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)

Query: 24  TPPSAPITQHTLDHIK 39
           TPPSA +   T+ H++
Sbjct: 299 TPPSATLVGTTITHLR 314


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 7/16 (43%), Positives = 12/16 (75%)

Query: 148 ILSHKLIRNRFYVCLI 163
           IL++  +RN++Y C I
Sbjct: 35  ILANDRLRNQYYDCFI 50


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 7/16 (43%), Positives = 12/16 (75%)

Query: 148 ILSHKLIRNRFYVCLI 163
           IL++  +RN++Y C I
Sbjct: 35  ILANDRLRNQYYDCFI 50


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.141    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,469
Number of Sequences: 429
Number of extensions: 1837
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 166
length of database: 140,377
effective HSP length: 53
effective length of query: 113
effective length of database: 117,640
effective search space: 13293320
effective search space used: 13293320
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 41 (20.6 bits)