Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000796-TA|BGIBMGA000796-PA|IPR004088|KH, type 1,
IPR004087|KH
(157 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1263 + 35316083-35316185,35317167-35317220,35317665-353179... 57 8e-09
08_01_0080 + 566509-566746,566904-567151,567347-567532,567639-56... 48 5e-06
10_08_0493 + 18299885-18299892,18300201-18300837,18301254-183016... 46 1e-05
03_03_0131 - 14706123-14706171,14706364-14706422,14706504-147067... 43 1e-04
06_02_0257 - 13533689-13533714,13533799-13533925,13534013-135341... 42 2e-04
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 42 3e-04
08_01_0673 - 5805218-5805349,5805936-5806026,5806416-5806471,580... 41 4e-04
03_05_0388 + 23726957-23727418,23730016-23730262,23731072-237312... 40 0.001
02_01_0198 + 1334563-1334994,1335872-1335919,1336096-1336351,133... 38 0.004
12_02_0998 + 25126114-25126596,25129213-25129339,25129349-251294... 38 0.005
09_04_0618 + 18988614-18989102,18989913-18990314,18990555-189908... 37 0.009
01_01_0956 + 7505206-7505322,7505860-7506723,7506841-7507260,750... 36 0.015
10_08_0511 + 18435745-18436499,18436624-18436742,18436788-184373... 36 0.020
02_01_0703 + 5251901-5251950,5252783-5253554 36 0.020
06_03_0766 - 24425486-24426245,24430766-24430855,24430951-244310... 35 0.035
04_04_1500 + 34010819-34011016,34013267-34013308,34014195-340142... 33 0.11
10_08_0948 + 21754985-21755290,21756042-21756297,21756845-217569... 32 0.18
02_04_0256 + 21331396-21332268 30 0.75
10_08_0962 + 21880919-21880983,21881100-21881487,21881807-218819... 30 0.99
03_06_0185 + 32193769-32194617 29 1.7
03_06_0356 + 33350365-33350707,33351683-33351799,33352663-33352790 28 4.0
12_01_0366 + 2779754-2779882,2780007-2780047,2780163-2780212,278... 27 5.3
12_01_0433 - 3402250-3402536,3402644-3403030,3403523-3403957,340... 27 7.0
10_07_0195 + 13972656-13972970,13973518-13973848,13975312-139754... 27 7.0
05_07_0057 - 27386081-27386164,27386317-27386379,27386584-273866... 27 9.2
>02_05_1263 +
35316083-35316185,35317167-35317220,35317665-35317903,
35317989-35318089,35318390-35318583,35318885-35319003,
35319624-35319749,35320081-35320142,35320265-35320348,
35320580-35320664
Length = 388
Score = 56.8 bits (131), Expect = 8e-09
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 7/106 (6%)
Query: 3 VKILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQIS-QKAKELSLQERCITVVGEKESNKK 61
V+++VPNS+ G IIGKGG+ IK E S + ++IS Q + L +R +TV G + +
Sbjct: 145 VRLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKISPQDNNFVGLHDRLVTVTGPLDHQMR 204
Query: 62 ACLMILQKVVDD---PQSGSCPNVSYADVAGPVANYNPTGSPYAVP 104
A +IL K+ +D P + S P YA + P P G Y +P
Sbjct: 205 AIYLILSKLSEDVHYPPNLSSP-FPYAGLGFPSYPGVPVG--YMIP 247
Score = 47.6 bits (108), Expect = 5e-06
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 3 VKILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKEL-SLQERCITVVGEKESNKK 61
++ LV N+ AG IIGKGG+ I + + QSG+ +Q+S+ + +R I V G + K
Sbjct: 61 LRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVIK 120
Query: 62 ACLMILQKVVDDPQSGS 78
A +IL+K++ + + +
Sbjct: 121 AMELILEKLLAEGEESN 137
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 13 GMIIGKGGNYIKQIKEQSGSYVQISQKAKELS-LQERCITVVGEKESNKKACLMILQKV 70
G ++G+ G I +I + SG+ ++IS + ++ ER +T+ G E+ + A MI+Q+V
Sbjct: 297 GAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTITGTSEAIQAAESMIMQRV 355
>08_01_0080 +
566509-566746,566904-567151,567347-567532,567639-567734,
567836-567907,567990-568106,570531-571676
Length = 700
Score = 47.6 bits (108), Expect = 5e-06
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQ-ISQKAKE-LSLQERCITVVGEKESNKK 61
++LVP++ G+IIGKGG IK ++ +SG+ +Q I Q E ++L ER + + G K+ +
Sbjct: 249 EMLVPDNKVGLIIGKGGETIKTLQTRSGARIQLIPQHPPEGVTLTERTVRITGNKKQIEA 308
Query: 62 ACLMILQ 68
A MI Q
Sbjct: 309 AKDMIKQ 315
Score = 46.4 bits (105), Expect = 1e-05
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 5 ILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAK-ELSLQERCITVVGEKESNKKAC 63
I VPN+ G++IGK G I+ ++ SG+ +QI++ A+ + + R + +VG ES KA
Sbjct: 156 INVPNNKVGVLIGKSGETIRNLQMNSGAKIQITKDAEADANAPTRSVELVGTLESIDKA- 214
Query: 64 LMILQKVVDDPQSGSCP 80
+++ V+ + +G P
Sbjct: 215 ERLIKNVIAEADAGGSP 231
>10_08_0493 +
18299885-18299892,18300201-18300837,18301254-18301676,
18301769-18302014,18302124-18302789,18303228-18303283,
18303367-18303460,18303559-18303738
Length = 769
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/117 (23%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Query: 1 MFVKILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQI--SQKAKELSLQ-ERCITVVGEKE 57
+ +ILVP + G ++GKGG+ I+Q++ +G+ +++ S+ + +L+ + + + G
Sbjct: 162 VIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSS 221
Query: 58 SNKKACLMILQKVVDDPQSGSCPNVSYADVAGPVANYNPTGSPYAVPTAEVKEVTHA 114
+KA I ++ P+ + P D + + P P+A P V H+
Sbjct: 222 LVRKALYEISTRLHQHPRKDNPPLEEIIDASTQRKHQAPPQLPHANPMLPHLHVDHS 278
Score = 42.7 bits (96), Expect = 1e-04
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 3 VKILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKELSLQERCITVVGEK 56
+KIL + G +IGK G ++Q+++Q+G+ VQ+ + K S +ER I V ++
Sbjct: 304 IKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNAS-EERLIVVSSQE 356
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKA---KELSLQERCITVVG 54
+++VP++ G IIG+GG I +++ ++G+ +++ KA K LS E + V G
Sbjct: 388 RLVVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAG 441
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/59 (20%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKELSLQERCITVVGEKESNKKA 62
+IL P G ++G+GG+ +K +++ + + ++++ ER I + ++A
Sbjct: 56 RILCPVKKIGSVLGRGGDIVKALRDTTKAKIRVADSIP--GADERVIIIFNYSSQTEEA 112
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 3 VKILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQ 38
V+ +PNS +IG GG + +I++ SG+ V++ +
Sbjct: 685 VEFRIPNSYLESVIGAGGVNLAEIRQISGARVKLHE 720
>03_03_0131 -
14706123-14706171,14706364-14706422,14706504-14706770,
14706857-14707114,14707207-14707629,14707942-14708514
Length = 542
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/75 (26%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 3 VKILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQI--SQKAKELSLQ-ERCITVVGEKESN 59
V++LVP+ G IIGKGG+ I+ I+ +G+++++ ++ ++ + + + G+
Sbjct: 140 VRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENLPACAISGDELLQISGDSTVV 199
Query: 60 KKACLMILQKVVDDP 74
+KA L + ++ D+P
Sbjct: 200 RKALLQVSSRLHDNP 214
Score = 42.7 bits (96), Expect = 1e-04
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Query: 3 VKILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKELSLQERCITVVGEKE 57
+++L S G +IGKGG IKQI+++SG+++++ + ++ CI V KE
Sbjct: 282 LRLLCAASNVGGVIGKGGGIIKQIRQESGAFIKVDSS----NTEDDCIITVSAKE 332
Score = 34.7 bits (76), Expect = 0.035
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQK---AKELSLQERCITVVGEKESNK 60
++LV S G +IGKGG+ I +I+ S + ++I K K + E + + G+ + +
Sbjct: 368 RLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQISGDLDVVR 427
Query: 61 KACLMILQKV 70
A L I ++
Sbjct: 428 HALLQITTRL 437
Score = 31.9 bits (69), Expect = 0.24
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKELSLQERCITVV-GEKESN 59
+ L P+ G IIG+GG KQ++ + + ++I + ER IT+ +E+N
Sbjct: 43 RYLCPSRKIGSIIGRGGEIAKQMRADTQAKIRIGESVS--GCDERVITIFSSSRETN 97
>06_02_0257 -
13533689-13533714,13533799-13533925,13534013-13534121,
13534193-13534272,13534758-13534979,13536070-13536318,
13537032-13537484,13539834-13540556
Length = 662
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKE----LSLQERCITVVGEKESN 59
+++VP G ++GKGG I+Q++ ++ ++++I + + +SL E + VVGE
Sbjct: 190 RLIVPRLHVGCLLGKGGKIIEQMRAETKTHIRILPRDQHTPRCVSLSEEVVQVVGEGNCV 249
Query: 60 KKACLMILQKV 70
KKA +I ++
Sbjct: 250 KKAVAIISDRL 260
Score = 30.7 bits (66), Expect = 0.56
Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 3 VKILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKELSLQERCITVVGEKESNKKA 62
+++++P S + + G+ + QI E SG+ V ++ + + E+ + + G E KA
Sbjct: 587 LEVVIPKSAVASLTMRAGSKLAQISEMSGATVTLADERPDAI--EKVVRISGTPEQADKA 644
Query: 63 CLMI---LQKVVDDPQSG 77
++ + + DD SG
Sbjct: 645 QSLLQGFILSIQDDIPSG 662
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 41.5 bits (93), Expect = 3e-04
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 5 ILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKEL-SLQERCITVVGEKESNKKAC 63
I +PN G+IIGK G IK ++ QSG+ +Q+++ L Q R + + G + +A
Sbjct: 168 IEIPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGTPDQISRA- 226
Query: 64 LMILQKVVDDPQSGSCPNVS 83
++ +V+ + + S N+S
Sbjct: 227 EQLINEVLAEADAASSGNLS 246
Score = 35.1 bits (77), Expect = 0.026
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 7 VPNSTAGMIIGKGGNYIKQIKEQSGSYVQI--SQKAKELSLQERCITVVGEKESNKKACL 64
+ N+ G++IGKGG IK ++ +SG+ +Q+ ER + + G +E + A
Sbjct: 264 IANNKVGLVIGKGGETIKSMQAKSGARIQVVPLHLPPGDPATERTVYIDGTQEQIETAKQ 323
Query: 65 MILQKVVDDPQSGSCPNV 82
++++ V + QS P V
Sbjct: 324 LVIE--VTNVQSSLAPIV 339
>08_01_0673 -
5805218-5805349,5805936-5806026,5806416-5806471,
5806571-5806852,5806924-5807057,5807088-5807163,
5807247-5807747,5808454-5809037,5809579-5809597
Length = 624
Score = 41.1 bits (92), Expect = 4e-04
Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 1 MFVKILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKELSLQERCITVVGEKESN- 59
+ +++L P G++IGKGG IK I+++SG+ + + + +E IT+ + ++
Sbjct: 315 LVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKND--REESIITITSNEATDD 372
Query: 60 -KKA---CLMILQKVVDDPQSG 77
K A +++LQ ++D G
Sbjct: 373 AKSAAVEAVLLLQSKINDDNEG 394
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 13 GMIIGKGGNYIKQI--KEQSGSYVQISQKAKELSLQERCITVVGEKESNKKACLMILQKV 70
G +IGKGG+ + + K ++ Y+ +K ++ S + + V GE E+ + A + I+ ++
Sbjct: 398 GCLIGKGGSIVNDMRSKTKAAIYISKGEKPRKASSSDELVEVFGEVENLRDALVQIVLRL 457
Query: 71 VDD 73
DD
Sbjct: 458 RDD 460
Score = 34.3 bits (75), Expect = 0.046
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 5 ILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQK 39
ILVP S + +IGK G IK+++ S +++++S K
Sbjct: 149 ILVPASQSASVIGKSGAVIKRLRSTSKAFIKVSPK 183
Score = 31.1 bits (67), Expect = 0.43
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQI 36
+IL P+ G +IGK G I I++Q+ + V++
Sbjct: 52 RILCPDRVIGNVIGKNGKVINSIRQQTSAKVKV 84
>03_05_0388 +
23726957-23727418,23730016-23730262,23731072-23731220,
23731313-23731597,23731665-23731889,23734251-23734445
Length = 520
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKELSL-QERCITVVGEKESNKKA 62
++LVP S AG +IGK G IK I++ S S V+I + ++L +R + + GE +KA
Sbjct: 203 RLLVPASQAGSLIGKQGATIKSIQDSSKSIVRIVETLPLVALNDDRVVEIQGEPVGVQKA 262
Score = 31.9 bits (69), Expect = 0.24
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQI 36
+IL+P G IIG+ G +IK++ E+S + ++I
Sbjct: 111 RILIPAQKVGAIIGRKGEFIKKMCEESKARIKI 143
Score = 29.1 bits (62), Expect = 1.7
Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 3/95 (3%)
Query: 7 VPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKELSLQERCITVVGEKESNKKACLMI 66
+P S A +IG G I I+ SG+ V I + + E + ++G + A ++
Sbjct: 398 IPLSYADAVIGAAGASISYIRRHSGATVTIQESRG--APGEMTVEIIGSASQVQTAQQLV 455
Query: 67 LQKVVDDPQSGSCPNVSYADVAGPVANYNPTGSPY 101
+ + PQ G P S +Y PY
Sbjct: 456 QNFMAEAPQ-GPPPPASNPPAPAVDLSYGSYPPPY 489
>02_01_0198 +
1334563-1334994,1335872-1335919,1336096-1336351,
1336733-1336881,1336969-1337097,1337425-1337592,
1338416-1338610
Length = 458
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKELS---LQERCITVVG 54
K+LVP++ A +IGK G IK I+E +G+ V+I K + LS + ER + + G
Sbjct: 210 KLLVPSAQATHLIGKQGVRIKSIQETTGATVKIIDKVELLSYDVVDERIVDIHG 263
>12_02_0998 +
25126114-25126596,25129213-25129339,25129349-25129459,
25130122-25130270,25130356-25130643,25130753-25130941,
25131445-25131619,25132219-25132316
Length = 539
Score = 37.5 bits (83), Expect = 0.005
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKELSL-QERCITVVGEKESNKKA 62
++LVP S AG +IGK G IK I++ S ++I + ++L +R + + GE KA
Sbjct: 207 RLLVPASQAGSLIGKQGATIKSIQDASKCVLRILESVPPVALSDDRVVEIQGEPLDVHKA 266
Query: 63 CLMI 66
+I
Sbjct: 267 VELI 270
Score = 31.5 bits (68), Expect = 0.32
Identities = 12/33 (36%), Positives = 23/33 (69%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQI 36
+ILVP G +IG+ G +IK++ E+S + +++
Sbjct: 118 RILVPAQKVGAVIGRKGEFIKKMCEESRARIKV 150
>09_04_0618 +
18988614-18989102,18989913-18990314,18990555-18990806,
18991564-18991941,18992350-18992426,18992700-18992808,
18993424-18993574,18993810-18993903,18997072-18997474,
18997590-18997742,18998115-18998474
Length = 955
Score = 36.7 bits (81), Expect = 0.009
Identities = 16/76 (21%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKEL----SLQERCITVVGEKESN 59
++L + G ++GKGG +++++++SG+ +++ + +L + + I + G +
Sbjct: 112 RMLAASGQVGCVLGKGGKTVERMRQESGAQIRVFRNRDQLPPWAAPVDELIHISGNFSAV 171
Query: 60 KKACLMILQKVVDDPQ 75
+KA L++ + D+P+
Sbjct: 172 RKALLLVTTCLQDNPR 187
Score = 34.7 bits (76), Expect = 0.035
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQI---SQKAKELSLQERCITVVGEKESNK 60
++LVP+ G ++GKGG+ I ++++ +G+ ++I Q + + + V G +S +
Sbjct: 331 RLLVPSQHIGCLLGKGGSIIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQ 390
Query: 61 KACLMILQKVVD 72
A L I ++ D
Sbjct: 391 DALLHITGRIRD 402
Score = 32.3 bits (70), Expect = 0.18
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKELSLQERCITVVGEKES 58
+++ N G IIGKGG+ I+ ++ ++G+ ++I + + +ER I + + S
Sbjct: 247 RMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSD--SEERVIVISAHENS 299
>01_01_0956 +
7505206-7505322,7505860-7506723,7506841-7507260,
7508091-7508342,7508696-7508953,7509798-7509877,
7509959-7510070,7510492-7510541,7511070-7511171,
7511215-7511276,7511888-7511928
Length = 785
Score = 35.9 bits (79), Expect = 0.015
Identities = 13/35 (37%), Positives = 25/35 (71%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQ 38
+IL P S +G +IGKGG I +I++++G +++ +
Sbjct: 91 RILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDE 125
Score = 34.7 bits (76), Expect = 0.035
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 3 VKILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKELSL--QERCITVVGEKESNK 60
+++LV +S G ++GK G+ IKQ+ S +++S+ L ++ + GE +S +
Sbjct: 277 LRLLVLDSQVGWLLGKNGSVIKQMSTDSCCEIRVSKDKLPLCALPRDELCQITGELDSVR 336
Query: 61 KACLMILQKVVDDPQSGS 78
K + Q + P S
Sbjct: 337 KGLNTVAQLLFTHPPKES 354
Score = 34.7 bits (76), Expect = 0.035
Identities = 19/86 (22%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQK---AKELSLQERCITVVGEKESNK 60
+++V + G ++GKGG+ I ++++ SG+++ + K K + + + + G E+ +
Sbjct: 501 RLIVSPNQVGCLLGKGGSIIAEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQ 560
Query: 61 KACLMILQKVVD----DPQSGSCPNV 82
+A + I ++ + D + + PNV
Sbjct: 561 EALMQITARLRNHLFRDRMASTVPNV 586
Score = 31.9 bits (69), Expect = 0.24
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQI 36
++L + G IIGKGGN IK I+ +G +++
Sbjct: 417 RLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKV 449
>10_08_0511 +
18435745-18436499,18436624-18436742,18436788-18437372,
18438534-18438667,18439128-18439148,18439656-18439739,
18439832-18440077,18440763-18440925,18441024-18441066,
18441392-18441773,18442212-18442267,18442351-18442417,
18442542-18442721
Length = 944
Score = 35.5 bits (78), Expect = 0.020
Identities = 15/50 (30%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKA---KELSLQERCI 50
+++VP++ G I+G+GG I +++ ++G+ +++ KA K LS E +
Sbjct: 598 RLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELV 647
>02_01_0703 + 5251901-5251950,5252783-5253554
Length = 273
Score = 35.5 bits (78), Expect = 0.020
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKELSLQERCITVVGEKESNKKAC 63
KI V S AG IIG+GG KQI +G+ + I + +L+ I + G + K A
Sbjct: 147 KISVDASLAGGIIGRGGVNTKQISRVTGAKLAIRDHESDTNLKN--IELEGTFDQIKNAS 204
Query: 64 LMILQKVVD----DPQSGSCPNVSYADVAGPVANY 94
M+ + +V P G P GP +N+
Sbjct: 205 AMVRELIVSIGGGAPPQGKKPVGGSHRGGGPGSNF 239
>06_03_0766 -
24425486-24426245,24430766-24430855,24430951-24431070,
24431568-24431746,24432046-24432231,24432454-24432547,
24432679-24432743,24433652-24433987
Length = 609
Score = 34.7 bits (76), Expect = 0.035
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKELSLQERCITVVGEKESNKKAC 63
KI V S AG IIGKGG K I +G+ + I +L+ I + G + K A
Sbjct: 484 KISVDASLAGGIIGKGGTNTKHISRMTGAKLAIRDNESNPNLKN--IELEGTFDQIKHAS 541
Query: 64 LMILQKVV 71
M+ + +V
Sbjct: 542 AMVTELIV 549
>04_04_1500 +
34010819-34011016,34013267-34013308,34014195-34014204,
34014526-34014586,34014621-34014678,34015266-34015412,
34015643-34016205,34018942-34019728
Length = 621
Score = 33.1 bits (72), Expect = 0.11
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKELSLQERCITVVGEKESNKKAC 63
KI V S AG IIGKGG KQI +G V++S + E + I + G + K+A
Sbjct: 491 KISVDASLAGGIIGKGGVNTKQICRVTG--VKLSIRDHESDSNLKNIELEGNFDQIKQAS 548
Query: 64 LMILQKVVD-DPQSGSCPNVSYADVAGPVANYNPTG 98
M+ + + P + + A A P P G
Sbjct: 549 NMVGELIATISPSTPAKKPAGSAAGAAPAGRGGPGG 584
>10_08_0948 +
21754985-21755290,21756042-21756297,21756845-21756999,
21757077-21757349,21757582-21757776,21757867-21758058
Length = 458
Score = 32.3 bits (70), Expect = 0.18
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQ-ISQKAKELSL----QERCITVVGEKES 58
++LVP + A +IGK G IK I+E +G+ ++ IS +E ER + + GE E
Sbjct: 152 RLLVPGAQAINLIGKQGASIKAIQEGTGATIRVISIDERERPFYVIEDERIVEIQGETEK 211
Query: 59 NKKA 62
KA
Sbjct: 212 VLKA 215
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/54 (27%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKELSLQERCITVVGEKE 57
+++VP G IIG+ G IK++ E++ + V++ + + ER + V G+++
Sbjct: 59 RLVVPVLKVGSIIGRKGELIKRLVEETKAKVRVLE--GPVGATERIVLVSGKED 110
>02_04_0256 + 21331396-21332268
Length = 290
Score = 30.3 bits (65), Expect = 0.75
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 3 VKILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKELSLQERCITVV 53
V++++ +S A + +K +S + +IS K KEL+ + RC+ VV
Sbjct: 154 VRLILVDSIASLFRADFDASPADLKRRSALFFRISAKLKELAHRHRCVVVV 204
>10_08_0962 +
21880919-21880983,21881100-21881487,21881807-21881931,
21882374-21882374,21882891-21883115,21888956-21889083,
21889176-21889227,21890205-21890351,21890444-21890566,
21890648-21890722,21890812-21890931,21892546-21892632,
21893115-21893183,21893262-21893353,21893465-21893584,
21893725-21893767,21893848-21893910,21894091-21894162,
21894247-21894291,21894354-21894424,21894508-21894573,
21894715-21894799
Length = 753
Score = 29.9 bits (64), Expect = 0.99
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 4 KILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKELSLQERCITVV---GEKESNK 60
+I VP G++IG GG IK+ K ++I + +LQE ++ V E +
Sbjct: 673 EISVPMEKVGLVIGSGGATIKKYKVYLEHLLRIYIQGVSQALQEGLLSGVLKTREPRAKN 732
Query: 61 KACLMIL 67
K +MIL
Sbjct: 733 KVPMMIL 739
>03_06_0185 + 32193769-32194617
Length = 282
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 63 CLMILQKVVDDPQSGSCPNVSYADVAGPVANYNPTGSPYAVPTAEVK 109
C + L DDP+ +C N+SYA + G + + Y+ T ++
Sbjct: 170 CSLPLPPFFDDPEHKACSNISYAVIDGTRICISSATATYSFDTVALE 216
>03_06_0356 +
33350365-33350707,33351683-33351799,33352663-33352790
Length = 195
Score = 27.9 bits (59), Expect = 4.0
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 36 ISQKAKELSLQERCITVVGEKESNKKACLMILQKVVDDPQSGSCPNVSYA 85
+ +KA + C +G+ + K CL +L K D+P G NV+ A
Sbjct: 48 VEEKATARAPTRDCCAGLGQVVAGSKKCLCVLVKDRDEPALGFRINVTRA 97
>12_01_0366 +
2779754-2779882,2780007-2780047,2780163-2780212,
2780824-2780968,2781298-2781354,2781448-2781571,
2781798-2782259,2782493-2782564
Length = 359
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 80 PNVSYADVAGPVANYNPTGSPYAVPTAEVKEVTHAH 115
P+ S A + P +++ PT SP+ +A+ + H
Sbjct: 260 PSSSSASLVAPASSFMPTASPFHPTSADAHRPAYGH 295
>12_01_0433 - 3402250-3402536,3402644-3403030,3403523-3403957,
3404071-3404562,3404718-3404821,3404913-3404994,
3405085-3405441,3405532-3406089,3406376-3406479,
3406575-3406650,3406764-3406898,3407192-3407494,
3407581-3408345,3409459-3412591,3412763-3412882
Length = 2445
Score = 27.1 bits (57), Expect = 7.0
Identities = 18/78 (23%), Positives = 35/78 (44%)
Query: 35 QISQKAKELSLQERCITVVGEKESNKKACLMILQKVVDDPQSGSCPNVSYADVAGPVANY 94
Q + KA+E S +VVG E+N++ C + ++ + P + D++G +
Sbjct: 2058 QSATKAREESAFSEGESVVGSCETNEQRCQVDCKEENEHKADQVTPCIPTFDLSGAASTK 2117
Query: 95 NPTGSPYAVPTAEVKEVT 112
G +P A++ T
Sbjct: 2118 GSEGGITLLPDAKLSVFT 2135
>10_07_0195 +
13972656-13972970,13973518-13973848,13975312-13975463,
13975573-13976280,13976424-13976615,13977264-13977425
Length = 619
Score = 27.1 bits (57), Expect = 7.0
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 1 MFVKILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKELSLQERCITVVGEKESNK 60
+ +K+ VP A +IG G I I++ SGS V I K+L I + G ++
Sbjct: 503 VIMKMQVPIFYAEAVIGPTGARIDYIRQASGSSVVI----KDLDDSAMSIEITGSAATDV 558
Query: 61 KACLMILQKVVDDPQSGSCPNVSY 84
+ +++ + + + S P+ SY
Sbjct: 559 QIAEQLIKNFMAEAAAAS-PDHSY 581
>05_07_0057 -
27386081-27386164,27386317-27386379,27386584-27386637,
27386768-27386881,27386965-27387192
Length = 180
Score = 26.6 bits (56), Expect = 9.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 39 KAKELSLQERCITVVGEKESNKKAC 63
K K S + C T+VG KE++ KAC
Sbjct: 152 KKKPESWRLACQTIVGNKENSGKAC 176
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.133 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,106,446
Number of Sequences: 37544
Number of extensions: 142134
Number of successful extensions: 330
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 273
Number of HSP's gapped (non-prelim): 57
length of query: 157
length of database: 14,793,348
effective HSP length: 76
effective length of query: 81
effective length of database: 11,940,004
effective search space: 967140324
effective search space used: 967140324
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 56 (26.6 bits)
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