Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000795-TA|BGIBMGA000795-PA|undefined
(79 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8IGS7 Cluster: RE36563p; n=13; Endopterygota|Rep: RE36... 67 7e-11
UniRef50_UPI00015B4E06 Cluster: PREDICTED: similar to CG8144-PK;... 62 2e-09
UniRef50_Q5C3W7 Cluster: SJCHGC08372 protein; n=1; Schistosoma j... 48 3e-05
UniRef50_Q1WDR2 Cluster: Nova; n=3; Echinoida|Rep: Nova - Parace... 42 0.003
UniRef50_UPI0000EB479F Cluster: RNA-binding protein Nova-2 (Neur... 41 0.005
UniRef50_A7SKT2 Cluster: Predicted protein; n=1; Nematostella ve... 40 0.007
UniRef50_P51513 Cluster: RNA-binding protein Nova-1; n=41; Eutel... 40 0.007
UniRef50_Q9UNW9 Cluster: RNA-binding protein Nova-2; n=13; Amnio... 40 0.010
UniRef50_Q8K568 Cluster: NOVA-1 variant 4; n=2; Euarchontoglires... 39 0.017
UniRef50_Q6GPZ4 Cluster: Nova1 protein; n=4; Xenopus|Rep: Nova1 ... 38 0.039
UniRef50_UPI0000DB7567 Cluster: PREDICTED: similar to CG3249-PA,... 35 0.36
UniRef50_Q9GRY9 Cluster: Putative uncharacterized protein; n=2; ... 35 0.36
UniRef50_A7RWL2 Cluster: Predicted protein; n=1; Nematostella ve... 33 1.5
UniRef50_Q2HWF9 Cluster: Organic solvent tolerance protein; n=6;... 31 3.4
UniRef50_UPI000049A2F9 Cluster: hypothetical protein 207.t00015;... 31 4.4
UniRef50_Q5JEC7 Cluster: Putative uncharacterized protein; n=1; ... 30 7.8
UniRef50_Q668C6 Cluster: Multidrug resistance protein mdtB; n=13... 30 7.8
>UniRef50_Q8IGS7 Cluster: RE36563p; n=13; Endopterygota|Rep:
RE36563p - Drosophila melanogaster (Fruit fly)
Length = 605
Score = 66.9 bits (156), Expect = 7e-11
Identities = 31/55 (56%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 17 TMERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKMPQDRDKQVIVI 71
T ER CLITGS E IMVV++FIM+KI+EKP+L + D+K Q+RDKQV ++
Sbjct: 144 TTERVCLITGSTEAIMVVMEFIMDKIREKPDLTNKIVD-TDSKQTQERDKQVKIL 197
>UniRef50_UPI00015B4E06 Cluster: PREDICTED: similar to CG8144-PK;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG8144-PK - Nasonia vitripennis
Length = 442
Score = 62.5 bits (145), Expect = 2e-09
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 17 TMERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDT-KMPQDRDKQVIVI 71
T ER CLITGSV+ IM V+DFIMEKI+EKP+L D+ K +RDKQV ++
Sbjct: 90 TTERVCLITGSVDAIMAVMDFIMEKIREKPDLTTKTTVDFDSGKATAERDKQVKIL 145
>UniRef50_Q5C3W7 Cluster: SJCHGC08372 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08372 protein - Schistosoma
japonicum (Blood fluke)
Length = 160
Score = 48.4 bits (110), Expect = 3e-05
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 17 TMERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKMPQDRDKQVIVI 71
T ER CLI G+ E I+ V +I EK+ EKPE + G + ++P +R KQV ++
Sbjct: 88 TTERVCLIVGTTESILRVFQYISEKVYEKPESIA--KTGCEGRIPTERHKQVKIL 140
>UniRef50_Q1WDR2 Cluster: Nova; n=3; Echinoida|Rep: Nova -
Paracentrotus lividus (Common sea urchin)
Length = 553
Score = 41.5 bits (93), Expect = 0.003
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 17 TMERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKMPQDRDKQVIVI 71
T ER L+TG VE + V F++EKIKE P+L G +T +R +QV ++
Sbjct: 119 TQERVALLTGPVESLNNVAVFVLEKIKESPQL--GVKAGAETITSPERARQVKIV 171
>UniRef50_UPI0000EB479F Cluster: RNA-binding protein Nova-2
(Neuro-oncological ventral antigen 2) (Astrocytic
NOVA1-like RNA-binding protein).; n=2; Canis lupus
familiaris|Rep: RNA-binding protein Nova-2
(Neuro-oncological ventral antigen 2) (Astrocytic
NOVA1-like RNA-binding protein). - Canis familiaris
Length = 432
Score = 40.7 bits (91), Expect = 0.005
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 17 TMERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKMPQ-----DRDKQVI 69
T ER CL+ G+ E + V FI EK++E P+ + PE V+ PQ DR KQ I
Sbjct: 87 TTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTK-PEVVNILQPQTTMNPDRAKQTI 143
>UniRef50_A7SKT2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 390
Score = 40.3 bits (90), Expect = 0.007
Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 17 TMERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKMPQDRDKQVIVI 71
T ER LI G VE I+ +LDF+++KI+++P+ +K + ++R KQ+ +I
Sbjct: 91 TQERIGLIMGEVENIVQMLDFVIDKIRQEPQGIK---ASMSISFDRERAKQMKII 142
>UniRef50_P51513 Cluster: RNA-binding protein Nova-1; n=41;
Euteleostomi|Rep: RNA-binding protein Nova-1 - Homo
sapiens (Human)
Length = 510
Score = 40.3 bits (90), Expect = 0.007
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 17 TMERACLITGSVEGIMVVLDFIMEKIKEKPE-LVKPFPEGV---DTKMPQDRDKQVI 69
T ER CLI G+VE + V FI EKI+E P+ + K P + T + DR KQ +
Sbjct: 98 TTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTL 154
>UniRef50_Q9UNW9 Cluster: RNA-binding protein Nova-2; n=13;
Amniota|Rep: RNA-binding protein Nova-2 - Homo sapiens
(Human)
Length = 492
Score = 39.9 bits (89), Expect = 0.010
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 17 TMERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKMPQ-----DRDKQVIVI 71
T ER CL+ G+ E + V FI EK++E P+ + PE V+ PQ DR KQ +I
Sbjct: 78 TTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTK-PEVVNILQPQTTMNPDRAKQAKLI 136
>UniRef50_Q8K568 Cluster: NOVA-1 variant 4; n=2;
Euarchontoglires|Rep: NOVA-1 variant 4 - Rattus
norvegicus (Rat)
Length = 81
Score = 39.1 bits (87), Expect = 0.017
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 17 TMERACLITGSVEGIMVVLDFIMEKIKEKPE-LVKPFPEGV---DTKMPQDRDKQ 67
T ER CLI G++E + V FI EKI+E P+ + K P + T + DR KQ
Sbjct: 4 TTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQ 58
>UniRef50_Q6GPZ4 Cluster: Nova1 protein; n=4; Xenopus|Rep: Nova1
protein - Xenopus laevis (African clawed frog)
Length = 413
Score = 37.9 bits (84), Expect = 0.039
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 17 TMERACLITGSVEGIMVVLDFIMEKIKEKPE 47
T ER CL+ GS E ++ V +FI EK++E P+
Sbjct: 79 TTERVCLVQGSAEALLSVHNFIAEKVREVPQ 109
>UniRef50_UPI0000DB7567 Cluster: PREDICTED: similar to CG3249-PA,
isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar
to CG3249-PA, isoform A - Apis mellifera
Length = 542
Score = 34.7 bits (76), Expect = 0.36
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 3 KADIFVISIDKRVSTMERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKMPQ 62
KA++ ++ V ++ C I GS EGI + LD I +K EK + + K+P+
Sbjct: 268 KAEVHIVVKRHPVWRDQKICAIEGSAEGINIALDMIRQKFPEKKYPHVTLEQILPLKIPE 327
Query: 63 D 63
+
Sbjct: 328 E 328
>UniRef50_Q9GRY9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 413
Score = 34.7 bits (76), Expect = 0.36
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 17 TMERACLITGSVEGIMVVLDFIMEKIKEK 45
T ER CL+ G + IM V++ I +KI+EK
Sbjct: 87 TSERICLVKGRLNNIMAVIESIQDKIREK 115
>UniRef50_A7RWL2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 589
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 13 KRVSTMERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKMPQDRDKQVIVIT 72
KR+S + LI V+ + VLD +M K +E + P +DT + DR+ ++
Sbjct: 162 KRISYLMENFLIFVCVQSLQRVLDMMMRKKREMADSESQLPPQIDTVLLLDRNVDLLTPL 221
Query: 73 FDMI 76
F +
Sbjct: 222 FTQL 225
>UniRef50_Q2HWF9 Cluster: Organic solvent tolerance protein; n=6;
Helicobacter|Rep: Organic solvent tolerance protein -
Helicobacter pylori (Campylobacter pylori)
Length = 660
Score = 31.5 bits (68), Expect = 3.4
Identities = 13/53 (24%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 5 DIFVISIDKRVSTMERACLITGSV-----EGIMVVLDFIMEKIKEKPELVKPF 52
D+++++ R T + L+ G++ EG+++ D++ + EK E++ PF
Sbjct: 60 DVYILADKVRYDTKTKEALLEGNIKVYKGEGLLIKTDYVKLSLNEKYEIIFPF 112
>UniRef50_UPI000049A2F9 Cluster: hypothetical protein 207.t00015;
n=2; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 207.t00015 - Entamoeba histolytica HM-1:IMSS
Length = 354
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 15 VSTMERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKMPQDRDKQ 67
+ +ME ++ G +E +++FI +KI+EK + K F + KM +++DK+
Sbjct: 174 IISMELKEIVIGVIEK-SGIMEFIKKKIEEKNQEFKSFCNEIIFKMQENKDKE 225
>UniRef50_Q5JEC7 Cluster: Putative uncharacterized protein; n=1;
Thermococcus kodakarensis KOD1|Rep: Putative
uncharacterized protein - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 351
Score = 30.3 bits (65), Expect = 7.8
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 11 IDKRVSTMERACLITGSVEGIMVVLDFIMEKIKEKP-ELVKPFPEGVDTKMPQDRDKQV 68
++ R+ST+E+ L SVE I+ ++ + EK++ P EL K K+ ++ K V
Sbjct: 102 LEDRISTLEQRTLFMDSVEAIIPRMNELEEKLEGLPAELYKRLEGAYSQKLDEEMRKIV 160
>UniRef50_Q668C6 Cluster: Multidrug resistance protein mdtB; n=136;
Proteobacteria|Rep: Multidrug resistance protein mdtB -
Yersinia pseudotuberculosis
Length = 1052
Score = 30.3 bits (65), Expect = 7.8
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 40 EKIKEK-PELVKPFPEGVDTKMPQDRDKQVIVITFDMIFEI 79
+ I+E PEL+K P+ VD K+ DR + D+ FE+
Sbjct: 307 DSIREMLPELIKSLPKSVDVKVLTDRTSTIRASVNDVQFEL 347
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.324 0.141 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,570,313
Number of Sequences: 1657284
Number of extensions: 2405512
Number of successful extensions: 8639
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 8623
Number of HSP's gapped (non-prelim): 19
length of query: 79
length of database: 575,637,011
effective HSP length: 58
effective length of query: 21
effective length of database: 479,514,539
effective search space: 10069805319
effective search space used: 10069805319
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 65 (30.3 bits)
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