GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000795-TA|BGIBMGA000795-PA|undefined
         (79 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    19   6.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    19   6.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    19   8.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    19   8.3  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 19.0 bits (37), Expect = 6.3
 Identities = 10/46 (21%), Positives = 24/46 (52%)

Query: 28   VEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKMPQDRDKQVIVITF 73
            +  + V++ F++   K+   L  PF   V+    +D+++  + IT+
Sbjct: 1232 LNSLYVIVIFLLTLKKDLLHLDWPFDPKVNFTYFEDKNEIGVYITY 1277


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 19.0 bits (37), Expect = 6.3
 Identities = 10/46 (21%), Positives = 24/46 (52%)

Query: 28   VEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKMPQDRDKQVIVITF 73
            +  + V++ F++   K+   L  PF   V+    +D+++  + IT+
Sbjct: 1232 LNSLYVIVIFLLTLKKDLLHLDWPFDPKVNFTYFEDKNEIGVYITY 1277


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 18.6 bits (36), Expect = 8.3
 Identities = 5/16 (31%), Positives = 11/16 (68%)

Query: 62  QDRDKQVIVITFDMIF 77
           +D D  V++ TF++ +
Sbjct: 308 EDTDTLVVIYTFNLFY 323


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 18.6 bits (36), Expect = 8.3
 Identities = 5/16 (31%), Positives = 11/16 (68%)

Query: 62  QDRDKQVIVITFDMIF 77
           +D D  V++ TF++ +
Sbjct: 264 EDTDTLVVIYTFNLFY 279


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.324    0.141    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,512
Number of Sequences: 317
Number of extensions: 537
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 79
length of database: 114,650
effective HSP length: 46
effective length of query: 33
effective length of database: 100,068
effective search space:  3302244
effective search space used:  3302244
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.7 bits)
S2: 36 (18.6 bits)