Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000795-TA|BGIBMGA000795-PA|undefined
(79 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U04840-1|AAA16022.1| 510|Homo sapiens onconeural ventral antige... 40 0.001
BC075039-1|AAH75039.1| 507|Homo sapiens neuro-oncological ventr... 40 0.001
BC075038-1|AAH75038.1| 507|Homo sapiens neuro-oncological ventr... 40 0.001
U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like RNA-... 40 0.001
AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nov... 40 0.001
AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nov... 40 0.001
BC007504-1|AAH07504.1| 712|Homo sapiens leucine-rich repeats an... 29 3.0
AL589765-15|CAI17177.1| 561|Homo sapiens tudor and KH domain co... 28 5.2
AL589765-14|CAI17176.1| 557|Homo sapiens tudor and KH domain co... 28 5.2
AL589765-13|CAI17175.1| 516|Homo sapiens tudor and KH domain co... 28 5.2
AF227192-1|AAF36701.1| 561|Homo sapiens tudor and KH domain-con... 28 5.2
AF119121-1|AAD30971.1| 606|Homo sapiens putative RNA binding pr... 28 5.2
>U04840-1|AAA16022.1| 510|Homo sapiens onconeural ventral antigen-1
protein.
Length = 510
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 17 TMERACLITGSVEGIMVVLDFIMEKIKEKPE-LVKPFPEGV---DTKMPQDRDKQVI 69
T ER CLI G+VE + V FI EKI+E P+ + K P + T + DR KQ +
Sbjct: 98 TTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTL 154
>BC075039-1|AAH75039.1| 507|Homo sapiens neuro-oncological ventral
antigen 1 protein.
Length = 507
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 17 TMERACLITGSVEGIMVVLDFIMEKIKEKPE-LVKPFPEGV---DTKMPQDRDKQVI 69
T ER CLI G+VE + V FI EKI+E P+ + K P + T + DR KQ +
Sbjct: 95 TTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTL 151
>BC075038-1|AAH75038.1| 507|Homo sapiens neuro-oncological ventral
antigen 1 protein.
Length = 507
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 17 TMERACLITGSVEGIMVVLDFIMEKIKEKPE-LVKPFPEGV---DTKMPQDRDKQVI 69
T ER CLI G+VE + V FI EKI+E P+ + K P + T + DR KQ +
Sbjct: 95 TTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTL 151
>U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like
RNA-binding protein protein.
Length = 498
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 17 TMERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKMPQ-----DRDKQVIVI 71
T ER CL+ G+ E + V FI EK++E P+ + PE V+ PQ DR KQ +I
Sbjct: 84 TTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTK-PEVVNILQPQTTMNPDRAKQAKLI 142
>AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nova-2
protein.
Length = 492
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 17 TMERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKMPQ-----DRDKQVIVI 71
T ER CL+ G+ E + V FI EK++E P+ + PE V+ PQ DR KQ +I
Sbjct: 78 TTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTK-PEVVNILQPQTTMNPDRAKQAKLI 136
>AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nova-2
[AA 29-492] protein.
Length = 464
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 17 TMERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKMPQ-----DRDKQVIVI 71
T ER CL+ G+ E + V FI EK++E P+ + PE V+ PQ DR KQ +I
Sbjct: 50 TTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTK-PEVVNILQPQTTMNPDRAKQAKLI 108
>BC007504-1|AAH07504.1| 712|Homo sapiens leucine-rich repeats and
calponin homology (CH) domain containing 3 protein.
Length = 712
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 34 VLDFIMEKIKEKPELVKPFPEGVDTKMP 61
VLDF+ +K + P+ P +GVD + P
Sbjct: 505 VLDFVKQKASQSPQKQHPLLDGVDGECP 532
>AL589765-15|CAI17177.1| 561|Homo sapiens tudor and KH domain
containing protein.
Length = 561
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 18 MERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKMPQ 62
+ R I+G+ + + I+EK+ E EL K +T++P+
Sbjct: 170 LSRLIKISGTQKEVAAAKHLILEKVSEDEELRKRIAHSAETRVPR 214
>AL589765-14|CAI17176.1| 557|Homo sapiens tudor and KH domain
containing protein.
Length = 557
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 18 MERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKMPQ 62
+ R I+G+ + + I+EK+ E EL K +T++P+
Sbjct: 166 LSRLIKISGTQKEVAAAKHLILEKVSEDEELRKRIAHSAETRVPR 210
>AL589765-13|CAI17175.1| 516|Homo sapiens tudor and KH domain
containing protein.
Length = 516
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 18 MERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKMPQ 62
+ R I+G+ + + I+EK+ E EL K +T++P+
Sbjct: 125 LSRLIKISGTQKEVAAAKHLILEKVSEDEELRKRIAHSAETRVPR 169
>AF227192-1|AAF36701.1| 561|Homo sapiens tudor and KH
domain-containing protein protein.
Length = 561
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 18 MERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKMPQ 62
+ R I+G+ + + I+EK+ E EL K +T++P+
Sbjct: 170 LSRLIKISGTQKEVAAAKHLILEKVSEDEELRKRIAHSAETRVPR 214
>AF119121-1|AAD30971.1| 606|Homo sapiens putative RNA binding
protein protein.
Length = 606
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 18 MERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKMPQ 62
+ R I+G+ + + I+EK+ E EL K +T++P+
Sbjct: 170 LSRLIKISGTQKEVAAAKHLILEKVSEDEELRKRIAHSAETRVPR 214
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.324 0.141 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,510,793
Number of Sequences: 224733
Number of extensions: 312635
Number of successful extensions: 911
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 896
Number of HSP's gapped (non-prelim): 15
length of query: 79
length of database: 73,234,838
effective HSP length: 58
effective length of query: 21
effective length of database: 60,200,324
effective search space: 1264206804
effective search space used: 1264206804
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 57 (27.1 bits)
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