Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000795-TA|BGIBMGA000795-PA|undefined
(79 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g13650.2 68418.m01585 elongation factor family protein contai... 28 0.90
At5g13650.1 68418.m01584 elongation factor family protein contai... 28 0.90
At3g45090.2 68416.m04862 2-phosphoglycerate kinase-related conta... 28 0.90
At3g45090.1 68416.m04863 2-phosphoglycerate kinase-related conta... 28 0.90
At5g06970.1 68418.m00789 expressed protein 27 1.2
At1g73920.2 68414.m08561 lipase family protein similar to lipase... 27 1.2
At1g73920.1 68414.m08560 lipase family protein similar to lipase... 27 1.2
At5g57580.1 68418.m07194 calmodulin-binding protein similar to c... 26 2.7
At5g05890.1 68418.m00649 UDP-glucoronosyl/UDP-glucosyl transfera... 26 3.6
At2g23220.1 68415.m02773 cytochrome P450, putative 25 4.8
At1g18460.1 68414.m02303 lipase family protein similar to triacy... 25 4.8
At5g60760.1 68418.m07623 2-phosphoglycerate kinase-related conta... 25 6.3
At4g12300.1 68417.m01948 cytochrome P450 family protein flavonoi... 25 6.3
At2g34620.1 68415.m04253 mitochondrial transcription termination... 25 6.3
At4g12310.1 68417.m01949 cytochrome P450, putative similar to P4... 25 8.4
At2g27040.1 68415.m03249 PAZ domain-containing protein / piwi do... 25 8.4
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 27.9 bits (59), Expect = 0.90
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 11 IDKRVSTMERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKMPQDRDKQVIV 70
+++ ++ ++ L+ SVEG M F+++K E V +D P R + V+
Sbjct: 163 VERVLNMVDGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKID--RPSARPEFVVN 220
Query: 71 ITFDMIFEI 79
TF++ E+
Sbjct: 221 STFELFIEL 229
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 27.9 bits (59), Expect = 0.90
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 11 IDKRVSTMERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKMPQDRDKQVIV 70
+++ ++ ++ L+ SVEG M F+++K E V +D P R + V+
Sbjct: 162 VERVLNMVDGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKID--RPSARPEFVVN 219
Query: 71 ITFDMIFEI 79
TF++ E+
Sbjct: 220 STFELFIEL 228
>At3g45090.2 68416.m04862 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 698
Score = 27.9 bits (59), Expect = 0.90
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 2 SKADIFVISIDKRVSTMERACLITGSVEGIMVVLDFIMEKIKEKPELVKPF 52
+++++ + S+D+ ++T E VEG+ + L+F+M +K+ P +V PF
Sbjct: 255 AQSEMVIDSLDRLITTWEERNESV-VVEGVHLSLNFVMGLMKKHPSIV-PF 303
>At3g45090.1 68416.m04863 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 717
Score = 27.9 bits (59), Expect = 0.90
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 2 SKADIFVISIDKRVSTMERACLITGSVEGIMVVLDFIMEKIKEKPELVKPF 52
+++++ + S+D+ ++T E VEG+ + L+F+M +K+ P +V PF
Sbjct: 274 AQSEMVIDSLDRLITTWEERNESV-VVEGVHLSLNFVMGLMKKHPSIV-PF 322
>At5g06970.1 68418.m00789 expressed protein
Length = 1101
Score = 27.5 bits (58), Expect = 1.2
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 7 FVISIDKRVSTMERACLITGSVEGIMVVLDFIMEKIKEKPELVKPFP 53
F + + R ++E + L G V + +MEK+ K +LV P P
Sbjct: 761 FALKVPMR--SIELSALFRGIDNAFQVYTNHVMEKLASKDDLVPPVP 805
>At1g73920.2 68414.m08561 lipase family protein similar to lipase
GB:CAA74737 [SP|O46108] from [Drosophila melanogaster]
Length = 635
Score = 27.5 bits (58), Expect = 1.2
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 10 SIDKRVSTME--RACLITGSVEGIMVVLDFIMEKIKEKP 46
+ID+ ++ E + C I S+ G +++ I KIKEKP
Sbjct: 355 NIDEEINQEEPYKLCAICHSLGGAAILMYVITRKIKEKP 393
>At1g73920.1 68414.m08560 lipase family protein similar to lipase
GB:CAA74737 [SP|O46108] from [Drosophila melanogaster]
Length = 704
Score = 27.5 bits (58), Expect = 1.2
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 10 SIDKRVSTME--RACLITGSVEGIMVVLDFIMEKIKEKP 46
+ID+ ++ E + C I S+ G +++ I KIKEKP
Sbjct: 424 NIDEEINQEEPYKLCAICHSLGGAAILMYVITRKIKEKP 462
>At5g57580.1 68418.m07194 calmodulin-binding protein similar to
calmodulin-binding protein TCB60 GI:1698548 from
[Nicotiana tabacum]
Length = 647
Score = 26.2 bits (55), Expect = 2.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 27 SVEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKM 60
+ EGI V DF+ +K+ P+L G+ KM
Sbjct: 275 TAEGINTVEDFLRVMVKDSPKLRTILGSGMSNKM 308
>At5g05890.1 68418.m00649 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 455
Score = 25.8 bits (54), Expect = 3.6
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 1 MSKADIFVISIDKRVSTMERACLI-TGSVEG---IMVVLDFIMEKIKEKPELVKPFPE 54
+S++D+ I+ R S ++ GSV G I + + IMEK+ EK ++VK P+
Sbjct: 281 ISESDLIEIAWGLRNSDQPFLLVVRVGSVRGREWIETIPEEIMEKLNEKGKIVKWAPQ 338
>At2g23220.1 68415.m02773 cytochrome P450, putative
Length = 515
Score = 25.4 bits (53), Expect = 4.8
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 23 LITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKMPQDR 64
+I GS E I L++ M + PE++K +DTK+ DR
Sbjct: 313 IIAGS-ETIAWTLEWAMLNVLNHPEVLKKARTEIDTKIGFDR 353
>At1g18460.1 68414.m02303 lipase family protein similar to
triacylglycerol lipase, gastric precursor (EC 3.1.1.3)
{Canis familiaris} [SP|P80035]
Length = 701
Score = 25.4 bits (53), Expect = 4.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 20 RACLITGSVEGIMVVLDFIMEKIKEKP 46
+ C+++ S+ G V++ I KI+EKP
Sbjct: 434 KLCVVSHSLGGAAVLMYVITRKIEEKP 460
>At5g60760.1 68418.m07623 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 738
Score = 25.0 bits (52), Expect = 6.3
Identities = 13/51 (25%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 2 SKADIFVISIDKRVSTMERACLITGSVEGIMVVLDFIMEKIKEKPELVKPF 52
+++++ + ++D+ ++ E + VEG+ + L+F+M +K+ P +V PF
Sbjct: 298 AQSEMVIDNLDRLITAWEER-KESVIVEGVHLSLNFVMGLMKKHPSIV-PF 346
>At4g12300.1 68417.m01948 cytochrome P450 family protein flavonoid
3',5'-hydroxylase - Campanula medium, PID:d1003951
Length = 516
Score = 25.0 bits (52), Expect = 6.3
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 23 LITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKMPQD 63
++ G + ++F M ++ PEL+K E +D + +D
Sbjct: 311 MVVGGTDTSTNTIEFAMAELMSNPELIKRAQEELDEVVGKD 351
>At2g34620.1 68415.m04253 mitochondrial transcription termination
factor-related / mTERF-related contains Pfam profile
PF02536: mTERF
Length = 303
Score = 25.0 bits (52), Expect = 6.3
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 23 LITGSVEG-IMVVLDFIMEKIKEKPELVKPFPE 54
L T S+E LD+ M +IK K E +K FP+
Sbjct: 221 LFTFSIENNFKPKLDYFMSEIKGKLENLKEFPQ 253
>At4g12310.1 68417.m01949 cytochrome P450, putative similar to P450
monooxygenase GI:14334057 from [Gossypium arboreum ]
Length = 383
Score = 24.6 bits (51), Expect = 8.4
Identities = 9/41 (21%), Positives = 22/41 (53%)
Query: 23 LITGSVEGIMVVLDFIMEKIKEKPELVKPFPEGVDTKMPQD 63
++ G E ++F+M ++ PEL++ + +D + +D
Sbjct: 178 MVVGGTESSTNTIEFVMAELISNPELMRRAQQELDEVVGKD 218
>At2g27040.1 68415.m03249 PAZ domain-containing protein / piwi
domain-containing protein similar to SP|Q9QZ81
Eukaryotic translation initiation factor 2C 2 {Rattus
norvegicus}; contains Pfam profiles PF02171: Piwi
domain, PF02170: PAZ domain
Length = 924
Score = 24.6 bits (51), Expect = 8.4
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 33 VVLDFIMEKIKEKPELVKPFPEGVDTKMPQDRDKQVIVITFDMIFE 78
+++DF K KPE + F +GV + + QV+ I D I E
Sbjct: 721 LLVDFYTSSNKRKPEHIIIFRDGVS----ESQFNQVLNIELDQIIE 762
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.324 0.141 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,648,261
Number of Sequences: 28952
Number of extensions: 55013
Number of successful extensions: 240
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 232
Number of HSP's gapped (non-prelim): 16
length of query: 79
length of database: 12,070,560
effective HSP length: 58
effective length of query: 21
effective length of database: 10,391,344
effective search space: 218218224
effective search space used: 218218224
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 51 (24.6 bits)
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