Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000793-TA|BGIBMGA000793-PA|IPR005578|Hrf1
         (372 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   4.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   6.2  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)

Query: 164 MVKYDQDTPVQPRYDINAPDLYIPSM 189
           ++ YD  T  QP+  +NAP LY  SM
Sbjct: 199 IMSYDYHTADQPQTGLNAP-LYGNSM 223


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 11/23 (47%), Positives = 12/23 (52%)

Query: 319 ANPYSDAWDKPTPGGTKRRVYFL 341
           A P +DA D P P   KR  Y L
Sbjct: 519 AKPVADARDAPAPFLLKRENYTL 541


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.137    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,505
Number of Sequences: 317
Number of extensions: 3784
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 2
length of query: 372
length of database: 114,650
effective HSP length: 58
effective length of query: 314
effective length of database: 96,264
effective search space: 30226896
effective search space used: 30226896
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)