Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000793-TA|BGIBMGA000793-PA|IPR005578|Hrf1
(372 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70781-7|CAJ55254.1| 380|Caenorhabditis elegans Hypothetical pr... 166 3e-41
Z70781-6|CAA94831.2| 349|Caenorhabditis elegans Hypothetical pr... 166 3e-41
Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical p... 30 2.3
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 29 5.3
Z49868-4|CAA90030.1| 184|Caenorhabditis elegans Hypothetical pr... 28 9.3
AF042389-1|AAC08940.1| 184|Caenorhabditis elegans FMRFamide-lik... 28 9.3
>Z70781-7|CAJ55254.1| 380|Caenorhabditis elegans Hypothetical
protein F57A8.2b protein.
Length = 380
Score = 166 bits (403), Expect = 3e-41
Identities = 101/264 (38%), Positives = 143/264 (54%), Gaps = 29/264 (10%)
Query: 94 QISSMLQQPVVQDMAIQYGNQLAAQGKEAVQRELHKFVPVSRLRYYFAVDTRYVIRKLML 153
Q ++ P++ + A Q+G Q A Q KE +L K++ L+YYFAVD YV +KL +
Sbjct: 90 QPQQLMSDPML-NAAKQFGGQFAEQQKE----KLTKYLGTFNLKYYFAVDNAYVGKKLGI 144
Query: 154 IVFPYTHKEWMVKYDQDT-PVQPRYDINAPDLYIPSMGYVTYVLLAGFMLGLQHRFSPEQ 212
+ FP+ HK+W +K+ P R D+NAPDLYIP M ++TY+L++GF+LG Q RFSPE
Sbjct: 145 LFFPFFHKDWSLKFAGSADPAPAREDVNAPDLYIPLMSFLTYILVSGFVLGTQGRFSPEI 204
Query: 213 IGIQASSALAYIIFEMXXXXXXXXXXXXXXXXKTLDLLAYSGYKYTVMISSLLAGLLAGR 272
+GI S+AL ++I E LAYS YK+ MI LL ++ +
Sbjct: 205 LGILTSNALIWVILENIVIFISKYILNISQSLSVWHSLAYSTYKFAHMIVCLLLFMVGDK 264
Query: 273 TGYYCGLLYSSCALSYFLVKTLRLQLLSGSQGPEQPSYGFPNPPYAANPYSDAWDKPTPG 332
T YY L YSS AL FL++++ + S G SYG +
Sbjct: 265 TFYYGALAYSSLALVIFLLRSVS-HFMFDSSG----SYG------------------SEE 301
Query: 333 GTKRRVYFLLFVAITQPLLCWWLT 356
G KR++ + FV ITQPL+ WWLT
Sbjct: 302 GRKRKLILVAFVVITQPLIMWWLT 325
>Z70781-6|CAA94831.2| 349|Caenorhabditis elegans Hypothetical
protein F57A8.2a protein.
Length = 349
Score = 166 bits (403), Expect = 3e-41
Identities = 101/264 (38%), Positives = 143/264 (54%), Gaps = 29/264 (10%)
Query: 94 QISSMLQQPVVQDMAIQYGNQLAAQGKEAVQRELHKFVPVSRLRYYFAVDTRYVIRKLML 153
Q ++ P++ + A Q+G Q A Q KE +L K++ L+YYFAVD YV +KL +
Sbjct: 90 QPQQLMSDPML-NAAKQFGGQFAEQQKE----KLTKYLGTFNLKYYFAVDNAYVGKKLGI 144
Query: 154 IVFPYTHKEWMVKYDQDT-PVQPRYDINAPDLYIPSMGYVTYVLLAGFMLGLQHRFSPEQ 212
+ FP+ HK+W +K+ P R D+NAPDLYIP M ++TY+L++GF+LG Q RFSPE
Sbjct: 145 LFFPFFHKDWSLKFAGSADPAPAREDVNAPDLYIPLMSFLTYILVSGFVLGTQGRFSPEI 204
Query: 213 IGIQASSALAYIIFEMXXXXXXXXXXXXXXXXKTLDLLAYSGYKYTVMISSLLAGLLAGR 272
+GI S+AL ++I E LAYS YK+ MI LL ++ +
Sbjct: 205 LGILTSNALIWVILENIVIFISKYILNISQSLSVWHSLAYSTYKFAHMIVCLLLFMVGDK 264
Query: 273 TGYYCGLLYSSCALSYFLVKTLRLQLLSGSQGPEQPSYGFPNPPYAANPYSDAWDKPTPG 332
T YY L YSS AL FL++++ + S G SYG +
Sbjct: 265 TFYYGALAYSSLALVIFLLRSVS-HFMFDSSG----SYG------------------SEE 301
Query: 333 GTKRRVYFLLFVAITQPLLCWWLT 356
G KR++ + FV ITQPL+ WWLT
Sbjct: 302 GRKRKLILVAFVVITQPLIMWWLT 325
>Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical
protein T22H6.6a protein.
Length = 1405
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 287 SYFLVKTLRLQLLSGSQGPEQPSYGFPNPPYAANPYSDAWDKPTPGGTKRRVY 339
++F LR + S P QPS P PP + P SD +P P R++
Sbjct: 65 AFFNPDILRNLNIQKSSPPNQPSDDVP-PPQTSQPSSDTTAEPLPSPAATRIH 116
>Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical
protein T22H6.6a protein.
Length = 1405
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 287 SYFLVKTLRLQLLSGSQGPEQPSYGFPNPPYAANPYSDAWDKPTPGGTKRRVY 339
++F LR + S P QPS P PP + P SD +P P R++
Sbjct: 65 AFFNPDILRNLNIQKSSPPNQPSDDVP-PPQTSQPSSDTTAEPLPSPAATRIH 116
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 301 GSQGPEQPSYGFPNPPYAA 319
G+QGP SYG P PP A+
Sbjct: 1062 GAQGPPPASYGAPTPPQAS 1080
>Z49868-4|CAA90030.1| 184|Caenorhabditis elegans Hypothetical
protein W07E11.2 protein.
Length = 184
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 2 TCQFSKREPPLVGPSGAIRKAKRVSDVAAMGT 33
T +F KR P P G +R KR S+ A GT
Sbjct: 92 TMRFGKRNPENDTPFGTMRFGKRASEDALFGT 123
>AF042389-1|AAC08940.1| 184|Caenorhabditis elegans FMRFamide-like
peptide 3 protein.
Length = 184
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 2 TCQFSKREPPLVGPSGAIRKAKRVSDVAAMGT 33
T +F KR P P G +R KR S+ A GT
Sbjct: 92 TMRFGKRNPENDTPFGTMRFGKRASEDALFGT 123
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.137 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,598,159
Number of Sequences: 27539
Number of extensions: 352041
Number of successful extensions: 749
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 738
Number of HSP's gapped (non-prelim): 9
length of query: 372
length of database: 12,573,161
effective HSP length: 82
effective length of query: 290
effective length of database: 10,314,963
effective search space: 2991339270
effective search space used: 2991339270
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)
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