GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000793-TA|BGIBMGA000793-PA|IPR005578|Hrf1
         (372 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    25   1.4  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   9.7  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)

Query: 354 WLTYHLVASPPGEGAGPAR 372
           W TY     P G  AGPA+
Sbjct: 395 WFTYQETVDPAGCNAGPAK 413


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 9.7
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 1/36 (2%)

Query: 277 CGLLYSSCALSYFLVKTLRLQLLSGSQGPEQ-PSYG 311
           CG+     AL Y+L  T       G  GP+  P +G
Sbjct: 9   CGIAVLFLALYYYLTSTFDFWKSRGVVGPKPVPFFG 44


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.137    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,463
Number of Sequences: 429
Number of extensions: 4791
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 2
length of query: 372
length of database: 140,377
effective HSP length: 59
effective length of query: 313
effective length of database: 115,066
effective search space: 36015658
effective search space used: 36015658
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)