Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000791-TA|BGIBMGA000791-PA|IPR002219|Protein kinase C,
phorbol ester/diacylglycerol binding, IPR001849|Pleckstrin-like,
IPR000719|Protein kinase, IPR011009|Protein kinase-like,
IPR008271|Serine/threonine protein kinase, active site,
IPR002290|Serine/threonine protein kinase
         (627 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...   121   2e-29
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...   120   4e-29
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                88   2e-19
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    66   1e-12
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    65   2e-12
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    65   2e-12
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    65   2e-12
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    23   9.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   9.9  

>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score =  121 bits (291), Expect = 2e-29
 Identities = 61/154 (39%), Positives = 93/154 (60%), Gaps = 3/154 (1%)

Query: 455 VAQILVALKHLHEKNIVHCDLKPENVLLSTDDEFPQVKLCDFGFA-RIIGEKSFRRSVVG 513
           + QIL ++ H H   +VH DLKPEN+LL++  +   VKL DFG A  + GE        G
Sbjct: 15  IQQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEAQAWFGFAG 74

Query: 514 TPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPF-NEDED-INEQIQNAAFMYPPA 571
           TP YL+PEVL+ + Y + +D+W+ GVI+Y+ L G  PF +ED+  +  QI+  ++ YP  
Sbjct: 75  TPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKTGSYDYPSP 134

Query: 572 PWREISAEAIDLINNLLQVKQRKRLSVDKSTPEP 605
            W  ++ EA +LIN +L V   KR++  ++   P
Sbjct: 135 EWDTVTPEAKNLINQMLTVNPSKRITASEALKHP 168


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score =  120 bits (289), Expect = 4e-29
 Identities = 85/260 (32%), Positives = 136/260 (52%), Gaps = 14/260 (5%)

Query: 347 QLYHIHPDEVLGSGQFGIV-YGGLHRRTDRPVAIKVIDKLRF-PTKQEAQLKNEVAILQN 404
           +L  + P   LG G FG V    +   + R  A+K + K +   T+Q+  + +E  I+  
Sbjct: 363 RLQDLRPLATLGVGGFGRVELVQIAGDSSRSFALKQMKKAQIVETRQQQHIMSEKRIMGE 422

Query: 405 LSHPGVVNLERMFETPERIFVVMEKLKGDMLEMILSHERGRLTERITKFLVAQILVALKH 464
                VV L + F+  + ++++ME   G  L  +L  ++G   +  T+F  A ++ A  +
Sbjct: 423 ADCDFVVKLFKTFKDRKYLYMLMEACLGGELWTVL-RDKGHFDDGTTRFYTACVVEAFDY 481

Query: 465 LHEKNIVHCDLKPENVLLSTDDEFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLR 524
           LH +NI++ DLKPEN+LL   D    VKL DFGFA+ +       +  GTP Y+APEV+ 
Sbjct: 482 LHSRNIIYRDLKPENLLL---DSQGYVKLVDFGFAKRLDHGRKTWTFCGTPEYVAPEVIL 538

Query: 525 NKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDI---NEQIQNA-AFMYPPAPWREISAEA 580
           NKG++ S D WS+GV+++  L+GT PF   + +   N  ++   A  +P    R I+  A
Sbjct: 539 NKGHDISADYWSLGVLMFELLTGTPPFTGGDPMKTYNIILKGIDAIEFP----RSITRNA 594

Query: 581 IDLINNLLQVKQRKRLSVDK 600
             LI  L +    +RL   K
Sbjct: 595 TALIKKLCRDNPAERLGYQK 614


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 87.8 bits (208), Expect = 2e-19
 Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 13/195 (6%)

Query: 357 LGSGQFGIVYGGLHRRTDRPVAIKVIDKLRFPTKQEAQLKNEVAILQNLSHPGVVNLERM 416
           LGSG FGIVY  L++     VA K+I      T++ + + N       L H  +V +  M
Sbjct: 73  LGSGGFGIVYKALYK--GEQVAAKIIQ-----TEKYSNMLNSEKHASFLKHSNIVKV-LM 124

Query: 417 FETPERIFVVMEKLKGDMLEMILSHERGRLTERITKFLVAQILVALKHLHEKNIVHCDLK 476
            E    + ++  +L G  L+  L        ERI   ++  I  AL+  H   IVH D+K
Sbjct: 125 IEQGASLSLITMELCGTTLQNRLDEAILIKNERIC--ILKSITCALQFCHNAGIVHADVK 182

Query: 477 PENVLLSTDDEFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWS 536
           P+N+L+S +    Q KL DFG + +IG  +      GTP Y APEV++      + D++S
Sbjct: 183 PKNILMSKNG---QPKLTDFGSSVLIGAPNEIDKFYGTPGYTAPEVIKQNRPTPAADIYS 239

Query: 537 VGVIIYVSLSGTFPF 551
           +G++ +  L    PF
Sbjct: 240 LGIVAWQMLFRKLPF 254


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 65.7 bits (153), Expect = 1e-12
 Identities = 60/235 (25%), Positives = 109/235 (46%), Gaps = 18/235 (7%)

Query: 350 HIHPDEVLGSGQFGIVYGGLHR-----RTDRPVAIKVIDKLRFPTKQEAQLKNEVAILQN 404
           +I  + ++G G+FG V  G  +     RT+  VAIK + K     K       E +I+  
Sbjct: 632 YITIEAIIGGGEFGDVCRGKLKLPPDGRTEIDVAIKTL-KPGSADKARNDFLTEASIMGQ 690

Query: 405 LSHPGVVNLERMFETPERIFVVMEKLKGDMLEMILSHERGRLTERITKFLVAQILVALKH 464
             HP V+ L+ +      + ++ E ++   L+  L    G+        ++  I   +++
Sbjct: 691 FEHPNVIFLQGVVTKSNPVMIITEFMENGSLDTFLRANDGKFQVLQLVGMLRGIASGMQY 750

Query: 465 LHEKNIVHCDLKPENVLLSTDDEFPQVKLCDFGFARII---GEKSFRRSVVGTPA-YLAP 520
           L E N VH DL   NVL++        K+ DFG +R I    E ++       P  + AP
Sbjct: 751 LAEMNYVHRDLAARNVLVNA---ALVCKIADFGLSREIESATEGAYTTRGGKIPVRWTAP 807

Query: 521 EVLRNKGYNRSLDMWSVGVIIYVSLS-GTFPF-N-EDEDINEQIQNAAFMYPPAP 572
           E +  + +  + D+WS+G++ +  +S G  P+ N  ++D+ + I+    +  PAP
Sbjct: 808 EAIAFRKFTSASDVWSMGIVCWEVMSYGERPYWNWSNQDVIKSIEKGYRL--PAP 860


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 64.9 bits (151), Expect = 2e-12
 Identities = 35/110 (31%), Positives = 66/110 (60%), Gaps = 8/110 (7%)

Query: 454 LVAQILVALKHLHEKNIVHCDLKPENVLLSTDDEFPQVKLCDFGFARIIGEKSFRRSVVG 513
           +   +L  +++LH + +VH D+K +NVLL  ++   + KL DFGF   I E     S+VG
Sbjct: 702 IALDVLEGIRYLHSQGLVHRDVKLKNVLLDIEN---RAKLTDFGFC--ITEVMMLGSIVG 756

Query: 514 TPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSG--TFPFNEDEDINEQI 561
           TP ++APE+L    Y+ S+D+++ G++ +   +G    P+  ++  N+++
Sbjct: 757 TPVHMAPELLSGH-YDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHNKEL 805


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 64.9 bits (151), Expect = 2e-12
 Identities = 35/110 (31%), Positives = 66/110 (60%), Gaps = 8/110 (7%)

Query: 454 LVAQILVALKHLHEKNIVHCDLKPENVLLSTDDEFPQVKLCDFGFARIIGEKSFRRSVVG 513
           +   +L  +++LH + +VH D+K +NVLL  ++   + KL DFGF   I E     S+VG
Sbjct: 740 IALDVLEGIRYLHSQGLVHRDVKLKNVLLDIEN---RAKLTDFGFC--ITEVMMLGSIVG 794

Query: 514 TPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSG--TFPFNEDEDINEQI 561
           TP ++APE+L    Y+ S+D+++ G++ +   +G    P+  ++  N+++
Sbjct: 795 TPVHMAPELLSGH-YDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHNKEL 843


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 64.9 bits (151), Expect = 2e-12
 Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 9/147 (6%)

Query: 373 TDRPVAIKVIDK--LRFPTKQEAQLKNEVAILQNLSHPGVVNLERMFETPERIFVVMEKL 430
           TD   AIK++ K  +      E  +  +  +  +   P +V L   F+T +R++ VME +
Sbjct: 8   TDELYAIKILKKDIIIQDDDVECTMVEKRVLALSTKPPFLVQLHSCFQTMDRLYFVMEYV 67

Query: 431 KGDMLEMILSHERGRLTERITKFLVAQILVALKHLHEKNIVHCDLKPENVLLSTDDEFPQ 490
            G  L M    + G+  E +  F  ++I + L  LH + IV+ DLK +NVLL  D     
Sbjct: 68  NGGDL-MYQIQQCGKFKEPVAVFYASEIAIGLFFLHGRGIVYRDLKLDNVLLDQDG---H 123

Query: 491 VKLCDFGFAR--IIGEKSFRRSVVGTP 515
           +K+ DFG  +  I G+K+  ++  GTP
Sbjct: 124 IKIADFGMCKEGISGDKT-TKTFCGTP 149


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 528 YNRSLDMWSVGVIIYV-SLSGTFPFNEDEDINEQIQ 562
           Y ++LD+W  G +++V +  G F   +  D+  Q++
Sbjct: 258 YVKALDVWMAGCMMFVFAALGEFVVVKVLDLRSQLE 293


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 9/15 (60%), Positives = 10/15 (66%)

Query: 485  DDEFPQVKLCDFGFA 499
            D  F  VKL DFGF+
Sbjct: 1405 DAHFKDVKLSDFGFS 1419


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.136    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,210
Number of Sequences: 429
Number of extensions: 6588
Number of successful extensions: 28
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 11
length of query: 627
length of database: 140,377
effective HSP length: 62
effective length of query: 565
effective length of database: 113,779
effective search space: 64285135
effective search space used: 64285135
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 46 (22.6 bits)