Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000790-TA|BGIBMGA000790-PA|IPR002219|Protein kinase C,
phorbol ester/diacylglycerol binding
(172 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17501| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 3e-30
SB_25040| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-08
SB_863| Best HMM Match : C2 (HMM E-Value=5.4e-36) 56 2e-08
SB_15740| Best HMM Match : SH2 (HMM E-Value=8.1e-18) 49 2e-06
SB_28412| Best HMM Match : C1_1 (HMM E-Value=5.5e-17) 44 5e-05
SB_10928| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 6e-04
SB_22391| Best HMM Match : C1_1 (HMM E-Value=3.6e-17) 40 8e-04
SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_37867| Best HMM Match : PH (HMM E-Value=0.0027) 33 0.13
SB_43370| Best HMM Match : RhoGAP (HMM E-Value=1.6e-18) 32 0.22
SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17) 32 0.22
SB_38521| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.29
SB_13363| Best HMM Match : COG2 (HMM E-Value=0.081) 31 0.39
SB_8000| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.90
SB_18526| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 2.7
SB_34111| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 6.3
SB_34562| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
>SB_17501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 819
Score = 128 bits (308), Expect = 3e-30
Identities = 67/151 (44%), Positives = 95/151 (62%), Gaps = 9/151 (5%)
Query: 9 FQLGVLRDAVSAPAHLLTLAHLKELAVKFVHEKIPDNGLNRLADRILLFRHDYCSPNVLQ 68
FQ G+ R++ LT LKELA F+ +K PD+G +AD++LLF HDY S N+L+
Sbjct: 12 FQCGLARESYGFEGKDLTA--LKELACSFLDQKFPDHGCVGVADKLLLFSHDYSSANILE 69
Query: 69 LLNSGTDVVDETLVEIVLTANPLICDVGTESLPLMRPHTLAVHSYKAPTFCDFCGEMLFG 128
L S + + T++E+V++A E + R H LAVHSYK+PTFCDFCG+ML+G
Sbjct: 70 RLTSVEQMKEGTVIEVVISAKV------PEDETIARSHQLAVHSYKSPTFCDFCGQMLYG 123
Query: 129 LVRQGLKCEGALYTY-VRPGHRLKRHLFDKK 158
LVRQGLKC+G + R +R++ + D K
Sbjct: 124 LVRQGLKCDGCGGNFHKRCAYRIRNNCSDSK 154
Score = 37.9 bits (84), Expect = 0.004
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 105 PHTLAVHSYKAPTFCDFCGEMLFGLVRQGLKC 136
PHT AVHSYK PT C C + L +++ + C
Sbjct: 216 PHTFAVHSYKKPTMCQIC-KRLVRTLKEHISC 246
>SB_25040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 456
Score = 56.4 bits (130), Expect = 1e-08
Identities = 22/40 (55%), Positives = 28/40 (70%)
Query: 98 ESLPLMRPHTLAVHSYKAPTFCDFCGEMLFGLVRQGLKCE 137
E + PH V++Y +PTFCD CG +L+GL RQGLKCE
Sbjct: 141 ERFNINMPHKFKVNNYLSPTFCDHCGSLLYGLFRQGLKCE 180
>SB_863| Best HMM Match : C2 (HMM E-Value=5.4e-36)
Length = 454
Score = 55.6 bits (128), Expect = 2e-08
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 98 ESLPLMRPHTLAVHSYKAPTFCDFCGEMLFGLVRQGLKC 136
E P+ PH H+YK+P FCD CG +L+G+ QGLKC
Sbjct: 25 EKNPVSSPHNFGPHTYKSPCFCDHCGSLLYGVYHQGLKC 63
>SB_15740| Best HMM Match : SH2 (HMM E-Value=8.1e-18)
Length = 453
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 94 DVGTESLPLMRPHTLAVHSYKAPTFCDFCGEMLFGLVRQGLKC 136
D+ +S P + H H YK P +CD CG+ ++GL QGLKC
Sbjct: 157 DIRKKSNPKVSVHDFKTHDYKQPKWCDICGKFMWGLKGQGLKC 199
>SB_28412| Best HMM Match : C1_1 (HMM E-Value=5.5e-17)
Length = 490
Score = 44.4 bits (100), Expect = 5e-05
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 104 RPHTLAVHSYKAPTFCDFCGEMLFGLVRQGLKCEGALYT 142
R H+ S + PT+CD CGE ++GL +Q ++C+ YT
Sbjct: 206 RGHSFLPFSLRNPTWCDLCGEFIWGLYKQAIRCKHCKYT 244
>SB_10928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 987
Score = 40.7 bits (91), Expect = 6e-04
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 89 NPLICDVGTESLPLMRPHTLAVHSYKAPTFCDFCGEMLFGLVRQGLKC 136
N V ++L H +Y +PT+CD CG +L G+++QG +C
Sbjct: 333 NSYFLKVNCQNLTREFSHNFQETTYFSPTYCDHCGGLLRGIIKQGCRC 380
>SB_22391| Best HMM Match : C1_1 (HMM E-Value=3.6e-17)
Length = 103
Score = 40.3 bits (90), Expect = 8e-04
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 106 HTLAVHSYKAPTFCDFCGEMLFGLVRQGLKCE 137
H H+++ P FC +C ++L G ++QG+KC+
Sbjct: 48 HEFVEHNFRKPQFCYYCNKLLKGFIKQGVKCK 79
>SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1161
Score = 37.5 bits (83), Expect = 0.006
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 106 HTLAVHSYKAPTFCDFCGEMLFGLVRQGLKCEGA 139
H +V ++ PT C+ C ++ GLVRQG CE +
Sbjct: 925 HKFSVRTFTTPTKCNQCTSLMIGLVRQGAICEAS 958
>SB_37867| Best HMM Match : PH (HMM E-Value=0.0027)
Length = 369
Score = 33.1 bits (72), Expect = 0.13
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 104 RPHTLAVHSYKAPTFCDFCGEMLFGLVRQG 133
+PH H + P+ CD+C +++ G V +G
Sbjct: 169 QPHNFVKHMFLTPSNCDYCLQLIIGFVSKG 198
>SB_43370| Best HMM Match : RhoGAP (HMM E-Value=1.6e-18)
Length = 865
Score = 32.3 bits (70), Expect = 0.22
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 106 HTLAVHSYKAPTFCDFCGEMLF----GLVRQGLKCEG 138
H +V + PTFC+ C +++ G+V QGL EG
Sbjct: 637 HKFSVTQFSIPTFCEHCNSLIWVLEKGMVCQGLYAEG 673
>SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17)
Length = 1440
Score = 32.3 bits (70), Expect = 0.22
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 106 HTLAVHSYKAPTFCDFCGEMLFGLVRQGLKC 136
H ++ H Y + TFC+ C +L+G+ QG +C
Sbjct: 241 HFVSTH-YTSTTFCNHCSNLLWGIGDQGYQC 270
>SB_38521| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 506
Score = 31.9 bits (69), Expect = 0.29
Identities = 32/109 (29%), Positives = 44/109 (40%), Gaps = 12/109 (11%)
Query: 66 VLQLLNSGTDVVDETLVEIVLTANPLICDVGTESLPLMRPHTLAVHSYKAPTFCDFCGE- 124
+ QLLNSG+ E+L + L NP D+G L H + S K T + C E
Sbjct: 66 IAQLLNSGSVTFHESLERLALVKNPNHLDIGNYCL-----HLEYLKSTKRNTLRN-CWEG 119
Query: 125 ---MLFGLVRQGLK--CEGALYTYVRPGHRLKRHLFDKKDLLMACQTID 168
L+RQ K C ++V PG R +AC +D
Sbjct: 120 RSVRASSLLRQLAKGGCAARRLSWVTPGFSQSRRCKTTASAKLACLQVD 168
>SB_13363| Best HMM Match : COG2 (HMM E-Value=0.081)
Length = 411
Score = 31.5 bits (68), Expect = 0.39
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 14 LRDAVSAPAHLLTLAHLKELAVKFVHEKIPDNGLNRLADRILLFRHDYCSPNVLQLLNSG 73
++DA +L ++ E+ + V P+NGL + +IL F YCS N+L + + G
Sbjct: 301 IKDAELLFREVLVKPYMNEIISEQVFLSDPENGLREIYTKILEFIPKYCS-NMLHITSGG 359
>SB_8000| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 30.3 bits (65), Expect = 0.90
Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 106 HTLAVHSYKAPTFCDFCGEMLFGLV-RQGLKCE 137
H + PTFC C + ++G++ +QG +C+
Sbjct: 133 HKFMATYLRQPTFCSHCNDFIWGVIGKQGYQCQ 165
>SB_18526| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 322
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 76 VVDETLVEIVLTANPLICD---VGTESLPLMRPHTLAVHSYKAPTFCDFCGE 124
+V ET + L+ P CD +G ++ H L +HS + P CD CG+
Sbjct: 35 IVKETSKALNLSEKPYKCDECGMGFNQSGALKRH-LRIHSGQKPYKCDECGK 85
>SB_34111| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 757
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 92 ICDVGTESLPLMRPHTLAVHSYKAPTFCDFCGE 124
IC G + ++ H + VH+ K P C CG+
Sbjct: 670 ICGKGFVNKGALKLHIVGVHTDKKPHQCQLCGK 702
>SB_34562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 978
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 103 MRPHTLAVHSYKAPTFCDFCGEMLFGL 129
+R HT ++H+ + P C+ CG FGL
Sbjct: 103 LRRHTKSIHNGEKPYKCEHCGR-YFGL 128
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.327 0.142 0.433
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,895,353
Number of Sequences: 59808
Number of extensions: 244023
Number of successful extensions: 651
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 630
Number of HSP's gapped (non-prelim): 25
length of query: 172
length of database: 16,821,457
effective HSP length: 77
effective length of query: 95
effective length of database: 12,216,241
effective search space: 1160542895
effective search space used: 1160542895
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 57 (27.1 bits)
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