GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000790-TA|BGIBMGA000790-PA|IPR002219|Protein kinase C,
phorbol ester/diacylglycerol binding
         (172 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   2.1  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   8.6  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              21   8.6  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.6  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 1/32 (3%)

Query: 93  CDVGTESLPLMRPHTLAVHSYKAPTFCDFCGE 124
           C  G      ++ HT   H+ + P  CD CG+
Sbjct: 209 CGKGFTCSKQLKVHT-RTHTGEKPYTCDICGK 239


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query: 79  ETLVEIVLTANPLICDV 95
           ET++++    + LICDV
Sbjct: 372 ETIIDVSRRRSSLICDV 388


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)

Query: 150 LKRHLFDKKDLLMAC 164
           +K+ +FDK D  +AC
Sbjct: 47  VKKGIFDKNDEKLAC 61


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query: 93  CDVGTESLPLMRPHTLAVHS 112
           C++ +ES+PL    T AV +
Sbjct: 799 CELTSESMPLQSALTAAVQT 818


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query: 93  CDVGTESLPLMRPHTLAVHS 112
           C++ +ES+PL    T AV +
Sbjct: 889 CELTSESMPLQSALTAAVQT 908


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.327    0.142    0.433 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,055
Number of Sequences: 429
Number of extensions: 1787
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 5
length of query: 172
length of database: 140,377
effective HSP length: 54
effective length of query: 118
effective length of database: 117,211
effective search space: 13830898
effective search space used: 13830898
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 41 (20.6 bits)