Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000789-TA|BGIBMGA000789-PA|undefined
         (95 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY168879-1|AAO12530.1| 1722|Homo sapiens SPA-1-like 2 protein.         27   7.1  
AL356965-2|CAH73409.1| 1722|Homo sapiens signal-induced prolifer...    27   7.1  
AL157409-2|CAI22920.1| 1722|Homo sapiens signal-induced prolifer...    27   7.1  

>AY168879-1|AAO12530.1| 1722|Homo sapiens SPA-1-like 2 protein.
          Length = 1722

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query: 40  DIMIHSELAGCHPVRRRRPSHARCHD 65
           DI +HS   G HP+R+R  S     D
Sbjct: 143 DIFVHSPQRGLHPIRQRSNSDVTISD 168


>AL356965-2|CAH73409.1| 1722|Homo sapiens signal-induced
           proliferation-associated 1 like 2 protein.
          Length = 1722

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query: 40  DIMIHSELAGCHPVRRRRPSHARCHD 65
           DI +HS   G HP+R+R  S     D
Sbjct: 143 DIFVHSPQRGLHPIRQRSNSDVTISD 168


>AL157409-2|CAI22920.1| 1722|Homo sapiens signal-induced
           proliferation-associated 1 like 2 protein.
          Length = 1722

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query: 40  DIMIHSELAGCHPVRRRRPSHARCHD 65
           DI +HS   G HP+R+R  S     D
Sbjct: 143 DIFVHSPQRGLHPIRQRSNSDVTISD 168


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.326    0.139    0.484 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,503,285
Number of Sequences: 224733
Number of extensions: 562151
Number of successful extensions: 1231
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1228
Number of HSP's gapped (non-prelim): 3
length of query: 95
length of database: 73,234,838
effective HSP length: 72
effective length of query: 23
effective length of database: 57,054,062
effective search space: 1312243426
effective search space used: 1312243426
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 57 (27.1 bits)