GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000789-TA|BGIBMGA000789-PA|undefined
         (95 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   1.5  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   1.5  

>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 15/63 (23%), Positives = 24/63 (38%)

Query: 6   SLASPIGHASIICILPKTGLNSYPTLLEVCAAYPDIMIHSELAGCHPVRRRRPSHARCHD 65
           S+AS  G +       ++ L      L  C     I + +E  G   ++ R P   +C  
Sbjct: 80  SVASTTGFSKECYCCRESYLKERHITLHHCYDADGIKLMNEENGVMEIKIREPVECKCIK 139

Query: 66  CHD 68
           C D
Sbjct: 140 CGD 142


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 15/63 (23%), Positives = 24/63 (38%)

Query: 6   SLASPIGHASIICILPKTGLNSYPTLLEVCAAYPDIMIHSELAGCHPVRRRRPSHARCHD 65
           S+AS  G +       ++ L      L  C     I + +E  G   ++ R P   +C  
Sbjct: 80  SVASTTGFSKECYCCRESYLKERHITLHHCYDADGIKLMNEENGVMEIKIREPVECKCIK 139

Query: 66  CHD 68
           C D
Sbjct: 140 CGD 142


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.326    0.139    0.484 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,211
Number of Sequences: 429
Number of extensions: 992
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 95
length of database: 140,377
effective HSP length: 49
effective length of query: 46
effective length of database: 119,356
effective search space:  5490376
effective search space used:  5490376
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.7 bits)
S2: 38 (19.4 bits)