GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000787-TA|BGIBMGA000787-PA|IPR001523|Paired box protein,
N-terminal, IPR009057|Homeodomain-like
         (199 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          28   0.17 
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       27   0.51 
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    24   2.7  
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    23   4.7  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   4.7  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    23   6.2  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   8.3  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   8.3  

>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 28.3 bits (60), Expect = 0.17
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 105 GIFAWEIRDRLLADGVCDKYNVP 127
           G+  WEI  R   DGV D+Y +P
Sbjct: 259 GLVLWEIARRCNVDGVYDEYQLP 281


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 26.6 bits (56), Expect = 0.51
 Identities = 9/29 (31%), Positives = 17/29 (58%)

Query: 105 GIFAWEIRDRLLADGVCDKYNVPSVSSIS 133
           G+  WE+  R ++ G+ ++Y VP    +S
Sbjct: 351 GLIFWEVCRRTISCGIAEEYKVPYFDYVS 379


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
            protease protein.
          Length = 1322

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 45   GIRPCDISRQLRVSHGCVSKILARYH 70
            G  P   S +L+  H C + ++ RYH
Sbjct: 1088 GHHPWQASLRLKTMHWCGAVLITRYH 1113


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 22  GVFVNGRPLPNAVRLRIVELAQ 43
           GVF  G P    VRLR+++ A+
Sbjct: 268 GVFPEGHPARTDVRLRVLQDAE 289


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 115 LLADGVCDKYNVPSVSSISRILRNK 139
           ++A  +C+ +N  S  SI+  LRNK
Sbjct: 580 VVALDICNAFNTASWQSIADALRNK 604


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
            protein.
          Length = 1322

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/26 (30%), Positives = 14/26 (53%)

Query: 45   GIRPCDISRQLRVSHGCVSKILARYH 70
            G  P   S +++  H C + ++ RYH
Sbjct: 1088 GHHPWQASLRVKTMHWCGAVLITRYH 1113


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 13/41 (31%), Positives = 14/41 (34%), Gaps = 5/41 (12%)

Query: 141 GGGAXXXXXXXXXXXXQRCWPLHQPYDYYVYLQGRQHGGGG 181
           GGG              R  PLHQP+          H GGG
Sbjct: 552 GGGGGGGGGVIGSGSTTRLPPLHQPFPMLA-----NHAGGG 587


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 73   GSILPGAIGGSKPRVTTPKVVSYIKQLKAK 102
            GSI    + G++ R+  P  V ++K L+ K
Sbjct: 1040 GSIFSTLLPGTQARLVPPDGVDFMKGLEVK 1069


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.142    0.444 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,221
Number of Sequences: 2123
Number of extensions: 6514
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 8
length of query: 199
length of database: 516,269
effective HSP length: 61
effective length of query: 138
effective length of database: 386,766
effective search space: 53373708
effective search space used: 53373708
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)