Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000786-TA|BGIBMGA000786-PA|IPR005225|Small GTP-binding
protein domain, IPR006689|ARF/SAR superfamily,
IPR006688|ADP-ribosylation factor, IPR006687|GTP-binding protein SAR1,
IPR003579|Ras small GTPase, Rab type
(184 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 118 4e-27
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 118 4e-27
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 116 9e-27
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 115 2e-26
02_02_0711 - 13180406-13180423,13180483-13180563,13181026-131811... 108 2e-24
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 108 3e-24
08_01_0921 + 9075409-9075511,9075606-9075689,9075744-9075806,907... 107 7e-24
07_01_0844 + 6855195-6855342,6855752-6855802,6856460-6856530,685... 100 6e-22
02_05_0413 + 28773869-28773925,28774045-28774135,28774515-287746... 100 6e-22
10_08_1062 + 22626262-22626318,22626404-22626494,22626601-226267... 99 2e-21
06_01_0098 + 818374-818427,818537-818627,818753-818868,818962-81... 97 7e-21
03_03_0224 + 15580944-15581036,15581630-15581770,15582385-155824... 81 7e-16
11_06_0218 + 21361975-21362314,21362463-21362545,21363870-213639... 77 1e-14
07_03_1298 - 25592788-25592890,25593126-25593229,25593747-255938... 77 1e-14
02_01_0226 + 1476529-1476585,1477207-1477297,1478247-1478362,147... 69 2e-12
03_02_0046 - 5255513-5255630,5255715-5255876,5256579-5256733,525... 61 6e-10
12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202 51 5e-07
01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024 50 1e-06
02_05_0639 - 30552148-30552265,30552362-30552523,30553177-305532... 49 3e-06
01_01_1068 - 8413269-8413589,8414011-8414262,8417472-8417603,841... 44 1e-04
06_01_0853 + 6486027-6486158,6486561-6486692,6486974-6486978,648... 41 7e-04
02_04_0402 + 22618998-22619043,22619206-22619345,22620067-226201... 41 7e-04
02_05_0161 + 26384079-26384086,26386173-26386226,26386376-263864... 40 0.001
01_01_0565 - 4159946-4160042,4160140-4160243,4160378-4160533,416... 40 0.001
07_03_0473 - 18525712-18525858,18526049-18526162,18526442-185265... 40 0.001
03_01_0326 + 2535800-2535938,2536891-2536959,2537310-2537375,253... 39 0.002
01_05_0340 - 21139885-21139978,21140169-21140272,21140379-211405... 39 0.003
04_04_0191 + 23468410-23468455,23468560-23468699,23469119-234692... 38 0.005
10_08_0250 - 16179646-16179759,16180197-16180325,16180519-161806... 37 0.011
07_01_0926 - 7775536-7775616,7775695-7775787,7775903-7775965,777... 36 0.026
05_05_0118 - 22504483-22504566,22504650-22504742,22504852-225049... 35 0.034
03_06_0475 + 34193951-34194023,34195414-34195486,34195572-341956... 35 0.034
05_03_0286 - 11623575-11624063,11625098-11625262 33 0.14
09_06_0029 + 20336634-20336881,20337737-20338208 32 0.24
07_03_1397 + 26269186-26269525,26269727-26269932,26270225-262703... 32 0.24
06_03_1387 - 29820358-29821035 32 0.24
05_07_0205 - 28402436-28402505,28402604-28402681,28402789-284029... 31 0.42
01_06_1343 - 36461476-36461961,36463355-36463519 31 0.42
10_03_0038 - 7297210-7297248,7297361-7297429,7297524-7297731,729... 31 0.56
09_02_0464 - 9591139-9591571,9592601-9592818 30 1.3
09_02_0222 + 5968232-5968467,5970811-5971187,5972216-5972256,597... 30 1.3
05_07_0127 - 27872803-27873238,27873842-27874059 30 1.3
05_06_0082 - 25425050-25425479,25426551-25426783 30 1.3
05_01_0036 + 253734-253904,255216-255707 30 1.3
06_03_0414 - 20548577-20549006,20553521-20553744 29 1.7
08_02_1318 - 26111031-26111276,26112139-26112427,26112936-261130... 29 2.2
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859... 29 3.0
05_01_0037 - 256891-256998,257347-257502,257753-257824,258737-25... 29 3.0
01_01_0893 + 7043130-7043182,7043309-7043335,7043461-7043560,704... 29 3.0
01_06_0712 + 31397167-31397402,31399823-31400252 28 3.9
10_02_0136 + 5719136-5719780,5719923-5720237 28 5.2
03_05_0601 + 26039326-26039367,26039958-26040035,26040136-260403... 28 5.2
01_06_0186 + 27294973-27295211,27295610-27296045 28 5.2
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 118 bits (283), Expect = 4e-27
Identities = 59/158 (37%), Positives = 83/158 (52%), Gaps = 2/158 (1%)
Query: 23 GLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYF 81
GLD AGKTTIL + GE + TI PT+GFN++T+E+K +WDVGGQ +R W++YF
Sbjct: 147 GLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYF 205
Query: 82 ESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALSLQQIREA 141
++T R+ NK DLP A++ +I +
Sbjct: 206 QNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDK 265
Query: 142 LDLDSIKSHHWRIVRCSAVTGENLLEGIDWMLDDIASR 179
L L S++ HW I A TGE L EG+DW+ +IAS+
Sbjct: 266 LGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNIASK 303
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 118 bits (283), Expect = 4e-27
Identities = 59/158 (37%), Positives = 83/158 (52%), Gaps = 2/158 (1%)
Query: 23 GLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYF 81
GLD AGKTTIL + GE + TI PT+GFN++T+E+K +WDVGGQ +R W++YF
Sbjct: 24 GLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYF 82
Query: 82 ESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALSLQQIREA 141
++T R+ NK DLP A++ +I +
Sbjct: 83 QNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDK 142
Query: 142 LDLDSIKSHHWRIVRCSAVTGENLLEGIDWMLDDIASR 179
L L S++ HW I A TGE L EG+DW+ +IAS+
Sbjct: 143 LGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNIASK 180
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 116 bits (280), Expect = 9e-27
Identities = 58/158 (36%), Positives = 83/158 (52%), Gaps = 2/158 (1%)
Query: 23 GLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYF 81
GLD AGKTTIL + GE + TI PT+GFN++T+E+K +WDVGGQ +R W++YF
Sbjct: 24 GLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYF 82
Query: 82 ESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALSLQQIREA 141
++T R+ NK DLP A++ +I +
Sbjct: 83 QNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDK 142
Query: 142 LDLDSIKSHHWRIVRCSAVTGENLLEGIDWMLDDIASR 179
L L S++ HW I A TGE L EG+DW+ +IA++
Sbjct: 143 LGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNIANK 180
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 115 bits (277), Expect = 2e-26
Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 2/158 (1%)
Query: 23 GLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYF 81
GLD AGKTTIL + GE + TI PT+GFN++T+E+K +WDVGGQ +R W++YF
Sbjct: 24 GLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYF 82
Query: 82 ESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALSLQQIREA 141
++T R+ NK DLP A++ +I +
Sbjct: 83 QNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDK 142
Query: 142 LDLDSIKSHHWRIVRCSAVTGENLLEGIDWMLDDIASR 179
L L S++ HW I A +GE L EG+DW+ ++IA++
Sbjct: 143 LGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 180
>02_02_0711 -
13180406-13180423,13180483-13180563,13181026-13181188,
13182096-13182206,13182365-13182429
Length = 145
Score = 108 bits (260), Expect = 2e-24
Identities = 51/116 (43%), Positives = 64/116 (55%)
Query: 23 GLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 82
GLDN+GKTTI+ + NGE ISPTLGFNIKT+++ + LNIWD+GGQK++RSYW+NYFE
Sbjct: 23 GLDNSGKTTIVLKINGEDTGVISPTLGFNIKTIKYHKYSLNIWDIGGQKTIRSYWRNYFE 82
Query: 83 STXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALSLQQI 138
T RL C NK D+ GAL +I
Sbjct: 83 QTDGLVWVVDSSDIRRLDDCRAELHNLLKEERLAGASLLVFANKQDIQGALKPSEI 138
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 108 bits (259), Expect = 3e-24
Identities = 58/164 (35%), Positives = 84/164 (51%), Gaps = 8/164 (4%)
Query: 23 GLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYF 81
GLD AGKTTIL + GE + TI PT+GFN++T+E+K +WDVGGQ +R W++YF
Sbjct: 24 GLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYF 82
Query: 82 ESTXXXXXXXXXXXXXRLSACXXXXXXXX------XXXXXXXXXXXXXXNKCDLPGALSL 135
++T R+ NK DLP A++
Sbjct: 83 QNTQGLIFVVDSNDRERVVEARDELHRMLNELQNWKKDELRDAVLLVFANKQDLPNAMNA 142
Query: 136 QQIREALDLDSIKSHHWRIVRCSAVTGENLLEGIDWMLDDIASR 179
+I + L L S++ HW I A +GE L EG+DW+ ++IAS+
Sbjct: 143 AEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 186
>08_01_0921 +
9075409-9075511,9075606-9075689,9075744-9075806,
9077163-9077181,9078227-9078338,9078902-9078949,
9079372-9079502,9079673-9079757,9079776-9079784
Length = 217
Score = 107 bits (256), Expect = 7e-24
Identities = 63/167 (37%), Positives = 81/167 (48%), Gaps = 15/167 (8%)
Query: 19 IKVRGLDNAGKTTILKRFN-GEPIDTI-----SP---------TLGFNIKTLEHKGFKLN 63
I V GLDNAGKTTIL R GE + TI +P +GFN++T+++ K
Sbjct: 20 ILVLGLDNAGKTTILYRLQMGEVVSTIPSGFPAPDSLIFFLPFAIGFNVETVQYNNIKFQ 79
Query: 64 IWDVGGQKSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXX 123
+WD+GGQ S+R YW+ YF +T RL
Sbjct: 80 VWDLGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVTAKEEFHAILEEDELKGAVVLVY 139
Query: 124 XNKCDLPGALSLQQIREALDLDSIKSHHWRIVRCSAVTGENLLEGID 170
NK DLPGAL I E+L+L IKS W I + SA+ GE L EG+D
Sbjct: 140 ANKQDLPGALDDAAITESLELHKIKSRQWAIFKTSAIKGEGLFEGLD 186
>07_01_0844 +
6855195-6855342,6855752-6855802,6856460-6856530,
6856736-6856855,6857043-6857161,6857377-6857458,
6857592-6857597
Length = 198
Score = 100 bits (240), Expect = 6e-22
Identities = 59/175 (33%), Positives = 83/175 (47%), Gaps = 19/175 (10%)
Query: 23 GLDNAGKTTILKRFN-GEPIDTISPTL-----------------GFNIKTLEHKGFKLNI 64
GLD AGKTTIL + GE + TI PT+ GFN++T+E+K +
Sbjct: 24 GLDAAGKTTILYKLKLGEIVTTI-PTIDIYLYVLSNLKAITEEKGFNVETVEYKNISFTV 82
Query: 65 WDVGGQKSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXX 124
WDVGGQ +R W++YF++T R+
Sbjct: 83 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFA 142
Query: 125 NKCDLPGALSLQQIREALDLDSIKSHHWRIVRCSAVTGENLLEGIDWMLDDIASR 179
NK DLP A++ +I + L L S++ HW I A TGE L EG+DW+ +IAS+
Sbjct: 143 NKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNIASK 197
>02_05_0413 +
28773869-28773925,28774045-28774135,28774515-28774630,
28775627-28775686,28775767-28775832,28776499-28776693
Length = 194
Score = 100 bits (240), Expect = 6e-22
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 2/151 (1%)
Query: 23 GLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYF 81
GLD AGKTTIL + + GE + T+ PT+GFN++ +++K +WDVGGQ+ LR W++YF
Sbjct: 24 GLDAAGKTTILYKLHIGEVLSTV-PTIGFNVEKVQYKNVMFTVWDVGGQEKLRPLWRHYF 82
Query: 82 ESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALSLQQIREA 141
+T R+ NK D+ GA++ ++ E
Sbjct: 83 NNTDGLIYVVDSLDRERIGKAKAEFQAIVNDPLMLNSVILVFANKQDMKGAMTPLEVCEG 142
Query: 142 LDLDSIKSHHWRIVRCSAVTGENLLEGIDWM 172
L L +K+ W I A+ G+ L EG+DW+
Sbjct: 143 LGLYDLKNRIWHIQGSCALKGDGLYEGLDWL 173
>10_08_1062 +
22626262-22626318,22626404-22626494,22626601-22626716,
22627035-22627094,22627204-22627269,22627726-22627914
Length = 192
Score = 99.1 bits (236), Expect = 2e-21
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Query: 23 GLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYF 81
GLD AGKTTIL + + GE + T+ PT+GFN++ +++K +WDVGGQ+ LR W++YF
Sbjct: 24 GLDAAGKTTILYKLHIGEVLSTV-PTIGFNVEKVQYKNVVFTVWDVGGQEKLRPLWRHYF 82
Query: 82 ESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALSLQQIREA 141
+T R+ NK D+ GA++ ++ E
Sbjct: 83 NNTDALIYVVDSLDRERIGRARAEFQAIINDPFMLNSVLLVFANKQDMRGAMTPMEVCEG 142
Query: 142 LDLDSIKSHHWRIVRCSAVTGENLLEGIDWM 172
L L + + W I A+ G+ L EG+DW+
Sbjct: 143 LGLYDLNNRIWHIQGTCALKGDGLYEGLDWL 173
>06_01_0098 +
818374-818427,818537-818627,818753-818868,818962-819087,
819175-819357
Length = 189
Score = 97.1 bits (231), Expect = 7e-21
Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 3/158 (1%)
Query: 17 ISIKVRGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRS 75
+ + + GLD AGKTTIL R + GE + +I PT+GFN++ +E+K +WDVGGQ LR
Sbjct: 17 MKVLMLGLDAAGKTTILYRLHIGEVLSSI-PTIGFNVEKVEYKNVAFTVWDVGGQDKLRP 75
Query: 76 YWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALSL 135
W+ YF + R+ NK DL GA+S
Sbjct: 76 LWRQYFRNADALIYVVDSMDRERIGVAKEEFQAIIRDPLMLNSVILLLANKQDLKGAMSS 135
Query: 136 QQIREALD-LDSIKSHHWRIVRCSAVTGENLLEGIDWM 172
++ + L + +K+ W SA+TG+ L G+DW+
Sbjct: 136 SEVCQRLGAYEELKNRRWHCQGASALTGDGLHGGLDWL 173
>03_03_0224 +
15580944-15581036,15581630-15581770,15582385-15582493,
15582598-15582659,15583704-15583807,15584058-15584160
Length = 203
Score = 80.6 bits (190), Expect = 7e-16
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 7/165 (4%)
Query: 19 IKVRGLDNAGKTTILKRFN-----GEPI--DTISPTLGFNIKTLEHKGFKLNIWDVGGQK 71
+ + G+D AGKTT+L++ GE + D I PT+G NI +E KL WD+GGQ
Sbjct: 20 VLILGVDKAGKTTLLEKIKSIYLKGEGLTPDRIVPTVGLNIGRIEDANAKLVFWDLGGQV 79
Query: 72 SLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPG 131
LR+ W+ Y++ NK DLPG
Sbjct: 80 GLRTIWEKYYQEAHAIIYVIDAAAASSFEDAKSALEKVLRHEDLKGAPLLIFANKQDLPG 139
Query: 132 ALSLQQIREALDLDSIKSHHWRIVRCSAVTGENLLEGIDWMLDDI 176
++ +++ L L + ++ SA G + GIDW+++ +
Sbjct: 140 VITDEELARYLQLKELDERPYKFQAVSAYDGRGIKSGIDWVVEQM 184
>11_06_0218 +
21361975-21362314,21362463-21362545,21363870-21363965,
21364451-21364813
Length = 293
Score = 76.6 bits (180), Expect = 1e-14
Identities = 37/119 (31%), Positives = 54/119 (45%)
Query: 64 IWDVGGQKSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXX 123
+WD+GGQ+SLR+ W Y+ T R++
Sbjct: 174 VWDLGGQESLRTSWATYYRGTHAVIVVIDSTDRARINIIKDELFRLLQHGDLEGAVVLVF 233
Query: 124 XNKCDLPGALSLQQIREALDLDSIKSHHWRIVRCSAVTGENLLEGIDWMLDDIASRIFT 182
NK DL A+S +I +AL L SIK+H W I A+TGE L +G+ W+ +A + T
Sbjct: 234 ANKQDLKDAMSPAEITDALSLHSIKNHDWHIQASCAITGEGLYDGLGWIAQKVAGKATT 292
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 MDGWIFFSMGTMVPVS-ISIKVRGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHK 58
M W+ M P I V GLDNAGKTT L + + GE + T +PT+G N++ + K
Sbjct: 1 MGAWMSRVWFLMFPAKEYKIVVVGLDNAGKTTTLYKLHLGEAV-TAAPTIGSNVEEVVFK 59
Query: 59 GFKLNI 64
+ +
Sbjct: 60 NIRFEV 65
>07_03_1298 -
25592788-25592890,25593126-25593229,25593747-25593808,
25593957-25594065,25594215-25594355,25594707-25594769,
25594974-25595084,25596140-25596457
Length = 336
Score = 76.6 bits (180), Expect = 1e-14
Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 7/165 (4%)
Query: 19 IKVRGLDNAGKTTILKRFN-------GEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQK 71
+ + G+ AGKTT+L++ G P D I PT+G NI +E KL WD+GGQ
Sbjct: 153 VVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNIGRIEDANVKLVFWDLGGQP 212
Query: 72 SLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPG 131
LR+ W+ Y+E NK +LP
Sbjct: 213 GLRTIWEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLHHEDLQGVPLLIFANKQELPA 272
Query: 132 ALSLQQIREALDLDSIKSHHWRIVRCSAVTGENLLEGIDWMLDDI 176
A++ +++ L L + + SA G + GIDW+++++
Sbjct: 273 AVTEEELARHLHLKGLDERPYMFQAGSAYDGTGIKAGIDWLVEEM 317
>02_01_0226 +
1476529-1476585,1477207-1477297,1478247-1478362,
1478834-1478893,1479000-1479065,1479847-1480047
Length = 196
Score = 68.9 bits (161), Expect = 2e-12
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 23 GLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYF 81
GLD AGKTTIL R + GE + T+ PT+GFN++ +++K +WDVGGQ+ LR WK Y
Sbjct: 24 GLDAAGKTTILYRLHMGEVLSTV-PTVGFNVEKVQYKNVVFTVWDVGGQEKLRPLWKMYL 82
Query: 82 EST 84
++
Sbjct: 83 SNS 85
>03_02_0046 -
5255513-5255630,5255715-5255876,5256579-5256733,
5256811-5256892,5257790-5257827
Length = 184
Score = 60.9 bits (141), Expect = 6e-10
Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 1/158 (0%)
Query: 17 ISIKVRGLDNAGKTTILKRF-NGEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRS 75
+ + + GL NAGKT+++ G + + PT+GFN++ + + +WD+GGQ RS
Sbjct: 20 MELSLIGLQNAGKTSLVNVIATGGFSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRS 79
Query: 76 YWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALSL 135
W+ Y + ++ NK D P A
Sbjct: 80 MWERYCRAVSAIVYVVDAADRENMAIAKSELHDLLSKPSLTGIPLLVIGNKIDKPEAFPK 139
Query: 136 QQIREALDLDSIKSHHWRIVRCSAVTGENLLEGIDWML 173
Q + + L +I S N+ IDW++
Sbjct: 140 QSFTDVMGLKTITDREVACFMISCKNSTNIDSVIDWLV 177
>12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202
Length = 193
Score = 51.2 bits (117), Expect = 5e-07
Identities = 33/132 (25%), Positives = 49/132 (37%)
Query: 23 GLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 82
GLDNAGKTT+L E + PT + L K +D+GG + R WK+Y+
Sbjct: 27 GLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYA 86
Query: 83 STXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALSLQQIREAL 142
R S NK D+P A S +++R +
Sbjct: 87 KVDAVVYLVDAYDKERFSESKKELDALLSDDSLATVPFLILGNKIDIPYAASEEELRYHM 146
Query: 143 DLDSIKSHHWRI 154
L + + R+
Sbjct: 147 GLSNFTTGKGRV 158
>01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024
Length = 193
Score = 50.0 bits (114), Expect = 1e-06
Identities = 32/124 (25%), Positives = 46/124 (37%)
Query: 23 GLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 82
GLDNAGKTT+L E + PT + L K +D+GG + R WK+Y+
Sbjct: 27 GLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYA 86
Query: 83 STXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALSLQQIREAL 142
R + NK D+P A S +++R L
Sbjct: 87 KVDAVVYLVDAYDKERFAESKKELDALLSDDSLAAVPFLILGNKIDIPYAASEEELRYHL 146
Query: 143 DLDS 146
L +
Sbjct: 147 GLSN 150
>02_05_0639 -
30552148-30552265,30552362-30552523,30553177-30553298,
30553515-30553596,30554407-30554699
Length = 258
Score = 48.8 bits (111), Expect = 3e-06
Identities = 33/157 (21%), Positives = 58/157 (36%), Gaps = 10/157 (6%)
Query: 17 ISIKVRGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSY 76
+ + + GL NAGKT+++ + +GFN++ + + +WD+GGQ+ R+
Sbjct: 105 MELSLVGLQNAGKTSLVN----------AVAVGFNMRKVTKGNVTIKLWDLGGQRRFRTM 154
Query: 77 WKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALSLQ 136
W+ Y + NK D A+S Q
Sbjct: 155 WERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLAGIPLLVLGNKIDKSEAVSKQ 214
Query: 137 QIREALDLDSIKSHHWRIVRCSAVTGENLLEGIDWML 173
+ + L L+ IK S N+ IDW++
Sbjct: 215 ALVDQLGLELIKDREVCCYMISCKDSVNIDVVIDWLI 251
>01_01_1068 -
8413269-8413589,8414011-8414262,8417472-8417603,
8417684-8417812
Length = 277
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 23 GLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYF 81
GLDNAGKTT+L E + PT + L K +D+GG + R WK+Y+
Sbjct: 27 GLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYY 85
>06_01_0853 +
6486027-6486158,6486561-6486692,6486974-6486978,
6487948-6488017,6489456-6489776
Length = 219
Score = 40.7 bits (91), Expect = 7e-04
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 23 GLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYF 81
GLDNAGKTT+ + E + PT + L + +D+GG + R W++Y+
Sbjct: 28 GLDNAGKTTLFYMLSQENLAVHQPTQHPTSEELSIGRIRFKAFDLGGHRIARRVWRDYY 86
>02_04_0402 +
22618998-22619043,22619206-22619345,22620067-22620149,
22620234-22620438,22620524-22620592,22621099-22621188
Length = 210
Score = 40.7 bits (91), Expect = 7e-04
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNG---EPID--TISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYW 77
G GK+ +L +F +P+ TI G + T+++K KL IWD GQ+S RS
Sbjct: 13 GDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSIT 72
Query: 78 KNYF 81
++Y+
Sbjct: 73 RSYY 76
>02_05_0161 +
26384079-26384086,26386173-26386226,26386376-26386448,
26386775-26386822,26386906-26386953,26387990-26388061,
26388156-26388311,26388428-26388531,26388628-26388724
Length = 219
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNGEP-IDTISPTLG--FNIKTLEHKG--FKLNIWDVGGQKSLRSYW 77
G GK+ +L RF + +D+ T+G F I+T+E G KL IWD GQ+ R+
Sbjct: 31 GDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTIT 90
Query: 78 KNYF 81
+Y+
Sbjct: 91 SSYY 94
>01_01_0565 -
4159946-4160042,4160140-4160243,4160378-4160533,
4160629-4160700,4161796-4161843,4161923-4161970,
4162295-4162367,4163188-4163201
Length = 203
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNGEP-IDTISPTLG--FNIKTLEHKG--FKLNIWDVGGQKSLRSYW 77
G GK+ +L RF + +D+ T+G F I+T+E G KL IWD GQ+ R+
Sbjct: 15 GDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTIT 74
Query: 78 KNYF 81
+Y+
Sbjct: 75 SSYY 78
>07_03_0473 -
18525712-18525858,18526049-18526162,18526442-18526522,
18526787-18526865,18526902-18526996,18527092-18527170,
18527339-18527450,18527682-18527770,18527868-18527938,
18528846-18528962
Length = 327
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 12 MVPVSISIKVR----GLDNAGKTTILKRFNGEPID-TISPTLGFNI--KT--LEHKGFKL 62
M PVS K + G + GKT+I+ RF + D T T+G + KT LE + +L
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 63 NIWDVGGQKSLRSYWKNYFEST 84
+WD GQ+ RS +Y +
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDS 82
>03_01_0326 +
2535800-2535938,2536891-2536959,2537310-2537375,
2537979-2538100,2538501-2538629,2540462-2540569
Length = 210
Score = 39.1 bits (87), Expect = 0.002
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 16 SISIKVRGLDNAGKTTILKRF-NGEPIDT-ISPTLG--FNIK--TLEHKGFKLNIWDVGG 69
S I + G GK+++L F + ID I+PT+G F IK T+ K KL IWD G
Sbjct: 12 SFKILLIGDSAVGKSSLLVSFVSASHIDDEIAPTIGVDFKIKFLTVNGKKLKLTIWDTAG 71
Query: 70 QKSLRSYWKNYF 81
Q+ R +Y+
Sbjct: 72 QERFRGITSSYY 83
>01_05_0340 -
21139885-21139978,21140169-21140272,21140379-21140534,
21140622-21140693,21140782-21140829,21140923-21140970,
21141807-21141879,21142333-21142346
Length = 202
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNGEP-IDTISPTLG--FNIKTLEHKG--FKLNIWDVGGQKSLRSYW 77
G GK+ +L RF + +++ T+G F I+T+E G KL IWD GQ+ R+
Sbjct: 15 GDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTIT 74
Query: 78 KNYF 81
+Y+
Sbjct: 75 SSYY 78
>04_04_0191 +
23468410-23468455,23468560-23468699,23469119-23469201,
23469346-23469550,23469632-23469735,23470290-23470449
Length = 245
Score = 37.9 bits (84), Expect = 0.005
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNG---EPID--TISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYW 77
G GK+ +L +F +P+ TI G + T++ + KL IWD GQ+S RS
Sbjct: 13 GDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITVDSRPVKLQIWDTAGQESFRSIT 72
Query: 78 KNYF 81
++Y+
Sbjct: 73 RSYY 76
>10_08_0250 -
16179646-16179759,16180197-16180325,16180519-16180640,
16181073-16181138,16182202-16182270,16182989-16183157
Length = 222
Score = 36.7 bits (81), Expect = 0.011
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 16 SISIKVRGLDNAGKTTILKRF-----NGEPIDTISPTLG--FNIK--TLEHKGFKLNIWD 66
S I + G GK+++L F D I+PT+G F IK T+ K KL IWD
Sbjct: 19 SFKILLIGDSGVGKSSLLVSFVVAAAAAHLDDDIAPTIGVDFKIKFLTIGGKKLKLTIWD 78
Query: 67 VGGQKSLRSYWKNYF 81
GQ+ R+ +Y+
Sbjct: 79 TAGQERFRTITSSYY 93
>07_01_0926 -
7775536-7775616,7775695-7775787,7775903-7775965,
7776326-7776423,7776661-7776761,7776865-7776937,
7778575-7778647
Length = 193
Score = 35.5 bits (78), Expect = 0.026
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 17 ISIKVRGLDNAGKTTILKRFN-GEPIDTISPTLG--FNIKTLEHKG--FKLNIWDVGGQK 71
I + + G GK+ +L RF+ G + T+G F I+T+E G KL IWD GQ+
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 75
Query: 72 SLRS 75
R+
Sbjct: 76 RFRT 79
>05_05_0118 -
22504483-22504566,22504650-22504742,22504852-22504914,
22505048-22505145,22505378-22505478,22505581-22505653,
22505872-22505910,22506946-22507018
Length = 207
Score = 35.1 bits (77), Expect = 0.034
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 9 MGTMVPVSISIKVRGLDNAGKTTILKRFN-GEPIDTISPTLG--FNIKTLEHKG--FKLN 63
+G V + + + + GK+ +L RF+ G + T+G F I+T+E G KL
Sbjct: 21 IGDSVFYKLFLVLSSIQCVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 80
Query: 64 IWDVGGQKSLRS 75
IWD GQ+ R+
Sbjct: 81 IWDTAGQERFRT 92
>03_06_0475 +
34193951-34194023,34195414-34195486,34195572-34195672,
34195912-34196009,34196326-34196388,34196534-34196626,
34196697-34196774
Length = 192
Score = 35.1 bits (77), Expect = 0.034
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 17 ISIKVRGLDNAGKTTILKRFN-GEPIDTISPTLG--FNIKTLEHKG--FKLNIWDVGGQK 71
I + + G GK+ +L RF+ G + T+G F I+T+E G KL IWD GQ+
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQE 75
Query: 72 SLRS 75
R+
Sbjct: 76 RFRT 79
>05_03_0286 - 11623575-11624063,11625098-11625262
Length = 217
Score = 33.1 bits (72), Expect = 0.14
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 23 GLDNAGKTTILKRF--NGEPIDTISPTLGFNIKT----LEHKGFKLNIWDVGGQKSLRSY 76
G GK+ IL RF N +D+ S T+G T +E K K IWD GQ+ R+
Sbjct: 19 GDSGVGKSNILSRFTRNHFSLDSKS-TIGVEFATKSLQMEGKTIKAQIWDTAGQERYRAI 77
Query: 77 WKNYF 81
Y+
Sbjct: 78 TSAYY 82
>09_06_0029 + 20336634-20336881,20337737-20338208
Length = 239
Score = 32.3 bits (70), Expect = 0.24
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Query: 19 IKVRGLDNAGKTTILKRFNGEP--IDTISPTLGFNIKT----LEHKGFKLNIWDVGGQKS 72
+ V G GKT +L RF + +D+ S T+G +T L K K IWD GQ+
Sbjct: 25 VVVVGDSAVGKTQLLGRFTKDEFFLDSKS-TIGVEFQTRTLSLHRKRVKAQIWDTAGQER 83
Query: 73 LRSYWKNYF 81
R+ Y+
Sbjct: 84 YRAVTSAYY 92
>07_03_1397 +
26269186-26269525,26269727-26269932,26270225-26270327,
26270570-26270577
Length = 218
Score = 32.3 bits (70), Expect = 0.24
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 19 IKVRGLDNAGKTTILKRF-NGEPIDTISPTLGFNIKT----LEHKGFKLNIWDVGGQKSL 73
I + G + GK+ +L RF E T+G +T ++ K K IWD GQ+
Sbjct: 17 IVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTAGQERF 76
Query: 74 RSYWKNYF 81
R+ Y+
Sbjct: 77 RAVTSAYY 84
>06_03_1387 - 29820358-29821035
Length = 225
Score = 32.3 bits (70), Expect = 0.24
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 19 IKVRGLDNAGKTTILKRFNGEP--IDTISPTLG--FNIKTLEHKG--FKLNIWDVGGQKS 72
+ V G GKT +L RF + ID+ S T+G F +T+E G K IWD GQ+
Sbjct: 10 VVVIGDSAVGKTQLLGRFTKDEFFIDSKS-TIGIEFQTRTVEIGGKRVKAQIWDTAGQER 68
Query: 73 LRSYWKNYF 81
R+ Y+
Sbjct: 69 YRAVTSAYY 77
>05_07_0205 -
28402436-28402505,28402604-28402681,28402789-28402968,
28403051-28403140,28403258-28403375,28403461-28403517,
28404155-28404224,28404317-28404319
Length = 221
Score = 31.5 bits (68), Expect = 0.42
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 8 SMGTMVPVSISIKVRGLDNAGKTTILKR-FNGEPIDTISPTLGFNIKTLEHK----GFKL 62
+ GT+ S + + G GKTT +KR GE PT+G + L+ +
Sbjct: 5 NQGTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCGKIRF 64
Query: 63 NIWDVGGQKSLRSYWKNYF 81
WD GQ+ Y+
Sbjct: 65 YCWDTAGQEKFGGLRDGYY 83
>01_06_1343 - 36461476-36461961,36463355-36463519
Length = 216
Score = 31.5 bits (68), Expect = 0.42
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNGEPIDTISP-TLGFNIKT----LEHKGFKLNIWDVGGQKSLRSYW 77
G GK+ IL RF S T+G T +E K K IWD GQ+ R+
Sbjct: 19 GDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTIKAQIWDTAGQERYRAIT 78
Query: 78 KNYF 81
Y+
Sbjct: 79 SAYY 82
>10_03_0038 -
7297210-7297248,7297361-7297429,7297524-7297731,
7297829-7297911,7298859-7298998,7299132-7299183
Length = 196
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 34 KRFNGEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYF 81
KRF T G + ++ K KL IWD GQ++ R ++Y+
Sbjct: 31 KRFREVEDLTTGVEYGACVVAVDGKNTKLQIWDTAGQEAFRCITRSYY 78
>09_02_0464 - 9591139-9591571,9592601-9592818
Length = 216
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNGEPIDTISP-TLGFNIKT----LEHKGFKLNIWDVGGQKSLRSYW 77
G GK+ +L RF S T+G T ++ K K IWD GQ+ R+
Sbjct: 19 GDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAIT 78
Query: 78 KNYF 81
Y+
Sbjct: 79 SAYY 82
>09_02_0222 +
5968232-5968467,5970811-5971187,5972216-5972256,
5972808-5972843
Length = 229
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 3 GWIFFSMGTMVPVSISIKVRGLDNAGKTTILKRFNGEPIDTISP-TLGFNIKT----LEH 57
G + +G + + + G GK+ +L RF + S T+G +T ++
Sbjct: 5 GGSYGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDA 64
Query: 58 KGFKLNIWDVGGQKSLRSYWKNYF 81
+ K IWD GQ+ R+ Y+
Sbjct: 65 RTVKAQIWDTAGQERYRAVTSAYY 88
>05_07_0127 - 27872803-27873238,27873842-27874059
Length = 217
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNGEPIDTISP-TLGFNIKT----LEHKGFKLNIWDVGGQKSLRSYW 77
G GK+ +L RF S T+G T ++ K K IWD GQ+ R+
Sbjct: 19 GDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYRAIT 78
Query: 78 KNYF 81
Y+
Sbjct: 79 SAYY 82
>05_06_0082 - 25425050-25425479,25426551-25426783
Length = 220
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNGEPIDTISP-TLGFNIKT----LEHKGFKLNIWDVGGQKSLRSYW 77
G GK+ +L RF S T+G T ++ K K IWD GQ+ R+
Sbjct: 24 GDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDTAGQERYRAIT 83
Query: 78 KNYF 81
Y+
Sbjct: 84 SAYY 87
>05_01_0036 + 253734-253904,255216-255707
Length = 220
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNGEPIDTISP-TLG--FNIKTLEHKG--FKLNIWDVGGQKSLRSYW 77
G GK+ +L RF S T+G F +TL +G K IWD GQ+ R+
Sbjct: 21 GDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTAGQERYRAIT 80
Query: 78 KNYF 81
Y+
Sbjct: 81 SAYY 84
>06_03_0414 - 20548577-20549006,20553521-20553744
Length = 217
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNGEPIDTISP-TLGFNIKT----LEHKGFKLNIWDVGGQKSLRSYW 77
G GK+ +L RF S T+G T ++ K K IWD GQ+ R+
Sbjct: 21 GDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRAIT 80
Query: 78 KNYF 81
Y+
Sbjct: 81 SAYY 84
>08_02_1318 -
26111031-26111276,26112139-26112427,26112936-26113036,
26113628-26113878,26114842-26114865,26115793-26116129
Length = 415
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 19 IKVRGLDNAGKTTILKRFNGEPIDTISP-TLGFNIKT----LEHKGFKLNIWDVGGQKSL 73
+ + G GK+ +L R+ + S T+G +T + K K IWD GQ+
Sbjct: 16 VVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIWDTAGQERF 75
Query: 74 RSYWKNYF 81
R+ Y+
Sbjct: 76 RAVTSAYY 83
>11_06_0561 -
24984960-24985205,24985283-24985354,24985906-24985977,
24986612-24986782,24987464-24987653,24987733-24987976,
24988162-24988474,24988687-24989517,24989628-24989672,
24989677-24989790,24989877-24990371,24990627-24990824,
24990902-24991357
Length = 1148
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 132 ALSLQQIREALDLDSIKSHHWRIVRCSAVTGENL----LEGIDWMLDDIASRIFTLD 184
++ L Q+ + DL+ H RI+ C+ V L L+ ID +L D A++I +D
Sbjct: 629 SIELPQLDDRKDLEEFCIRHSRIIICTPVCSSQLRELKLDTIDILLVDDAAQIKEID 685
>05_01_0037 -
256891-256998,257347-257502,257753-257824,
258737-258784,259071-259143,259237-259250
Length = 156
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 55 LEHKGFKLNIWDVGGQKSLRSYWKNYF 81
L+ K KL IWD GQ+ R+ +Y+
Sbjct: 36 LDGKTVKLQIWDTAGQERFRTITSSYY 62
>01_01_0893 +
7043130-7043182,7043309-7043335,7043461-7043560,
7045110-7045256,7045342-7045422,7045509-7045654,
7046030-7046099
Length = 207
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 17 ISIKVRGLDNAGKTTILKRF-NGEPIDTISPTLGFNIKT----LEHKGFKLNIWDVGGQK 71
+ + + G GKT+++ ++ N + + T+G + T ++ + F L IWD GQ+
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQE 68
Query: 72 SLRS 75
+S
Sbjct: 69 RFQS 72
>01_06_0712 + 31397167-31397402,31399823-31400252
Length = 221
Score = 28.3 bits (60), Expect = 3.9
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNGEPIDTISP-TLGFNIKT----LEHKGFKLNIWDVGGQKSLRSYW 77
G GK+ +L RF S T+G T ++ K K IWD GQ+ R+
Sbjct: 25 GDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVKAQIWDTAGQERYRAIT 84
Query: 78 KNYF 81
Y+
Sbjct: 85 SAYY 88
>10_02_0136 + 5719136-5719780,5719923-5720237
Length = 319
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 26 NAGKTTILKRFNGEPIDTISPTLGFNIKTLEHKGFKLNIW 65
N GK +L +G+ D I+P + L + F LN+W
Sbjct: 212 NWGKIDVLPEMHGDGGDQIAPAEDGGLLFLAVRDFSLNLW 251
>03_05_0601 +
26039326-26039367,26039958-26040035,26040136-26040303,
26040994-26041042,26041502-26041575,26041940-26041948
Length = 139
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 27 AGKTTILKRF-NGEPIDTISPTLG--FNIKTL--EHKGFKLNIWDVGGQKSLRSYWKNYF 81
AGK++++ RF G+ ++ T+G F +TL + K IWD GQ+ S Y+
Sbjct: 22 AGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPMYY 81
>01_06_0186 + 27294973-27295211,27295610-27296045
Length = 224
Score = 27.9 bits (59), Expect = 5.2
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 23 GLDNAGKTTILKRFNGEP--IDTISPTLG--FNIKTL--EHKGFKLNIWDVGGQKSLRSY 76
G GK+ +L RF + ++T S T+G F KT+ + + K IWD GQ+ R+
Sbjct: 26 GDSGVGKSNLLSRFARDEFSLETRS-TIGVEFATKTVRVDDRLVKAQIWDTAGQERYRAI 84
Query: 77 WKNYF 81
Y+
Sbjct: 85 TSAYY 89
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.322 0.138 0.434
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,195,413
Number of Sequences: 37544
Number of extensions: 130400
Number of successful extensions: 384
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 333
Number of HSP's gapped (non-prelim): 57
length of query: 184
length of database: 14,793,348
effective HSP length: 78
effective length of query: 106
effective length of database: 11,864,916
effective search space: 1257681096
effective search space used: 1257681096
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)
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