Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000786-TA|BGIBMGA000786-PA|IPR005225|Small GTP-binding
protein domain, IPR006689|ARF/SAR superfamily,
IPR006688|ADP-ribosylation factor, IPR006687|GTP-binding protein SAR1,
IPR003579|Ras small GTPase, Rab type
(184 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 183 6e-47
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 116 1e-26
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 109 2e-24
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 107 5e-24
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 107 5e-24
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 105 1e-23
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 103 8e-23
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 100 1e-21
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 95 4e-20
Z99281-9|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 75 3e-14
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 75 3e-14
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 74 5e-14
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 66 1e-11
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 64 6e-11
U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical pr... 58 3e-09
AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical ... 54 6e-08
AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical ... 54 6e-08
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 47 7e-06
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 44 9e-05
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 44 9e-05
Z83117-3|CAB05570.2| 356|Caenorhabditis elegans Hypothetical pr... 41 5e-04
AY008137-1|AAG32090.1| 356|Caenorhabditis elegans heterotrimeri... 41 5e-04
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 40 0.001
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 38 0.003
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 38 0.003
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 38 0.003
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 38 0.003
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 38 0.006
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 38 0.006
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 37 0.008
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 37 0.010
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 36 0.017
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 36 0.017
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 36 0.017
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 36 0.023
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 35 0.040
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 33 0.16
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 33 0.16
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 33 0.16
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 33 0.16
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 32 0.21
U97196-5|AAB52458.3| 368|Caenorhabditis elegans G protein, alph... 31 0.37
U97196-4|AAP68962.2| 408|Caenorhabditis elegans G protein, alph... 31 0.37
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 31 0.37
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 31 0.37
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 31 0.37
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 31 0.37
AY008136-1|AAG32089.1| 368|Caenorhabditis elegans heterotrimeri... 31 0.37
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 31 0.37
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 31 0.37
U40953-5|AAB52648.1| 385|Caenorhabditis elegans G protein, alph... 31 0.49
AY008128-1|AAG32081.1| 385|Caenorhabditis elegans heterotrimeri... 31 0.49
Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical pr... 31 0.65
Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical pr... 31 0.65
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 31 0.65
M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha... 31 0.65
AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeri... 31 0.65
AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeri... 31 0.65
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 30 0.86
Z70686-7|CAA94612.1| 352|Caenorhabditis elegans Hypothetical pr... 30 0.86
AY008130-1|AAG32083.1| 352|Caenorhabditis elegans heterotrimeri... 30 0.86
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 30 1.1
X53156-1|CAA37312.1| 356|Caenorhabditis elegans G-protein a-2 p... 30 1.1
U41996-6|AAA83475.1| 356|Caenorhabditis elegans G protein, alph... 30 1.1
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 30 1.1
AY008125-1|AAG32078.1| 356|Caenorhabditis elegans heterotrimeri... 30 1.1
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 29 1.5
Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical pr... 29 2.6
U55367-2|AAA97988.2| 356|Caenorhabditis elegans G protein, alph... 29 2.6
AY008132-1|AAG32085.1| 356|Caenorhabditis elegans heterotrimeri... 29 2.6
AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeri... 29 2.6
AF039041-6|ABM01867.1| 335|Caenorhabditis elegans G protein, al... 29 2.6
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 28 3.5
AY008127-1|AAG32080.1| 359|Caenorhabditis elegans heterotrimeri... 28 3.5
AF036706-13|AAK39279.2| 359|Caenorhabditis elegans G protein, a... 28 3.5
Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical pr... 28 4.6
U41995-5|AAA83462.1| 354|Caenorhabditis elegans G protein, alph... 28 4.6
M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alp... 28 4.6
AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeri... 28 4.6
AY008126-1|AAG32079.1| 354|Caenorhabditis elegans heterotrimeri... 28 4.6
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 27 8.0
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 183 bits (446), Expect = 6e-47
Identities = 83/166 (50%), Positives = 104/166 (62%)
Query: 19 IKVRGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWK 78
I + GLDNAGKTT++K+F EP DTI PTLGF+IKT+ K F+LN+WDVGGQKSLRSYWK
Sbjct: 19 ILILGLDNAGKTTLMKKFLDEPTDTIEPTLGFDIKTVHFKDFQLNLWDVGGQKSLRSYWK 78
Query: 79 NYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALSLQQI 138
NYFEST RL C NK DLPGA+ + I
Sbjct: 79 NYFESTDALIWVVDSSDRERLLQCSEELKKLLGEERLAGASLLVLANKSDLPGAIDVNSI 138
Query: 139 REALDLDSIKSHHWRIVRCSAVTGENLLEGIDWMLDDIASRIFTLD 184
+ LDL SIKSHHW+I C A++G+ L++ + W+ DD+ SR+F LD
Sbjct: 139 AQVLDLHSIKSHHWKIFSCCALSGDRLVQAMTWLCDDVGSRLFILD 184
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 116 bits (279), Expect = 1e-26
Identities = 57/161 (35%), Positives = 83/161 (51%), Gaps = 1/161 (0%)
Query: 17 ISIKVRGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHKG-FKLNIWDVGGQKSLRS 75
I I + GLDNAGKTTILK+ + E + ++PT GFN+KT+ G +LN+WD+GGQ+S+R
Sbjct: 18 IRILLLGLDNAGKTTILKQLSSEDVQHVTPTKGFNVKTVAAMGDIRLNVWDIGGQRSIRP 77
Query: 76 YWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALSL 135
YW NY+E+ R NK DL A S
Sbjct: 78 YWSNYYENIDTLIFVIDSNDKKRFDEMNIELGELLDEEKLRKVPVLIFANKQDLVTAASS 137
Query: 136 QQIREALDLDSIKSHHWRIVRCSAVTGENLLEGIDWMLDDI 176
++I L+LD ++ W I CSA+ E + +GI W+ ++
Sbjct: 138 EEITRKLNLDLLRDRTWHIQACSALKNEGINDGITWVASNL 178
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 109 bits (261), Expect = 2e-24
Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
Query: 23 GLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYF 81
GLD AGKTTIL + GE + TI PT+GFN++T+E+K +WDVGGQ +R W++YF
Sbjct: 24 GLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYF 82
Query: 82 ESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALSLQQIREA 141
++T R+ NK DLP A++ ++ +
Sbjct: 83 QNTQGLIFVVDSNDRERVGEAREELMRMLAEDELRDAVLLVFANKQDLPQAMNAAEVTDK 142
Query: 142 LDLDSIKSHHWRIVRCSAVTGENLLEGIDWMLDDIASR 179
L L S+++ W I A +G+ L EG+DW+ + + +R
Sbjct: 143 LGLHSLRNRSWYIQATCATSGDGLYEGLDWLSNQLKNR 180
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 107 bits (257), Expect = 5e-24
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Query: 17 ISIKVRGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRS 75
+ I + GLD AGKTTIL + GE + TI PT+GFN++T+E+K +WDVGGQ +R
Sbjct: 18 VRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKNISFTVWDVGGQDKIRP 76
Query: 76 YWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALSL 135
W++YF++T R+ NK DLP A++
Sbjct: 77 LWRHYFQNTQGLIFVVDSNDKERIEESREELHKMLNEDELRDATLLVFANKQDLPNAMTA 136
Query: 136 QQIREALDLDSIKSHHWRIVRCSAVTGENLLEGIDWMLDDIA 177
++ + L L +++S W I A G L EG+DW+ + ++
Sbjct: 137 AELTDKLGLHNLRSRQWYIQATCATQGHGLYEGLDWLSNQLS 178
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 107 bits (257), Expect = 5e-24
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Query: 17 ISIKVRGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRS 75
+ I + GLD AGKTTIL + GE + TI PT+GFN++T+E+K +WDVGGQ +R
Sbjct: 18 VRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKNISFTVWDVGGQDKIRP 76
Query: 76 YWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALSL 135
W++YF++T R+ NK DLP A++
Sbjct: 77 LWRHYFQNTQGLIFVVDSNDKERIEESREELHKMLNEDELRDATLLVFANKQDLPNAMTA 136
Query: 136 QQIREALDLDSIKSHHWRIVRCSAVTGENLLEGIDWMLDDIA 177
++ + L L +++S W I A G L EG+DW+ + ++
Sbjct: 137 AELTDKLGLHNLRSRQWYIQATCATQGHGLYEGLDWLSNQLS 178
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 105 bits (253), Expect = 1e-23
Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 2/180 (1%)
Query: 1 MDGWIFFSMGTMVPVSISIKVRGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHKG 59
M G + + G + I + GLD AGKTTIL R GE + TI PT+GFN++ +E+K
Sbjct: 1 MGGVMSYFRGLFGAREMRILILGLDGAGKTTILYRLQVGEVVTTI-PTIGFNVEQVEYKN 59
Query: 60 FKLNIWDVGGQKSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXX 119
K +WD+GGQ S+R YW+ Y+ +T R+
Sbjct: 60 LKFQVWDLGGQTSIRPYWRCYYANTDAIIYVVDSADRDRVGISRQELATMLQEDELQGAV 119
Query: 120 XXXXXNKCDLPGALSLQQIREALDLDSIKSHHWRIVRCSAVTGENLLEGIDWMLDDIASR 179
NK D+ G L+ ++ +AL LD++++ +I + SA GE L +DW+ + + +
Sbjct: 120 LAVLANKQDIAGCLTETEVYKALGLDALRNRTIQIFKTSASKGEGLDPAMDWLANQLQQK 179
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 103 bits (247), Expect = 8e-23
Identities = 53/151 (35%), Positives = 77/151 (50%), Gaps = 2/151 (1%)
Query: 23 GLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYF 81
GLD AGKTTIL + E ++TI PT+GFN++T+ + L +WDVGGQK +R+ WK YF
Sbjct: 24 GLDGAGKTTILYKLKLNETVNTI-PTIGFNVETVTFQKITLTVWDVGGQKKIRALWKYYF 82
Query: 82 ESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALSLQQIREA 141
+T R+ NK D+P A S ++ +
Sbjct: 83 PNTTTLVFVVDSSDIERIPEAKEELFSLLAEPELADSHLLVFANKQDMPNARSPAELTQL 142
Query: 142 LDLDSIKSHHWRIVRCSAVTGENLLEGIDWM 172
LDL S+K+ W I +A +G+ L EG+ W+
Sbjct: 143 LDLGSLKNREWFICGTNAHSGQGLYEGLMWV 173
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 99.5 bits (237), Expect = 1e-21
Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 2/157 (1%)
Query: 17 ISIKVRGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRS 75
+ I + GLD AGKTTIL + G+ + TI PT+GFN++T+ +K K N+WDVGGQ +R
Sbjct: 14 LRILMLGLDAAGKTTILYKLKLGQSVTTI-PTVGFNVETVTYKNIKFNVWDVGGQDKIRP 72
Query: 76 YWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALSL 135
W++Y+ T R+ NK DL A+
Sbjct: 73 LWRHYYTGTQALIFVMDAADRDRVDEARMELHRIINDREMKEAIILVFANKQDLADAMKP 132
Query: 136 QQIREALDLDSIKSHHWRIVRCSAVTGENLLEGIDWM 172
+I++ L L I+ +W + A TG+ L EG+ W+
Sbjct: 133 HEIQDKLGLTRIRDRNWYVQPSCASTGDGLHEGLTWL 169
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 94.7 bits (225), Expect = 4e-20
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 1/159 (0%)
Query: 19 IKVRGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWK 78
I V GLDNAGKTTIL + + PT+G N++ + ++ IWD+GGQ+SLR W
Sbjct: 20 IIVVGLDNAGKTTILYNYVTKDQVETKPTIGSNVEEVSYRNLDFVIWDIGGQESLRKSWS 79
Query: 79 NYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALSLQQI 138
Y+ T R+ NK DLPGA++ ++
Sbjct: 80 TYYVQTDVVIVVIDSSDTTRIPIMKEQLHNMLQHEDLARAHILVLANKQDLPGAMNPAEV 139
Query: 139 REALDLDSIK-SHHWRIVRCSAVTGENLLEGIDWMLDDI 176
L L +++ + W+I C AV GE L E ++W+ +++
Sbjct: 140 STQLGLQTLRGARKWQINGCCAVKGEGLPEALEWIANNL 178
>Z99281-9|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 74.9 bits (176), Expect = 3e-14
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Query: 23 GLDNAGKTTILKRF-NGEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYF 81
GL N+GKTT + +G+ + + PT+GFN++ + + +WD+GGQ RS W+ Y
Sbjct: 27 GLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYC 86
Query: 82 ESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALSLQQIREA 141
+L A NK DLPGAL +Q+ E
Sbjct: 87 RGVNAIVFMVDAADEEKLEASRNELMQLLDKPQLDAIPVLVLGNKKDLPGALDERQLIER 146
Query: 142 LDLDSIKSHHWRIVRCSAVTGENLLEGIDWMLD 174
++L SI++ S EN+ + W++D
Sbjct: 147 MNLSSIQNREICCYSISCKEKENIDITLQWLID 179
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 74.9 bits (176), Expect = 3e-14
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Query: 23 GLDNAGKTTILKRF-NGEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYF 81
GL N+GKTT + +G+ + + PT+GFN++ + + +WD+GGQ RS W+ Y
Sbjct: 27 GLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYC 86
Query: 82 ESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALSLQQIREA 141
+L A NK DLPGAL +Q+ E
Sbjct: 87 RGVNAIVFMVDAADEEKLEASRNELMQLLDKPQLDAIPVLVLGNKKDLPGALDERQLIER 146
Query: 142 LDLDSIKSHHWRIVRCSAVTGENLLEGIDWMLD 174
++L SI++ S EN+ + W++D
Sbjct: 147 MNLSSIQNREICCYSISCKEKENIDITLQWLID 179
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 74.1 bits (174), Expect = 5e-14
Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
Query: 23 GLDNAGKTTILKRFNGEPIDTIS---PTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKN 79
GLD AGKT+I++R +DT+ PT+GFNI+T+ +K ++LN WDVGG LR WK+
Sbjct: 376 GLDGAGKTSIVRRLKKVQMDTVMAPHPTIGFNIETIHYKNYRLNFWDVGGLPKLRHLWKH 435
Query: 80 YFES 83
Y+ +
Sbjct: 436 YYSN 439
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 66.1 bits (154), Expect = 1e-11
Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 4/153 (2%)
Query: 17 ISIKVRGLDNAGKTTILKRFNGEPIDT--ISPTLGFNIKTLEHKGFKLNIWDVGGQKSLR 74
++I V GLDN+GKTTIL + + I PT+G + + + +D+ GQ R
Sbjct: 18 VNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFHAFDMAGQMKYR 77
Query: 75 SYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXX--XXXXXNKCDLPGA 132
S W++YF S+ R+ NK D+PGA
Sbjct: 78 STWESYFHSSQGVIFVLDSSDRLRMELLKDELMMVMEHKDVVSRGIPIVILANKMDIPGA 137
Query: 133 LSLQQIREALDLDSIKSHHWRIVRCSAVTGENL 165
++ I AL L+ +S W I A+TG+ L
Sbjct: 138 MTASDITVALGLNLYRSGTWSIHSTCALTGDGL 170
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 64.1 bits (149), Expect = 6e-11
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 9/169 (5%)
Query: 19 IKVRGLDNAGKTTILKRFNGEPI--------DTISPTLGFNIKTLEHKGFKLNIWDVGGQ 70
+ + GLDNAGKTT L++ + I+ T+G N +E L+ WD+GGQ
Sbjct: 20 VVIVGLDNAGKTTFLEQTKSHFVKDYGVLNPSKITATVGLNTGNVELNNTCLHFWDLGGQ 79
Query: 71 KSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLP 130
+SLR W Y++ NK ++
Sbjct: 80 ESLRELWATYYDDANAMIFVVDATRSDLFPIVASQFKEVMANEIVQNIPVLVAVNKSEME 139
Query: 131 GALSLQQIREALDLDSIKSHHWRIVRCSAVTGENLLEGIDWMLDDIASR 179
GA + ++R L+ D+ +S ++ SA+ G N+ + W++ +AS+
Sbjct: 140 GAAAAAEVRMLLEDDNHRS-DLAVLPVSALEGTNIERCVHWIVRSLASQ 187
>U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical
protein ZK180.4 protein.
Length = 193
Score = 58.4 bits (135), Expect = 3e-09
Identities = 41/162 (25%), Positives = 60/162 (37%), Gaps = 12/162 (7%)
Query: 23 GLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 82
GLDNAGKTT+L + I PTL + + G +D+GG R WK+YF
Sbjct: 28 GLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQARRVWKDYFP 87
Query: 83 STXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALSLQQIREAL 142
+ R+ NK D PGALS Q++ L
Sbjct: 88 AVDAVVFLIDVADAERMQESRVELESLLQDEQIASVPVLILGNKIDKPGALSEDQLKWQL 147
Query: 143 DL------------DSIKSHHWRIVRCSAVTGENLLEGIDWM 172
++ + + S + CS + + EGI W+
Sbjct: 148 NIQHMCTGKGDVSRNEMASRPMEVFMCSVLQRQGYGEGIRWL 189
>AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical
protein Y37E3.5b protein.
Length = 367
Score = 54.0 bits (124), Expect = 6e-08
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 23 GLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEH-KGFKLNIWDVGGQKSLRSYWKNYF 81
G+ +AGKTT LK GE + T GF+ +E+ + F L I+DVGG K +R W NY+
Sbjct: 31 GIGSAGKTTFLKVLKGEDPRDLLRTNGFSTVKMEYDETFHLTIYDVGGDKGIRGIWSNYY 90
>AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical
protein Y37E3.5a protein.
Length = 370
Score = 54.0 bits (124), Expect = 6e-08
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 23 GLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEH-KGFKLNIWDVGGQKSLRSYWKNYF 81
G+ +AGKTT LK GE + T GF+ +E+ + F L I+DVGG K +R W NY+
Sbjct: 31 GIGSAGKTTFLKVLKGEDPRDLLRTNGFSTVKMEYDETFHLTIYDVGGDKGIRGIWSNYY 90
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 47.2 bits (107), Expect = 7e-06
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 5/61 (8%)
Query: 28 GKTTILKRF-NGEPIDTISPTLG--FNIKTL--EHKGFKLNIWDVGGQKSLRSYWKNYFE 82
GKT +++RF NG +D T+G F +KTL + K KL IWD GGQ+ R+ ++Y+
Sbjct: 22 GKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDTGGQERFRTITQSYYR 81
Query: 83 S 83
S
Sbjct: 82 S 82
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 28 GKTTILKRFNGEPIDTISP-TLG--FNIKTLE--HKGFKLNIWDVGGQKSLRSYWKNYF 81
GK+ +L RF G+P D+I P TLG F + LE K KL++WD GQ+ RS +Y+
Sbjct: 18 GKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVWDTCGQERFRSLVGSYY 76
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family
protein 10 protein.
Length = 201
Score = 43.6 bits (98), Expect = 9e-05
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNGEPIDT-ISPTLG--FNIKTLEHKG--FKLNIWDVGGQKSLRSYW 77
G GKT IL RF+ + +T T+G F IKT+E KG KL IWD GQ+ +
Sbjct: 16 GDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTIT 75
Query: 78 KNYF 81
+Y+
Sbjct: 76 TSYY 79
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 43.6 bits (98), Expect = 9e-05
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNGEPIDT-ISPTLG--FNIKTLEHKG--FKLNIWDVGGQKSLRSYW 77
G GKT IL RF+ + +T T+G F IKT+E KG KL IWD GQ+ +
Sbjct: 16 GDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTIT 75
Query: 78 KNYF 81
+Y+
Sbjct: 76 TSYY 79
>Z83117-3|CAB05570.2| 356|Caenorhabditis elegans Hypothetical
protein M04C7.1 protein.
Length = 356
Score = 41.1 bits (92), Expect = 5e-04
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 46 PTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFES 83
PT+G +T+E KG K I+DVGGQ+S R W + F++
Sbjct: 182 PTMGVVQQTIEIKGTKFRIYDVGGQRSERRKWIHLFDN 219
>AY008137-1|AAG32090.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 41.1 bits (92), Expect = 5e-04
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 46 PTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFES 83
PT+G +T+E KG K I+DVGGQ+S R W + F++
Sbjct: 182 PTMGVVQQTIEIKGTKFRIYDVGGQRSERRKWIHLFDN 219
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNG---EPID--TISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYW 77
G GK+ +L +F +P+ TI G + T++ K KL IWD GQ+S RS
Sbjct: 13 GDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWDTAGQESFRSIT 72
Query: 78 KNYF 81
++Y+
Sbjct: 73 RSYY 76
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 39.1 bits (87), Expect = 0.002
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 19 IKVRGLDNAGKTTILKRF--NGEPIDTISPTLG--FNIKTLE--HKGFKLNIWDVGGQKS 72
I V G N GK+ IL RF N +D IS TLG F +KT++ +L +WD G +
Sbjct: 9 IVVVGDHNCGKSCILLRFAENSFRMDHIS-TLGVDFKLKTIKLGRDKIRLELWDTAGMER 67
Query: 73 LRSYWKNYFES 83
R+ + +Y+ S
Sbjct: 68 YRTIYNSYYHS 78
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 23 GLDNAGKTTILKRFNGEPID-TISPTLGFNI--KT--LEHKGFKLNIWDVGGQKSLRSYW 77
G + GKT+I+ RF + D T T+G + KT LE + +L +WD GQ+ RS
Sbjct: 18 GEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLI 77
Query: 78 KNYFEST 84
+Y +
Sbjct: 78 PSYIRDS 84
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 21 VRGLDNAGKTTILKRFN-GEPIDTISPTLG--FNIKTLEHK-GF--KLNIWDVGGQKSLR 74
V G GK+++L+ F G+ + PT+G F + +E + G+ KL +WD GQ+ R
Sbjct: 22 VIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRPGYRVKLQLWDTAGQEKFR 81
Query: 75 SYWKNYFEST 84
S K+Y+ ++
Sbjct: 82 SITKSYYRNS 91
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like
protein.
Length = 123
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNGEPID-TISPTLG--FNIKTLEHKG--FKLNIWDVGGQKSLRSYW 77
G GKT +L RF+ + + + T+G F I+T+E G KL IWD GQ+ R+
Sbjct: 15 GDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTIT 74
Query: 78 KNYF 81
Y+
Sbjct: 75 TAYY 78
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNGEPID-TISPTLG--FNIKTLEHKG--FKLNIWDVGGQKSLRSYW 77
G GKT +L RF+ + + + T+G F I+T+E G KL IWD GQ+ R+
Sbjct: 15 GDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTIT 74
Query: 78 KNYF 81
Y+
Sbjct: 75 TAYY 78
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNGEPID-TISPTLG--FNIKTLEHKG--FKLNIWDVGGQKSLRSYW 77
G GKT +L RF+ + + + T+G F I+T+E G KL IWD GQ+ R+
Sbjct: 15 GDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTIT 74
Query: 78 KNYF 81
Y+
Sbjct: 75 TAYY 78
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 37.5 bits (83), Expect = 0.006
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 23 GLDNAGKTTILKRFNGEPIDTI-SPTLG--FNIKTLEHKGFK--LNIWDVGGQKSLRSYW 77
G GK+ +L RF E D I + TLG F K L+ +K L +WD GQ++ RS
Sbjct: 13 GDGGVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLRVWDTCGQENFRSII 72
Query: 78 KNYFES 83
+ Y+ +
Sbjct: 73 RAYYRN 78
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family
protein 6.2 protein.
Length = 205
Score = 37.5 bits (83), Expect = 0.006
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 23 GLDNAGKTTILKRFNGEPID-TISPTLGFNI--KT--LEHKGFKLNIWDVGGQKSLRSYW 77
G + GKT+++ RF + D T T+G + KT LE + +L +WD GQ+ RS
Sbjct: 17 GEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLI 76
Query: 78 KNYFEST 84
+Y +
Sbjct: 77 PSYIRDS 83
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 37.1 bits (82), Expect = 0.008
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 23 GLDNAGKTTILKRFNGEPI-DTISPTLG--FNIKTLEHKG--FKLNIWDVGGQKSLRSYW 77
G GK+++L RF + T+G F I+T++ G KL IWD GQ+ R+
Sbjct: 17 GDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAGQERFRTIT 76
Query: 78 KNYFEST 84
Y+ T
Sbjct: 77 STYYRGT 83
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 36.7 bits (81), Expect = 0.010
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNGEPI-DTISPTLG--FNIKTLEHKG--FKLNIWDVGGQKSLRSYW 77
G GK+ +L RF + ++ T+G F I+T+E G KL IWD GQ+ R+
Sbjct: 18 GDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTIT 77
Query: 78 KNYF 81
+Y+
Sbjct: 78 SSYY 81
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 35.9 bits (79), Expect = 0.017
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 23 GLDNAGKTTILKRFN-GEPIDTISPTLG--FNIKTLE--HKGFKLNIWDVGGQKSLRSYW 77
G GKT ++++F G S T+G F IKT++ + KL IWD GQ+ RS
Sbjct: 14 GNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIWDTAGQERFRSIT 73
Query: 78 KNYFES 83
++Y+ S
Sbjct: 74 QSYYRS 79
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 35.9 bits (79), Expect = 0.017
Identities = 29/123 (23%), Positives = 41/123 (33%), Gaps = 7/123 (5%)
Query: 17 ISIKVRGLDNAGKTTILKRF------NGEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQ 70
+ + + G GKT +L R+ N I T+ + T+ K KL IWD GQ
Sbjct: 3 LKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQ 62
Query: 71 KSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLP 130
+ RS +Y+ C NKCDLP
Sbjct: 63 ERFRSVTTSYYRDADALLLVYDIANRASFENC-RNWLSQIKEYGKEAVQVTLVGNKCDLP 121
Query: 131 GAL 133
A+
Sbjct: 122 RAV 124
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 35.9 bits (79), Expect = 0.017
Identities = 29/123 (23%), Positives = 41/123 (33%), Gaps = 7/123 (5%)
Query: 17 ISIKVRGLDNAGKTTILKRF------NGEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQ 70
+ + + G GKT +L R+ N I T+ + T+ K KL IWD GQ
Sbjct: 3 LKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQ 62
Query: 71 KSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLP 130
+ RS +Y+ C NKCDLP
Sbjct: 63 ERFRSVTTSYYRDADALLLVYDIANRASFENC-RNWLSQIKEYGKEAVQVTLVGNKCDLP 121
Query: 131 GAL 133
A+
Sbjct: 122 RAV 124
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 35.5 bits (78), Expect = 0.023
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 28 GKTTILKRF---NGEPIDTISPTLGFNIKTLE---HKGFKLNIWDVGGQKSLRSYWKNYF 81
GKT L RF +P+ + + F +KT++ ++ + +WD GQ+ RS K YF
Sbjct: 214 GKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLWDTAGQERFRSITKQYF 273
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 34.7 bits (76), Expect = 0.040
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Query: 9 MGTMVPVSISIKVRGLDNAGKTTILKRFNGEPIDTIS-PTLGFNIKT----LEHKGFKLN 63
MG I + G GK+ +L RF + S PT+G T +E K K+
Sbjct: 1 MGNEYYYLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQ 60
Query: 64 IWDVGGQKSLRSYWKNYF 81
IWD G + R +Y+
Sbjct: 61 IWDTAGMERFRCGASSYY 78
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 32.7 bits (71), Expect = 0.16
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 34 KRFNGEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYF 81
K+F + TI G I + + KL IWD GQ+ R+ ++Y+
Sbjct: 34 KKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYY 81
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 32.7 bits (71), Expect = 0.16
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 28 GKTTILKR-FNGEPIDTISPTLG--FNIKTLEHKG--FKLNIWDVGGQKSLRSYWKNYF 81
GK++ + R + + + TLG F++KT+ G L +WD GQ+ RS K+YF
Sbjct: 473 GKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQERFRSLCKSYF 531
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 32.7 bits (71), Expect = 0.16
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 16 SISIKVRGLDNAGKTTILKRFNGEPIDTI-SPTLG--FNIKTLEHKG--FKLNIWDVGGQ 70
++ I + G GK++++ RF + D + T+G F + ++ G KL IWD GQ
Sbjct: 11 TLKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQ 70
Query: 71 KSLRSYWKNYF 81
+ R+ +Y+
Sbjct: 71 ERFRTLTPSYY 81
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 32.7 bits (71), Expect = 0.16
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 16 SISIKVRGLDNAGKTTIL-----KRFNGEPIDTISPTLGFNIKTL-EHKGFKLNIWDVGG 69
++ + V G AGKT +L F +P+ TI I L + + +L +WD G
Sbjct: 6 TVKVVVVGESGAGKTALLTCFLDNTFETDPLTTIGIDFKHKIVQLNDGQSIRLQLWDTAG 65
Query: 70 QKSLRSYWKNYFES 83
Q+ R Y S
Sbjct: 66 QERFRQLAPAYIRS 79
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 32.3 bits (70), Expect = 0.21
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 17 ISIKVRGLDNAGKTTILKRFNGEPID-TISPTLGFNI----KTLEHK-GFKLNIWDVGGQ 70
I I V G +GKT+I +RF E D + TLG + TL H+ + +WD+GGQ
Sbjct: 36 IKIVVVGDGASGKTSICQRFAKESFDKSYHQTLGLDFFSRRITLPHEMQVLVQVWDIGGQ 95
>U97196-5|AAB52458.3| 368|Caenorhabditis elegans G protein, alpha
subunit protein14, isoform a protein.
Length = 368
Score = 31.5 bits (68), Expect = 0.37
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 47 TLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 82
T+ N E+ G L + DVGGQ+S R W + F+
Sbjct: 182 TMSINSIVFEYTGVSLLMIDVGGQRSERKKWLHLFD 217
>U97196-4|AAP68962.2| 408|Caenorhabditis elegans G protein, alpha
subunit protein14, isoform b protein.
Length = 408
Score = 31.5 bits (68), Expect = 0.37
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 47 TLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 82
T+ N E+ G L + DVGGQ+S R W + F+
Sbjct: 222 TMSINSIVFEYTGVSLLMIDVGGQRSERKKWLHLFD 257
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 31.5 bits (68), Expect = 0.37
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNGEPIDT-ISPTLG--FNIKTLEH--KGFKLNIWDVGGQKSLRSYW 77
G + GKT+ L R+ + + T+G F +KT+ K KL IWD GQ+ R+
Sbjct: 29 GNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTIT 88
Query: 78 KNYF 81
Y+
Sbjct: 89 TAYY 92
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 31.5 bits (68), Expect = 0.37
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNGEPIDT-ISPTLG--FNIKTLEH--KGFKLNIWDVGGQKSLRSYW 77
G + GKT+ L R+ + + T+G F +KT+ K KL IWD GQ+ R+
Sbjct: 29 GNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTIT 88
Query: 78 KNYF 81
Y+
Sbjct: 89 TAYY 92
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 31.5 bits (68), Expect = 0.37
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNGEPIDT-ISPTLG--FNIKTLEH--KGFKLNIWDVGGQKSLRSYW 77
G + GKT+ L R+ + + T+G F +KT+ K KL IWD GQ+ R+
Sbjct: 29 GNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTIT 88
Query: 78 KNYF 81
Y+
Sbjct: 89 TAYY 92
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 31.5 bits (68), Expect = 0.37
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNGEPIDT-ISPTLG--FNIKTLEH--KGFKLNIWDVGGQKSLRSYW 77
G + GKT+ L R+ + + T+G F +KT+ K KL IWD GQ+ R+
Sbjct: 43 GNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTIT 102
Query: 78 KNYF 81
Y+
Sbjct: 103 TAYY 106
>AY008136-1|AAG32089.1| 368|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 368
Score = 31.5 bits (68), Expect = 0.37
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 47 TLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 82
T+ N E+ G L + DVGGQ+S R W + F+
Sbjct: 182 TMSINSIVFEYTGVSLLMIDVGGQRSERKKWLHLFD 217
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 31.5 bits (68), Expect = 0.37
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNGEPIDTISP-TLGFNIKT----LEHKGFKLNIWDVGGQKSLRSYW 77
G GK+ +L RF + S T+G T +E K K IWD GQ+ R+
Sbjct: 18 GDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERYRAIT 77
Query: 78 KNYF 81
Y+
Sbjct: 78 SAYY 81
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 31.5 bits (68), Expect = 0.37
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNGEPIDT-ISPTLG--FNIKTLEH--KGFKLNIWDVGGQKSLRSYW 77
G + GKT+ L R+ + + T+G F +KT+ K KL IWD GQ+ R+
Sbjct: 29 GNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTIT 88
Query: 78 KNYF 81
Y+
Sbjct: 89 TAYY 92
>U40953-5|AAB52648.1| 385|Caenorhabditis elegans G protein, alpha
subunit protein 5 protein.
Length = 385
Score = 31.1 bits (67), Expect = 0.49
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 7 FSMGTMVPVSISIKVRGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHKGFKLNIWD 66
F+ MVP I LD + + + I TLG + + ++ + + D
Sbjct: 141 FAFHPMVPDHIHYFYPNLDRIASSNYVPTAE-DLIHMRQTTLGVHEISFDYTKHIIRLID 199
Query: 67 VGGQKSLRSYWKNYFE 82
VGGQK+ R W ++FE
Sbjct: 200 VGGQKTERRKWIHFFE 215
>AY008128-1|AAG32081.1| 385|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 385
Score = 31.1 bits (67), Expect = 0.49
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 7 FSMGTMVPVSISIKVRGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHKGFKLNIWD 66
F+ MVP I LD + + + I TLG + + ++ + + D
Sbjct: 141 FAFHPMVPDHIHYFYPNLDRIASSNYVPTAE-DLIHMRQTTLGVHEISFDYTKHIIRLID 199
Query: 67 VGGQKSLRSYWKNYFE 82
VGGQK+ R W ++FE
Sbjct: 200 VGGQKTERRKWIHFFE 215
>Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical
protein T19C4.6 protein.
Length = 357
Score = 30.7 bits (66), Expect = 0.65
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 41 IDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 82
+ T PT+G KG ++DVGGQ+S R W + F+
Sbjct: 176 LHTRVPTMGVIEVNFTIKGKFFRVFDVGGQRSQRKKWIHCFD 217
>Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical
protein F56H9.3 protein.
Length = 364
Score = 30.7 bits (66), Expect = 0.65
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 46 PTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 82
PT G + K F I+DVGGQ++ R W + F+
Sbjct: 191 PTSGVIQYKIMLKNFNFRIFDVGGQRAQRRKWLHVFD 227
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 30.7 bits (66), Expect = 0.65
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Query: 23 GLDNAGKTTILKRFNGEPIDTISP-TLGFNIKT----LEHKGFKLNIWDVGGQKSLRSYW 77
G GK+ +L RF S T+G T +E K K IWD GQ+ R+
Sbjct: 18 GDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERYRAIT 77
Query: 78 KNYF 81
Y+
Sbjct: 78 SAYY 81
>M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 357
Score = 30.7 bits (66), Expect = 0.65
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 41 IDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 82
+ T PT+G KG ++DVGGQ+S R W + F+
Sbjct: 176 LHTRVPTMGVIEVNFTIKGKFFRVFDVGGQRSQRKKWIHCFD 217
>AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 30.7 bits (66), Expect = 0.65
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 46 PTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 82
PT G + K F I+DVGGQ++ R W + F+
Sbjct: 191 PTSGVIQYKIMLKNFNFRIFDVGGQRAQRRKWLHVFD 227
>AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 357
Score = 30.7 bits (66), Expect = 0.65
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 41 IDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 82
+ T PT+G KG ++DVGGQ+S R W + F+
Sbjct: 176 LHTRVPTMGVIEVNFTIKGKFFRVFDVGGQRSQRKKWIHCFD 217
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 30.3 bits (65), Expect = 0.86
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Query: 8 SMGTMVPVSISIKVRGLDNAGKTTILKR-FNGEPIDTISPTLGFNIKTL---EHKG-FKL 62
S G +P + + + G GKTT +KR GE TLG + L ++G +
Sbjct: 2 SGGDGIP-TFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRF 60
Query: 63 NIWDVGGQKSLRSYWKNYF 81
N+WD GQ+ Y+
Sbjct: 61 NVWDTAGQEKFGGLRDGYY 79
>Z70686-7|CAA94612.1| 352|Caenorhabditis elegans Hypothetical
protein R10H10.5 protein.
Length = 352
Score = 30.3 bits (65), Expect = 0.86
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 47 TLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFES 83
T G E KG + DVGGQ+S R W + F++
Sbjct: 180 TTGITEVLFELKGLTFRVIDVGGQRSERKKWIHCFDN 216
>AY008130-1|AAG32083.1| 352|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 352
Score = 30.3 bits (65), Expect = 0.86
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 47 TLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFES 83
T G E KG + DVGGQ+S R W + F++
Sbjct: 180 TTGITEVLFELKGLTFRVIDVGGQRSERKKWIHCFDN 216
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 15 VSISIKVRGLDNAGKTTILKRFNGEPIDT-ISPTLG--FNIKTL---EHKGFKLNIWDVG 68
+S + V G GKT+I++RF + T+G F +K L E+ L IWD+
Sbjct: 10 ISYKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDIS 69
Query: 69 GQ 70
GQ
Sbjct: 70 GQ 71
>X53156-1|CAA37312.1| 356|Caenorhabditis elegans G-protein a-2
protein.
Length = 356
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 56 EHKGFKLNIWDVGGQKSLRSYWKNYFE 82
E K K ++DVGGQ+S R W + FE
Sbjct: 193 EIKKVKFRVFDVGGQRSERKKWIHCFE 219
>U41996-6|AAA83475.1| 356|Caenorhabditis elegans G protein, alpha
subunit protein 2 protein.
Length = 356
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 56 EHKGFKLNIWDVGGQKSLRSYWKNYFE 82
E K K ++DVGGQ+S R W + FE
Sbjct: 193 EIKKVKFRVFDVGGQRSERKKWIHCFE 219
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase
GLO-1 protein.
Length = 212
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 15 VSISIKVRGLDNAGKTTILKRFNGEPIDT-ISPTLG--FNIKTL---EHKGFKLNIWDVG 68
+S + V G GKT+I++RF + T+G F +K L E+ L IWD+
Sbjct: 10 ISYKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDIS 69
Query: 69 GQ 70
GQ
Sbjct: 70 GQ 71
>AY008125-1|AAG32078.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 56 EHKGFKLNIWDVGGQKSLRSYWKNYFE 82
E K K ++DVGGQ+S R W + FE
Sbjct: 193 EIKKVKFRVFDVGGQRSERKKWIHCFE 219
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like
protein.
Length = 66
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 23 GLDNAGKTTILKRFNG---EPID--TISPTLGFNIKTLEHKGFKLNIWDVGGQK 71
G GK+ +L +F +P+ TI G + T++ K KL +WD GQ+
Sbjct: 13 GDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQMWDTAGQE 66
>Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical
protein F48C11.1 protein.
Length = 364
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 47 TLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFES 83
T G N +K + DVGGQ+S R W + F++
Sbjct: 192 TTGINELAFNYKKMDFKMVDVGGQRSERRKWIHCFDN 228
>U55367-2|AAA97988.2| 356|Caenorhabditis elegans G protein, alpha
subunit protein 10 protein.
Length = 356
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 46 PTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 82
PT G + KL I D GGQ+S R W ++F+
Sbjct: 183 PTTGVAQVEVIMNNIKLMICDCGGQRSERRKWYHFFD 219
>AY008132-1|AAG32085.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 46 PTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 82
PT G + KL I D GGQ+S R W ++F+
Sbjct: 183 PTTGVAQVEVIMNNIKLMICDCGGQRSERRKWYHFFD 219
>AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 47 TLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFES 83
T G N +K + DVGGQ+S R W + F++
Sbjct: 192 TTGINELAFNYKKMDFKMVDVGGQRSERRKWIHCFDN 228
>AF039041-6|ABM01867.1| 335|Caenorhabditis elegans G protein, alpha
subunit protein 18 protein.
Length = 335
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 45 SPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 82
S T G N + + +G+K + ++ G R+ W +YF+
Sbjct: 166 SQTCGLNRENVTCQGYKFELLEMPGHHLWRAKWADYFD 203
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 10 GTMVPVSISIKVRGLDNAGKTTILKRF-NGEPIDTISPTLGFNIKT----LEHKGFKLNI 64
GT + + + G GKT+++ ++ N + T+G + T ++ + L I
Sbjct: 3 GTRKKALLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQI 62
Query: 65 WDVGGQKSLRS 75
WD GQ+ +S
Sbjct: 63 WDTAGQERFQS 73
>AY008127-1|AAG32080.1| 359|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 359
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 54 TLEHKGFKLNIWDVGGQKSLRSYWKNYFES 83
T +K ++DVGGQ+S R W + F+S
Sbjct: 191 TFMYKDLCFKMFDVGGQRSERKKWIHCFDS 220
>AF036706-13|AAK39279.2| 359|Caenorhabditis elegans G protein,
alpha subunit protein 4 protein.
Length = 359
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 54 TLEHKGFKLNIWDVGGQKSLRSYWKNYFES 83
T +K ++DVGGQ+S R W + F+S
Sbjct: 191 TFMYKDLCFKMFDVGGQRSERKKWIHCFDS 220
>Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical
protein C26C6.2 protein.
Length = 354
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 58 KGFKLNIWDVGGQKSLRSYWKNYFE 82
K ++DVGGQ+S R W + FE
Sbjct: 193 KNLNFKLFDVGGQRSERKKWIHCFE 217
>U41995-5|AAA83462.1| 354|Caenorhabditis elegans G protein, alpha
subunit protein 3 protein.
Length = 354
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 47 TLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 82
T G + K ++DVGGQ+S R W + FE
Sbjct: 182 TTGIVEVKFQMKSVDFRVFDVGGQRSERKKWIHCFE 217
>M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alpha
subunit protein.
Length = 354
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 58 KGFKLNIWDVGGQKSLRSYWKNYFE 82
K ++DVGGQ+S R W + FE
Sbjct: 193 KNLNFKLFDVGGQRSERKKWIHCFE 217
>AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 354
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 58 KGFKLNIWDVGGQKSLRSYWKNYFE 82
K ++DVGGQ+S R W + FE
Sbjct: 193 KNLNFKLFDVGGQRSERKKWIHCFE 217
>AY008126-1|AAG32079.1| 354|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 354
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 47 TLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 82
T G + K ++DVGGQ+S R W + FE
Sbjct: 182 TTGIVEVKFQMKSVDFRVFDVGGQRSERKKWIHCFE 217
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 36 FNGEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYF 81
F+ E TI ++ KL IWD GQ+ R+ +Y+
Sbjct: 9 FDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSYY 54
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.138 0.434
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,499,109
Number of Sequences: 27539
Number of extensions: 111150
Number of successful extensions: 387
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 289
Number of HSP's gapped (non-prelim): 88
length of query: 184
length of database: 12,573,161
effective HSP length: 77
effective length of query: 107
effective length of database: 10,452,658
effective search space: 1118434406
effective search space used: 1118434406
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)
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