Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000785-TA|BGIBMGA000785-PA|undefined
(177 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_1146 + 10756897-10757065,10763869-10765521,10765638-107659... 31 0.69
04_04_1081 - 30700791-30700904,30701011-30703053,30703126-30704376 31 0.69
07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,350... 29 2.1
09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539 29 2.8
01_06_0482 - 29672720-29673854,29673941-29676267 29 2.8
02_05_1276 + 35397948-35398298,35398937-35401738,35402085-354023... 28 4.9
01_05_0461 + 22446797-22447050,22447171-22447288,22447895-224482... 28 4.9
11_05_0013 + 18383235-18383702,18385570-18386571 27 6.5
10_05_0062 + 8694431-8694877 27 8.6
08_01_0027 - 195321-195932,197206-197415 27 8.6
07_03_0705 - 20846810-20848165 27 8.6
>07_01_1146 + 10756897-10757065,10763869-10765521,10765638-10765900,
10766057-10766266,10766818-10767036,10767379-10768344,
10768575-10768670,10768772-10768870,10769349-10769538,
10769623-10769855
Length = 1365
Score = 30.7 bits (66), Expect = 0.69
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 31 ISSARWKI-FPSSLRLPK---LRIKNSGYHKPRILADKSTSLTVVPQQASI 77
IS++ W PS +PK + N+GYHK R+L+ K++ V AS+
Sbjct: 1251 ISNSTWDYKIPSVDTIPKQFNAEVLNTGYHKHRVLSSKASGEPAVVLGASV 1301
>04_04_1081 - 30700791-30700904,30701011-30703053,30703126-30704376
Length = 1135
Score = 30.7 bits (66), Expect = 0.69
Identities = 25/93 (26%), Positives = 36/93 (38%), Gaps = 1/93 (1%)
Query: 1 MPESRLRHFQDKAHIYKFRTITFGPSVYRAISSARWKIFPSSLRLPKLRIKNSGYHKPRI 60
M +LRH+ + + G ++ + R + L L + K +
Sbjct: 976 MASRKLRHYFQAHRVTVVTSYPLGQILHNREGTGRVVKWAIELSEFDLHFEPRHAIKSQA 1035
Query: 61 LADKSTSLTVVPQQASIA-ASTGPSQPTHRASW 92
LAD T P+ SI AST PSQ H A W
Sbjct: 1036 LADFVAEWTPAPETVSIPEASTDPSQLPHTAHW 1068
>07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,
3505561-3505653,3505926-3506891,3507267-3507485,
3508038-3508247,3508371-3508630,3508956-3510737,
3510796-3511009
Length = 1414
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 31 ISSARWKI-FPSSLRLPK---LRIKNSGYHKPRILADKSTSLTVVPQQASIAAST 81
+S W P+ +PK +++ NSG+HK R+L+ K++ + AS+ +T
Sbjct: 1307 VSDGTWTYKIPTVDTIPKQFNVKLLNSGFHKKRVLSSKASGEPPLLLAASVHCAT 1361
>09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539
Length = 1908
Score = 28.7 bits (61), Expect = 2.8
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 1/93 (1%)
Query: 1 MPESRLRHFQDKAHIYKFRTITFGPSVYRAISSARWKIFPSSLRLPKLRIKNSGYHKPRI 60
M +LRH+ + + G ++ + R + L L + K +
Sbjct: 1219 MASRKLRHYFQAHRVTVVTSYPLGQILHNREGTGRVVKWAIELSEFDLHFEPRHAIKSQA 1278
Query: 61 LADKSTSLTVVPQQASIA-ASTGPSQPTHRASW 92
LA+ T P+ SI AST PSQ H A W
Sbjct: 1279 LANFVVEWTPAPEPVSIPEASTDPSQLPHTAHW 1311
>01_06_0482 - 29672720-29673854,29673941-29676267
Length = 1153
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 42 SLRLPKLRIKNSGYHKPRILADKSTSLTVVPQQASIAASTGPSQPTHRASWSY 94
SL LP + N HKPR+ ST ++P +S ++S+ + + +S S+
Sbjct: 49 SLPLPAPSVANQARHKPRLKPSSSTR-KLLPSASSSSSSSAAAAASTSSSSSF 100
>02_05_1276 +
35397948-35398298,35398937-35401738,35402085-35402306,
35402503-35402562,35402615-35402698,35402740-35402816,
35403147-35403363
Length = 1270
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 45 LPKLRIKNSGYHKPRILADKSTSLTVVPQQASIAASTGPSQPTHRAS 91
L K R+ S H +A SL + +A S P++PTHRAS
Sbjct: 136 LKKFRLLQSSKHA---IAPFVKSLVAPAVPSKVARSNTPTKPTHRAS 179
>01_05_0461 +
22446797-22447050,22447171-22447288,22447895-22448217,
22448908-22449056,22449324-22449463,22449606-22449757,
22449862-22450021,22450071-22450088
Length = 437
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 78 AASTGPSQPTHRASWSYGTQLHCLITPQQFIAAHDRIINAWGHTSPAWQ 126
A+STG +P +W+ G++ L F AA+ ++ + + WQ
Sbjct: 26 ASSTGEERPDLPWAWALGSERRVLALALAFRAANALLVRTYFNPDEHWQ 74
>11_05_0013 + 18383235-18383702,18385570-18386571
Length = 489
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Query: 15 IYKFRTITFGPSVY----RAISSARWKIFPSSLRLPKLR 49
+YKF TFGP V ++ +++ F +LR KLR
Sbjct: 107 VYKFNVPTFGPGVVFDVDYSVRQEQFRFFTEALRANKLR 145
>10_05_0062 + 8694431-8694877
Length = 148
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 121 TSPAWQLCTHELLATRTQHPSSVSTHRRFRAALATR 156
T+ AW +C+ + A R +H ++ + +F A+ATR
Sbjct: 23 TAAAW-ICSAVVAAARMRHAAATAAPMQFVVAMATR 57
>08_01_0027 - 195321-195932,197206-197415
Length = 273
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 13 AHIYKFRTITFGPSVYRAISSAR---WKIFPSSLRLP 46
+ + ++R TFGPS YR S + W FPS + P
Sbjct: 11 SRLAQWRIDTFGPSSYRRSDSFKIGIWNWFPSQSQSP 47
>07_03_0705 - 20846810-20848165
Length = 451
Score = 27.1 bits (57), Expect = 8.6
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Query: 60 ILADKSTSLTVVPQQASIAASTGPSQPTHRASWSYGTQLHCLITPQQFIAAHDRIINAWG 119
+LAD +SL + P+ P AS S ++L C + QF+ + NA G
Sbjct: 105 VLADTGSSLIWTQCAPCTECAARPAPPFQPASSSTFSKLPCASSLCQFLTSPYLTCNATG 164
Query: 120 --HTSPAWQLCTHELLATRTQHPSSVS 144
+ P T LAT T H S
Sbjct: 165 CVYYYPYGMGFTAGYLATETLHVGGAS 191
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.322 0.129 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,781,027
Number of Sequences: 37544
Number of extensions: 181326
Number of successful extensions: 437
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 433
Number of HSP's gapped (non-prelim): 11
length of query: 177
length of database: 14,793,348
effective HSP length: 77
effective length of query: 100
effective length of database: 11,902,460
effective search space: 1190246000
effective search space used: 1190246000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 57 (27.1 bits)
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