GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000782-TA|BGIBMGA000782-PA|undefined
         (270 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3SKD9 Cluster: Putative uncharacterized protein; n=1; ...    35   1.9  
UniRef50_Q29HT8 Cluster: GA18871-PA; n=1; Drosophila pseudoobscu...    35   1.9  
UniRef50_Q2UN97 Cluster: Predicted protein; n=1; Aspergillus ory...    33   5.8  
UniRef50_Q4SBU5 Cluster: Chromosome 19 SCAF14664, whole genome s...    33   7.7  
UniRef50_A0U307 Cluster: Putative uncharacterized protein; n=2; ...    33   7.7  

>UniRef50_A3SKD9 Cluster: Putative uncharacterized protein; n=1;
           Roseovarius nubinhibens ISM|Rep: Putative
           uncharacterized protein - Roseovarius nubinhibens ISM
          Length = 129

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)

Query: 222 TESRDVLRATCRRASVRSRCGPVMQTSSDSPRALATQHVTRTTASLGCT 270
           T S   L  TCR AS+   C P + +SS+S  AL  +H  R  AS+ C+
Sbjct: 28  TPSARSLTITCRIASIIEGCNPSVGSSSNS--ALGRRHSARAVASICCS 74


>UniRef50_Q29HT8 Cluster: GA18871-PA; n=1; Drosophila
           pseudoobscura|Rep: GA18871-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 1250

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 1/92 (1%)

Query: 93  GKYSRHVTVGAARSHCIATYSEGHTRHTRSDPLAPCTALGDQTFHIVLIRHRAVIESFSS 152
           G +SR  +  + RS  I      H R +R   L P   + DQ F I+ + +R    S   
Sbjct: 468 GSHSRSASASSTRSTDIVLQYSNHVRISRQQNLNPPPPI-DQLFSIIFVLNRNKSHSIIG 526

Query: 153 INHPTFNNALLTESVQVYVSVSNLIANVSVRS 184
           ++   + ++L        V++ N + N  ++S
Sbjct: 527 LHSSKYESSLKDNYSSKNVNLKNQLLNGGIKS 558


>UniRef50_Q2UN97 Cluster: Predicted protein; n=1; Aspergillus
           oryzae|Rep: Predicted protein - Aspergillus oryzae
          Length = 531

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 40/169 (23%), Positives = 65/169 (38%), Gaps = 13/169 (7%)

Query: 103 AARSHCIATYSEGHTRHTRSDPLAPCT-----ALGDQTFHIVLIRHRAVIESFSSINHPT 157
           A  +H   T + GH+  + S    P T     +L D    + ++R  +V  + S I  PT
Sbjct: 90  APATHTTNTLTHGHSTPSVSTSKTPDTTHSTSSLADTHSAVAVVRASSVPVASSEIAEPT 149

Query: 158 FNNALLTESVQVYVSVSNLIANVSVRSRASLRGQDERTWHWSLHRLAALLEPXXXXXXXX 217
                +T ++  + SV+ + +   +   + L G    TW  +  +  + L P        
Sbjct: 150 VTTTTVTSTIFKHHSVTVISSGTQLSHSSRLFGASSSTWKTT--KFTSNLLPKVSATSIS 207

Query: 218 XXXXTESRDVLRATCRRASVRSRCGPVMQTSSDSPRALATQHVTRTTAS 266
                      RAT    SV+S    + QTSS   R        R+TAS
Sbjct: 208 PSTSFS----WRATPTSTSVQS--STITQTSSHLFRGSTATTDIRSTAS 250


>UniRef50_Q4SBU5 Cluster: Chromosome 19 SCAF14664, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 19
           SCAF14664, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 694

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 116 HTRHTRSDPLAPCTALGDQTFHIVLIRHRAVIESFSSINHP 156
           H  H+R++ + P   L D T   ++I H  V +S SS  HP
Sbjct: 371 HGEHSRNNRMVPMVTLSDSTAVGLVIAHGTVGDSLSSSQHP 411


>UniRef50_A0U307 Cluster: Putative uncharacterized protein; n=2;
           Burkholderia cepacia complex|Rep: Putative
           uncharacterized protein - Burkholderia cenocepacia MC0-3
          Length = 591

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 12/141 (8%)

Query: 58  IDIICTVLCTLYTVHRLDSIGIITSHT------RGYDHIAKGKYSRHVTVGAARSHCIAT 111
           +D +  V   +  V R D IG   +H       + ++H+ + ++   +  GA R    A 
Sbjct: 105 VDQLADVARPVVLVERRDRIGREPAHAMARVAAKAFEHVVREQFDV-LAAGAQRRLVDAH 163

Query: 112 YSEGHTRHTRSDPLAPCTALGDQTFHIVLIRHRAVIESFSSINHPTFNNALLTESVQVYV 171
           ++E   +     P   C A  D     V  RH   ++     +  T N  LL +S Q  +
Sbjct: 164 HAETVEQVGAKTPFFHCLAQID-----VRCRHDPDVDRHRIASAKTMNRTLLQKSQQARL 218

Query: 172 SVSNLIANVSVRSRASLRGQD 192
           +    +A+   + RA++RG D
Sbjct: 219 AFVRQVADFVEQQRAAVRGFD 239


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.322    0.130    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,941,166
Number of Sequences: 1657284
Number of extensions: 8042232
Number of successful extensions: 15783
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 15782
Number of HSP's gapped (non-prelim): 5
length of query: 270
length of database: 575,637,011
effective HSP length: 99
effective length of query: 171
effective length of database: 411,565,895
effective search space: 70377768045
effective search space used: 70377768045
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 72 (33.1 bits)