GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000781-TA|BGIBMGA000781-PA|undefined
         (152 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1ZJ97 Cluster: Tetratricopeptide repeat domain protein...    32   4.7  

>UniRef50_A1ZJ97 Cluster: Tetratricopeptide repeat domain protein;
           n=1; Microscilla marina ATCC 23134|Rep:
           Tetratricopeptide repeat domain protein - Microscilla
           marina ATCC 23134
          Length = 511

 Score = 32.3 bits (70), Expect = 4.7
 Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 11/85 (12%)

Query: 34  ARVDYKLYKVRRAAYA-----DTATEHWFQAFQGYAPMFYDIAIQLFCSAIDCGKNPSQV 88
           A+ D  +Y  R+AA A     + A  H   AF G    +Y +AIQ +  A D  K P   
Sbjct: 49  AQPDSAIYYARQAASATQKPQEQANAHNLLAFYGLNQGYYGLAIQHYQQAYDLYKQP--- 105

Query: 89  KLLQKKTISSNLHKTCIQNEVHVQA 113
             +QK T+  N+   C +N  + QA
Sbjct: 106 --IQKATMLKNM-AFCHKNTGNYQA 127


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.327    0.136    0.433 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,495,551
Number of Sequences: 1657284
Number of extensions: 4626417
Number of successful extensions: 10282
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 10282
Number of HSP's gapped (non-prelim): 1
length of query: 152
length of database: 575,637,011
effective HSP length: 94
effective length of query: 58
effective length of database: 419,852,315
effective search space: 24351434270
effective search space used: 24351434270
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 68 (31.5 bits)