GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000781-TA|BGIBMGA000781-PA|undefined
         (152 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   3.2  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    22   9.8  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)

Query: 63  YAPMFYDIAIQLFCSAIDCGKNPSQVKLLQKKTISSN-LHK 102
           Y P+  D+   +  S ++C K+P  V +L  + I  N +HK
Sbjct: 858 YRPL-RDVHGTVVLSCVNCIKSPKAVSVLNSRWIPLNKIHK 897


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 12/37 (32%), Positives = 15/37 (40%)

Query: 69   DIAIQLFCSAIDCGKNPSQVKLLQKKTISSNLHKTCI 105
            D   QL+   I  G NP        KT+   L K C+
Sbjct: 2012 DSVAQLYKQQIRKGVNPDMSNKSVTKTVKFFLPKKCV 2048


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.327    0.136    0.433 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,526
Number of Sequences: 2123
Number of extensions: 5197
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 2
length of query: 152
length of database: 516,269
effective HSP length: 59
effective length of query: 93
effective length of database: 391,012
effective search space: 36364116
effective search space used: 36364116
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 44 (21.8 bits)