Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000781-TA|BGIBMGA000781-PA|undefined
(152 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical p... 29 1.9
Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical p... 29 1.9
Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical p... 29 1.9
Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical pr... 29 1.9
AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase... 29 1.9
Z83224-1|CAB05720.1| 994|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z81071-8|CAB03016.1| 317|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z79754-14|CAB02102.1| 994|Caenorhabditis elegans Hypothetical p... 28 3.3
U28943-8|AAK68293.1| 325|Caenorhabditis elegans Serpentine rece... 27 4.4
L07144-8|AAK21442.1| 421|Caenorhabditis elegans Hypothetical pr... 27 4.4
>Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 28.7 bits (61), Expect = 1.9
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 35 RVDYKLYKVRRAAYADTATEHWFQAFQGYAPMFYDIAIQLFCSAIDCGKNPSQVKLLQKK 94
R+ Y L+ A+ ++TE +Q F PM Y + +++ +NPS V+ L K+
Sbjct: 59 RLQYILHFPEEVAFQLSSTE--YQLFYSIQPMDYVRYVSCDLTSVPVSENPSPVRNLVKR 116
Query: 95 --TISSNLHKTCIQNEVH 110
+SS + + H
Sbjct: 117 LSEVSSWITHVIVSQPTH 134
>Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 28.7 bits (61), Expect = 1.9
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 35 RVDYKLYKVRRAAYADTATEHWFQAFQGYAPMFYDIAIQLFCSAIDCGKNPSQVKLLQKK 94
R+ Y L+ A+ ++TE +Q F PM Y + +++ +NPS V+ L K+
Sbjct: 59 RLQYILHFPEEVAFQLSSTE--YQLFYSIQPMDYVRYVSCDLTSVPVSENPSPVRNLVKR 116
Query: 95 --TISSNLHKTCIQNEVH 110
+SS + + H
Sbjct: 117 LSEVSSWITHVIVSQPTH 134
>Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 28.7 bits (61), Expect = 1.9
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 35 RVDYKLYKVRRAAYADTATEHWFQAFQGYAPMFYDIAIQLFCSAIDCGKNPSQVKLLQKK 94
R+ Y L+ A+ ++TE +Q F PM Y + +++ +NPS V+ L K+
Sbjct: 59 RLQYILHFPEEVAFQLSSTE--YQLFYSIQPMDYVRYVSCDLTSVPVSENPSPVRNLVKR 116
Query: 95 --TISSNLHKTCIQNEVH 110
+SS + + H
Sbjct: 117 LSEVSSWITHVIVSQPTH 134
>Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 28.7 bits (61), Expect = 1.9
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 35 RVDYKLYKVRRAAYADTATEHWFQAFQGYAPMFYDIAIQLFCSAIDCGKNPSQVKLLQKK 94
R+ Y L+ A+ ++TE +Q F PM Y + +++ +NPS V+ L K+
Sbjct: 59 RLQYILHFPEEVAFQLSSTE--YQLFYSIQPMDYVRYVSCDLTSVPVSENPSPVRNLVKR 116
Query: 95 --TISSNLHKTCIQNEVH 110
+SS + + H
Sbjct: 117 LSEVSSWITHVIVSQPTH 134
>Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 28.7 bits (61), Expect = 1.9
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 35 RVDYKLYKVRRAAYADTATEHWFQAFQGYAPMFYDIAIQLFCSAIDCGKNPSQVKLLQKK 94
R+ Y L+ A+ ++TE +Q F PM Y + +++ +NPS V+ L K+
Sbjct: 59 RLQYILHFPEEVAFQLSSTE--YQLFYSIQPMDYVRYVSCDLTSVPVSENPSPVRNLVKR 116
Query: 95 --TISSNLHKTCIQNEVH 110
+SS + + H
Sbjct: 117 LSEVSSWITHVIVSQPTH 134
>Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 28.7 bits (61), Expect = 1.9
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 35 RVDYKLYKVRRAAYADTATEHWFQAFQGYAPMFYDIAIQLFCSAIDCGKNPSQVKLLQKK 94
R+ Y L+ A+ ++TE +Q F PM Y + +++ +NPS V+ L K+
Sbjct: 59 RLQYILHFPEEVAFQLSSTE--YQLFYSIQPMDYVRYVSCDLTSVPVSENPSPVRNLVKR 116
Query: 95 --TISSNLHKTCIQNEVH 110
+SS + + H
Sbjct: 117 LSEVSSWITHVIVSQPTH 134
>AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase C
PLC210 protein.
Length = 1898
Score = 28.7 bits (61), Expect = 1.9
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 35 RVDYKLYKVRRAAYADTATEHWFQAFQGYAPMFYDIAIQLFCSAIDCGKNPSQVKLLQKK 94
R+ Y L+ A+ ++TE +Q F PM Y + +++ +NPS V+ L K+
Sbjct: 59 RLQYILHFPEEVAFQLSSTE--YQLFYSIQPMDYVRYVSCDLTSVPVSENPSPVRNLVKR 116
Query: 95 --TISSNLHKTCIQNEVH 110
+SS + + H
Sbjct: 117 LSEVSSWITHVIVSQPTH 134
>Z83224-1|CAB05720.1| 994|Caenorhabditis elegans Hypothetical
protein F25H2.13 protein.
Length = 994
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 56 WFQAFQGYAPMFYDIAIQLFCSAIDCGKNPSQVKLLQKKTISSNLH 101
W + FQ + P+F LF + + ++ ++K L KK + S +H
Sbjct: 949 WDEVFQRFRPIFVPHKADLFIACSNVLRSEDKMKYL-KKALESKIH 993
>Z81071-8|CAB03016.1| 317|Caenorhabditis elegans Hypothetical
protein F28F8.6 protein.
Length = 317
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 33 PARVDYKLYKVRRAAYADTATEHWF 57
PA VDYK + AY EHWF
Sbjct: 95 PAMVDYKNNPLTARAYICNLREHWF 119
>Z79754-14|CAB02102.1| 994|Caenorhabditis elegans Hypothetical
protein F25H2.13 protein.
Length = 994
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 56 WFQAFQGYAPMFYDIAIQLFCSAIDCGKNPSQVKLLQKKTISSNLH 101
W + FQ + P+F LF + + ++ ++K L KK + S +H
Sbjct: 949 WDEVFQRFRPIFVPHKADLFIACSNVLRSEDKMKYL-KKALESKIH 993
>U28943-8|AAK68293.1| 325|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 58 protein.
Length = 325
Score = 27.5 bits (58), Expect = 4.4
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 3 IFRATNYGVRCAICTGRLFIFTRSGVRNHIPARVDY 38
IF ATN+G CAI LF F V+N + A Y
Sbjct: 99 IFMATNFGAGCAIAITVLFRFFVL-VQNQVSANQTY 133
>L07144-8|AAK21442.1| 421|Caenorhabditis elegans Hypothetical
protein R05D3.3 protein.
Length = 421
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 11 VRCAICTGRLFIFTRSGVRNHIPARVDYKLYKVRRAAYA 49
V C IC +I +R+ +NHI A ++Y+ YK +YA
Sbjct: 207 VLCVICNE--WICSRNR-KNHIEAHLNYRPYKCSACSYA 242
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.327 0.136 0.433
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,379,723
Number of Sequences: 27539
Number of extensions: 114398
Number of successful extensions: 300
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 299
Number of HSP's gapped (non-prelim): 12
length of query: 152
length of database: 12,573,161
effective HSP length: 75
effective length of query: 77
effective length of database: 10,507,736
effective search space: 809095672
effective search space used: 809095672
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 56 (26.6 bits)
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