Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000778-TA|BGIBMGA000778-PA|IPR006786|Pinin/SDK/memA
protein
         (395 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.71 
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   3.8  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.4 bits (53), Expect = 0.71
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 5/79 (6%)

Query: 251 EKLDLSQMYHDKCV--IKKREELQDELSRIEQRCTKRFHQQGPEQNGQQ--VKEEKPDKK 306
           + ++L + YH +      +RE    E S I +RC+ R     PE+  +   V      + 
Sbjct: 784 QTMNLLRSYHQQQSHHYGRRERSGSESSSISERCSSRVESLTPERKMEPPGVPLNSTPRS 843

Query: 307 TRDKFAADTERDDS-DADG 324
           T DK       D + +ADG
Sbjct: 844 TPDKREKSPTSDKAQEADG 862



 Score = 25.0 bits (52), Expect = 0.94
 Identities = 15/72 (20%), Positives = 29/72 (40%)

Query: 120 PTRAAILKAQGDDEQARTRNRRIFGSLLGTLQKFKQEEIELQTKEDKKAQVERKIEEQAR 179
           P  ++ILK  G DE        +    +  L+ + Q++     + ++       I E+  
Sbjct: 759 PMGSSILKRLGIDESVDYTKPLVDAQTMNLLRSYHQQQSHHYGRRERSGSESSSISERCS 818

Query: 180 LQKEKEFRERKV 191
            + E    ERK+
Sbjct: 819 SRVESLTPERKM 830


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 5/115 (4%)

Query: 87  FSRISARADNSDGEDDLPTNKRVRVSSAVCRELPTRAAILKAQGDDEQARTRNRRIFGSL 146
           F++     D+   +  LPT+    + +    ++P  A+  K++G        N ++   L
Sbjct: 281 FAQFGPVIDSWATQPVLPTHPYQIIKNQQVYDVPWIASFTKSEGLYHLDEVYNNQLLTRL 340

Query: 147 LGTLQKFKQEEIELQTKEDKKAQ--VERKIEEQARLQKE---KEFRERKVMFAER 196
                K+    +      D+  Q  V +KI +    +K+   K FRE   MF++R
Sbjct: 341 DDNWNKYIPAILYYNYTVDRDLQDEVSQKIRKYYLGEKKLSKKTFRELVTMFSDR 395


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.309    0.127    0.346 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,032
Number of Sequences: 317
Number of extensions: 3447
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 3
length of query: 395
length of database: 114,650
effective HSP length: 58
effective length of query: 337
effective length of database: 96,264
effective search space: 32440968
effective search space used: 32440968
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 44 (21.8 bits)