BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000777-TA|BGIBMGA000777-PA|IPR002018|Carboxylesterase, type B (1064 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g01660.1 68417.m00216 ABC1 family protein contains Pfam domai... 41 0.005 At3g02410.1 68416.m00228 hypothetical protein weak similarity to... 41 0.005 At5g15860.2 68418.m01856 expressed protein 38 0.027 At5g15860.1 68418.m01855 expressed protein 38 0.027 At4g14570.1 68417.m02243 acylaminoacyl-peptidase-related similar... 37 0.062 At1g26120.1 68414.m03188 esterase-related contains similaity to ... 36 0.14 At1g28400.1 68414.m03492 expressed protein similar to E6 (GI:100... 34 0.44 At1g33610.1 68414.m04160 leucine-rich repeat family protein cont... 32 2.3 At3g58640.2 68416.m06536 protein kinase family protein contains ... 31 3.1 At3g58640.1 68416.m06535 protein kinase family protein contains ... 31 3.1 At1g23950.3 68414.m03023 expressed protein 31 3.1 At1g71300.1 68414.m08228 Vps52/Sac2 family protein similar to SP... 31 4.1 At5g64030.1 68418.m08039 dehydration-responsive protein-related ... 30 9.4 At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 30 9.4 At3g09180.1 68416.m01090 expressed protein 30 9.4 At2g25320.1 68415.m03029 meprin and TRAF homology domain-contain... 30 9.4 >At4g01660.1 68417.m00216 ABC1 family protein contains Pfam domain, PF03109: ABC1 family Length = 623 Score = 40.7 bits (91), Expect = 0.005 Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 11/196 (5%) Query: 794 NDTNNSHKLLKYLRKLSVTVLLD-AHKISLP--CVESVNNAESLIDKDPLQLLKDGPIDN 850 +D N +LL Y + + LD A K++ E E++ K LL D P Sbjct: 335 SDIENVRRLLNYTNLIPKGLFLDRAIKVAKEELAQECDYEIEAVSQKRFRDLLSDTPGFY 394 Query: 851 IPMLVSYTRLKLRHNSEKLKTVPEDFVDLLPSNLEFTNDGIRYKISEL-IKDFYFFKDID 909 +P++V T K +E + +P D V LL T D + K+ EL +K+ + F+ + Sbjct: 395 VPLVVDETSSKKILTTELISGIPIDKVALLDQK---TRDYVGRKMLELTLKELFVFRFMQ 451 Query: 910 TSSSYENYL-NDVLMVYPTVKY-AVLYATKNYFNVYL--MNFNYEADADVLSEQNKKLVD 965 T ++ N+L N+ + + A K + + YL + E D++ + E +++L Sbjct: 452 TDPNWGNFLYNEATKTINLIDFGAARDYPKKFVDDYLRMVMACAEKDSEGVIEMSRRLGF 511 Query: 966 FIFGENDLNYNKNNEA 981 E+D+ + + +A Sbjct: 512 LTGDESDVMLDAHVQA 527 >At3g02410.1 68416.m00228 hypothetical protein weak similarity to kynurenine formamidase [Mus musculus] GI:21552719 Length = 422 Score = 40.7 bits (91), Expect = 0.005 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 14/106 (13%) Query: 644 INIFTPEVSNNL-PVLVHVHGGDYQNG---WGFHQPPINLINKGIIIVTFNYRIGVLGFL 699 ++++ P S+ L PV+V V GG + G WG + L + II+ +YR Sbjct: 138 LDLYIPPTSDGLKPVVVFVTGGAWIIGYKAWG-SLLGLQLAERDIIVACLDYR------- 189 Query: 700 CLGIPAAPGNVGLKDQVAALYWIQQNIKRFGGDPNDVTLYGTEAGS 745 P + + D + ++ NI FGGDPN + L G AG+ Sbjct: 190 --NFPQGTISDMVSDAAQGISFVCNNISAFGGDPNRIYLMGQSAGA 233 Score = 35.9 bits (79), Expect = 0.14 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 8/74 (10%) Query: 256 LKDLSMALQWIKNNIAKFGGNPDTIVVSGEGTSGALIGFLALSSSSRNYFDKAITESGSV 315 + D + + ++ NNI+ FGG+P+ I + G+ ++GA I AL F++AI ES Sbjct: 200 VSDAAQGISFVCNNISAFGGDPNRIYLMGQ-SAGAHISSCAL-------FEQAIKESRGE 251 Query: 316 LSYWALDRNPALTG 329 W++ + A G Sbjct: 252 SISWSVSQIKAYFG 265 >At5g15860.2 68418.m01856 expressed protein Length = 299 Score = 38.3 bits (85), Expect = 0.027 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 14/113 (12%) Query: 637 GDENCLVINIFTPEVSNNL-PVLVHVHGGDYQNG---WGFHQPPINLINKGIIIVTFNYR 692 GD+ ++++ P ++ L PV+V V GG + G WG + L + II+ +YR Sbjct: 136 GDQPRNRLDLYLPSNNDGLKPVVVFVTGGAWIIGYKAWG-SLLGMQLAERDIIVACLDYR 194 Query: 693 IGVLGFLCLGIPAAPGNVGLKDQVAALYWIQQNIKRFGGDPNDVTLYGTEAGS 745 P + + D + ++ NI FGGDPN + L G AG+ Sbjct: 195 ---------NFPQGTISDMVTDASQGISFVCNNISAFGGDPNRIYLMGQSAGA 238 Score = 37.5 bits (83), Expect = 0.047 Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 13/129 (10%) Query: 171 QLQGESVVGSQDCLTLSIFAPTNAENVS--VLFHIHESNFVQGSADPALYGPEYLVSKGL 228 Q++ V G Q L ++ P+N + + V+F + + A +L G + L + + Sbjct: 128 QVRRSIVYGDQPRNRLDLYLPSNNDGLKPVVVFVTGGAWIIGYKAWGSLLGMQ-LAERDI 186 Query: 229 ILVLPNYRLGPLGFLCLRNTMAPGNAALKDLSMALQWIKNNIAKFGGNPDTIVVSGEGTS 288 I+ +YR P G + + + D S + ++ NNI+ FGG+P+ I + G+ ++ Sbjct: 187 IVACLDYRNFPQGTI---------SDMVTDASQGISFVCNNISAFGGDPNRIYLMGQ-SA 236 Query: 289 GALIGFLAL 297 GA I AL Sbjct: 237 GAHIAACAL 245 >At5g15860.1 68418.m01855 expressed protein Length = 427 Score = 38.3 bits (85), Expect = 0.027 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 14/113 (12%) Query: 637 GDENCLVINIFTPEVSNNL-PVLVHVHGGDYQNG---WGFHQPPINLINKGIIIVTFNYR 692 GD+ ++++ P ++ L PV+V V GG + G WG + L + II+ +YR Sbjct: 136 GDQPRNRLDLYLPSNNDGLKPVVVFVTGGAWIIGYKAWG-SLLGMQLAERDIIVACLDYR 194 Query: 693 IGVLGFLCLGIPAAPGNVGLKDQVAALYWIQQNIKRFGGDPNDVTLYGTEAGS 745 P + + D + ++ NI FGGDPN + L G AG+ Sbjct: 195 ---------NFPQGTISDMVTDASQGISFVCNNISAFGGDPNRIYLMGQSAGA 238 Score = 37.5 bits (83), Expect = 0.047 Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 13/129 (10%) Query: 171 QLQGESVVGSQDCLTLSIFAPTNAENVS--VLFHIHESNFVQGSADPALYGPEYLVSKGL 228 Q++ V G Q L ++ P+N + + V+F + + A +L G + L + + Sbjct: 128 QVRRSIVYGDQPRNRLDLYLPSNNDGLKPVVVFVTGGAWIIGYKAWGSLLGMQ-LAERDI 186 Query: 229 ILVLPNYRLGPLGFLCLRNTMAPGNAALKDLSMALQWIKNNIAKFGGNPDTIVVSGEGTS 288 I+ +YR P G + + + D S + ++ NNI+ FGG+P+ I + G+ ++ Sbjct: 187 IVACLDYRNFPQGTI---------SDMVTDASQGISFVCNNISAFGGDPNRIYLMGQ-SA 236 Query: 289 GALIGFLAL 297 GA I AL Sbjct: 237 GAHIAACAL 245 >At4g14570.1 68417.m02243 acylaminoacyl-peptidase-related similar to Acylamino-acid-releasing enzyme (EC 3.4.19.1) (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase) (Swiss-Prot:P13676) [Rattus norvegicus]; annotated with nonconsensus TT and CT acceptor splice sites. Length = 764 Score = 37.1 bits (82), Expect = 0.062 Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 3/101 (2%) Query: 656 PVLVHVHGGDYQ-NGWGFHQPPINLINKGIIIVTFNYRIGVLGFLCLGIPAAPGNVGLKD 714 P++ +HGG + + F + L + G + NYR G LG+ + + PG VG +D Sbjct: 532 PLIAVLHGGPHSVSPCSFSRTMAYLSSIGYSQLIINYR-GSLGYGEDALQSLPGKVGSQD 590 Query: 715 QVAALYWIQQNIKRFGGDPNDVT-LYGTEAGSISIQLLLQA 754 L + I+ DP+ +T L G+ G ++ L+ QA Sbjct: 591 VKDCLLAVDHAIEMGIADPSRITVLGGSHGGFLTTHLIGQA 631 >At1g26120.1 68414.m03188 esterase-related contains similaity to esterase 6 GI:606998 from [Drosophila simulans] and esterase GI:12584120 from [Sphingomonas elodea] Length = 476 Score = 35.9 bits (79), Expect = 0.14 Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 13/125 (10%) Query: 170 PQLQGESVVGSQDCLTLSIFAPTNAENVS-VLFHIHESNFVQG-SADPALYGPEYLVSKG 227 P ++ V G Q L ++ P N+ V+ + ++ G A +L G + L + Sbjct: 178 PYVRRSIVYGDQPRNRLDLYLPKNSTGPKPVVAFVTGGAWIIGYKAWGSLLGQQ-LSERD 236 Query: 228 LILVLPNYRLGPLGFLCLRNTMAPGNAALKDLSMALQWIKNNIAKFGGNPDTIVVSGEGT 287 +I+ +YR P G + + +KD S + ++ N+IA++GG+PD I + G+ + Sbjct: 237 IIVACIDYRNFPQGSI---------SDMVKDASSGISFVCNHIAEYGGDPDRIYLMGQ-S 286 Query: 288 SGALI 292 +GA I Sbjct: 287 AGAHI 291 Score = 31.9 bits (69), Expect = 2.3 Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 14/113 (12%) Query: 637 GDENCLVINIFTPEVSNN-LPVLVHVHGGDYQNG---WGFHQPPINLINKGIIIVTFNYR 692 GD+ ++++ P+ S PV+ V GG + G WG L + II+ +YR Sbjct: 187 GDQPRNRLDLYLPKNSTGPKPVVAFVTGGAWIIGYKAWGSLLGQ-QLSERDIIVACIDYR 245 Query: 693 IGVLGFLCLGIPAAPGNVGLKDQVAALYWIQQNIKRFGGDPNDVTLYGTEAGS 745 P + +KD + + ++ +I +GGDP+ + L G AG+ Sbjct: 246 ---------NFPQGSISDMVKDASSGISFVCNHIAEYGGDPDRIYLMGQSAGA 289 >At1g28400.1 68414.m03492 expressed protein similar to E6 (GI:1000090) [Gossypium barbadense] Length = 335 Score = 34.3 bits (75), Expect = 0.44 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 6/71 (8%) Query: 909 DTSSSYENYLNDVLMVYPTVKYAVLYATKNYFNVYLMNFNYEADADVLSEQNKKLVDFIF 968 +T S+ NY + YP K Y TK Y N N N + DA+ E N D + Sbjct: 123 ETEESFNNYEEN----YP--KKTENYGTKGYNNEEFNNNNNKYDANFKEEFNNNKYDENY 176 Query: 969 GENDLNYNKNN 979 + + N N NN Sbjct: 177 AKEEFNNNNNN 187 >At1g33610.1 68414.m04160 leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611 Length = 907 Score = 31.9 bits (69), Expect = 2.3 Identities = 30/128 (23%), Positives = 55/128 (42%), Gaps = 6/128 (4%) Query: 791 LGYNDTNNSHKLLKYLRKLSV--TVLLDAHKISLPCVESVNNAESLIDKDPLQLLKDGPI 848 L + N S + YL + T++L +K S S N ++ + D L GP Sbjct: 681 LDLSQNNLSGTIPNYLSRFEALSTLVLSKNKYSGVVPMSFTNLINITNLDLSHNLLTGPF 740 Query: 849 DNIPMLVSYTRLKLRHNSEKLKTVPEDFVDLLPS--NLEFTNDGIRYKISE-LIKDFYFF 905 + + L L +N LKT+P+ + PS +L+ G++ + + + Y++ Sbjct: 741 PVLKSINGIESLDLSYNKFHLKTIPKWMIS-SPSIYSLKLAKCGLKISLDDWKLAGTYYY 799 Query: 906 KDIDTSSS 913 ID S + Sbjct: 800 DSIDLSEN 807 >At3g58640.2 68416.m06536 protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719 Length = 809 Score = 31.5 bits (68), Expect = 3.1 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 382 IREQEVNITFMIGS---ANYAGLNEALDQNEASIEQLNDDFATLLPDDLAFGSDIER 435 IR + ++IT IG +NEAL QN S EQ +DD + P+D S +++ Sbjct: 412 IRRRSISITPEIGDDIVRAVRAMNEALKQNRLSKEQGDDDSSPNSPNDRTESSHLQK 468 >At3g58640.1 68416.m06535 protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719 Length = 809 Score = 31.5 bits (68), Expect = 3.1 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 382 IREQEVNITFMIGS---ANYAGLNEALDQNEASIEQLNDDFATLLPDDLAFGSDIER 435 IR + ++IT IG +NEAL QN S EQ +DD + P+D S +++ Sbjct: 412 IRRRSISITPEIGDDIVRAVRAMNEALKQNRLSKEQGDDDSSPNSPNDRTESSHLQK 468 >At1g23950.3 68414.m03023 expressed protein Length = 368 Score = 31.5 bits (68), Expect = 3.1 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 6/81 (7%) Query: 591 LSRLNLWTNIYNNYFIEMRNNAPKPPPRWDGVFEATHRVKCPQLDIG--DENCLVINIFT 648 L + N+ N +++++ + + P P G + T +V+ + G D NC + Sbjct: 88 LMKFNMLPNYISSFYMTLLAHDPDPAA---GSSQKTFQVRVDEQQFGSLDINCSIARP-K 143 Query: 649 PEVSNNLPVLVHVHGGDYQNG 669 EVS P + H HGG +G Sbjct: 144 HEVSTETPFMPHFHGGALGDG 164 >At1g71300.1 68414.m08228 Vps52/Sac2 family protein similar to SP|P39904 SAC2 protein {Saccharomyces cerevisiae}; contains Pfam profile PF04129: Vps52 / Sac2 family Length = 701 Score = 31.1 bits (67), Expect = 4.1 Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 11/113 (9%) Query: 928 VKYAVLYATKNYFNVYLMNFNYEADADVLSEQNKK--LVDFIFGENDLNYNKNNEAIQKL 985 +K A L+ V+L+N NY+ VL E + + F E L N + A + L Sbjct: 528 LKLAKLFPRPKQQMVFLIN-NYDMTIAVLKEAEPEGGKIQMHF-EELLKSNTSLFAEELL 585 Query: 986 TNLFSNFIKL------GDPSPLITEAIPVIW-QPVVGDEHRQIRTAVELVFKD 1031 FS+ IK D SP + +I V +P+V D + +TA+EL+ KD Sbjct: 586 VEHFSDMIKFVKSRANEDSSPNLERSITVAEVEPLVKDFGSRWKTAIELMHKD 638 >At5g64030.1 68418.m08039 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase Length = 829 Score = 29.9 bits (64), Expect = 9.4 Identities = 14/54 (25%), Positives = 23/54 (42%) Query: 93 PTTGLTDRTESEAPSMEQNNLIETTHGLVRGFEWHTTGDIISYIDIPYAKYTKY 146 P+T + E P L+ G R EW + + I Y ++P+ K +Y Sbjct: 323 PSTKHYEHRERHCPDSPPTCLVPLPDGYKRPIEWPKSREKIWYTNVPHTKLAEY 376 >At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 452 Score = 29.9 bits (64), Expect = 9.4 Identities = 17/81 (20%), Positives = 30/81 (37%) Query: 28 QQQSPELITDSTSSPRPDDGAISTPSGNMGSXXXXXXXXXXXXXIKPSVTDENVSITTLR 87 ++Q+PE++T P P + T S + S P + E T+L Sbjct: 203 KKQNPEILTRKNPVPNPVPAPVDTESAKIKSSSTLTIKQSESPKTPPEIVQEAPKPTSLN 262 Query: 88 IETEAPTTGLTDRTESEAPSM 108 + T + S +PS+ Sbjct: 263 VVTSNGVFAGLFESSSASPSI 283 >At3g09180.1 68416.m01090 expressed protein Length = 402 Score = 29.9 bits (64), Expect = 9.4 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%) Query: 284 GEGTSGALIGFLALSSSSRNYFDKAITESGSVLSYWALDRNPALTGEKLTEALTKIDNSL 343 G GT AL L S + F K T+ G +L A+D+ AL L A ++ +L Sbjct: 329 GFGTGTALYSLLLWICSFESVFSKPCTKCGRLL---AMDKKSALILPPLHRAYQELPLAL 385 Query: 344 NLETAD 349 NL+ + Sbjct: 386 NLDVCE 391 >At2g25320.1 68415.m03029 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain Length = 1663 Score = 29.9 bits (64), Expect = 9.4 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 75 SVTDENVSITTLRIETEAPTTGLTDRTESEAP--SMEQNNLIETTHGLVRGFEW 126 S+T E SIT E+EA T L ++EA S E+ +L+E + EW Sbjct: 1369 SMTKEKSSITQKLSESEAANTRLKSEMKAEADRFSREKKDLVEQFRDVESQLEW 1422 Database: arabidopsis Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.136 0.403 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 25,503,323 Number of Sequences: 28952 Number of extensions: 1136358 Number of successful extensions: 2551 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 2535 Number of HSP's gapped (non-prelim): 25 length of query: 1064 length of database: 12,070,560 effective HSP length: 89 effective length of query: 975 effective length of database: 9,493,832 effective search space: 9256486200 effective search space used: 9256486200 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits) S2: 64 (29.9 bits)
- SilkBase 1999-2023 -