GeneModel BLAST Result against spombe

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000776-TA|BGIBMGA000776-PA|IPR002018|Carboxylesterase,
type B
         (572 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce...    59   1e-09
SPAC8F11.08c |||esterase/lipase|Schizosaccharomyces pombe|chr 1|...    31   0.43 
SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr 1|...    30   0.76 
SPAC18G6.15 |mal3||EB1 family Mal3|Schizosaccharomyces pombe|chr...    29   2.3  
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|...    29   2.3  
SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated prote...    28   4.0  
SPBC342.02 |||glutaminyl-tRNA synthetase |Schizosaccharomyces po...    28   4.0  
SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomy...    27   7.1  
SPAC3C7.09 |set8||lysine methyltransferase Set8 |Schizosaccharom...    27   9.3  

>SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 520

 Score = 59.3 bits (137), Expect = 1e-09
 Identities = 62/235 (26%), Positives = 99/235 (42%), Gaps = 28/235 (11%)

Query: 33  GPVCGKVEIAENST-KYYSFQGIPYGKPPTGARRFAELEPVEPWTDLLYAYEEGPA-CPS 90
           G + G   + EN   K + F GI Y KPP G  R+     +E   D    Y +    CP 
Sbjct: 2   GVLHGLTVLDENGKEKCHRFTGIRYAKPPVGKLRWRRPVTLEDGYDYSGDYNQFKTICPQ 61

Query: 91  RDIIYGSITIKAKG----VSEDCIYANVFVPATAQLNTDELSEVSLLPILVNIHGGAFNA 146
               Y +   + +       EDC++ N++VPA  +            P+L  IHGG    
Sbjct: 62  P--FYNNRKNQVRNPDFKYDEDCLFLNIWVPAGEK-------PAEGWPVLYFIHGGWLQV 112

Query: 147 GSGNRDLH-GPELLMVKD----VIVINFNYRLAVFGFLS----LASDKIPGNNGLRDMVT 197
           G+        P+ L         I+++  +RL +FGFL+    L  D    N G  D   
Sbjct: 113 GNPLHYRQCDPQDLQADGSPAKFILVSPGHRLNLFGFLAGKELLEEDPKSSNFGFWDQRL 172

Query: 198 LLRWVQRNARVFGGDPDKVTVLGESAGAASVNLLMMSDA----AKGLFNKAIIMS 248
            L W  ++   FGG+ + + V G SAG+ S    ++ +     A  +  +A+++S
Sbjct: 173 GLEWTYKHIESFGGNKENIAVGGISAGSYSALFQLIYETYHPEANQIIKRALLLS 227


>SPAC8F11.08c |||esterase/lipase|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 376

 Score = 31.1 bits (67), Expect = 0.43
 Identities = 12/42 (28%), Positives = 23/42 (54%)

Query: 185 KIPGNNGLRDMVTLLRWVQRNARVFGGDPDKVTVLGESAGAA 226
           K P ++ +  +   + W+  NA  +  DP+++  LGE  GA+
Sbjct: 230 KFPLSDAVEFVSLCVDWIVENAIYYDADPERIFFLGEDTGAS 271


>SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 341

 Score = 30.3 bits (65), Expect = 0.76
 Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 10/105 (9%)

Query: 134 PILVNIHGGAFNAGSGNRD-LHGPELLMVKDVIVINFNYRLAVFGFLSLASDKIPGNNGL 192
           P  +  HGG +  G+ N +      +      +V+N +YRLA         D  P    +
Sbjct: 101 PCFLWFHGGGWVLGNINTENSFATHMCEQAKCVVVNVDYRLA-------PEDPFPAC--I 151

Query: 193 RDMVTLLRWVQRNARVFGGDPDKVTVLGESAGAASVNLLMMSDAA 237
            D    L +   NA   G +P+K+ V G SAG     +L    AA
Sbjct: 152 DDGWEALLYCYENADTLGINPNKIAVGGSSAGGNIAAVLSHKVAA 196


>SPAC18G6.15 |mal3||EB1 family Mal3|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 308

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 3/71 (4%)

Query: 192 LRDMVTLLRWVQRNARVF--GGDPDKVTVLGESAGAASVNLLMMSDAAKGLFNKAIIMSG 249
           ++D +  ++W +R    +  GGD D +   G + G A+  ++  S  A G   +  + SG
Sbjct: 88  MQDNLEFVQWAKRFWDQYYPGGDYDALARRG-NRGPANTRVMNSSAGATGPSRRRQVSSG 146

Query: 250 TAFPSFYSTSA 260
           ++ PS   +SA
Sbjct: 147 SSTPSMTKSSA 157


>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 732

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 3/36 (8%)

Query: 121 QLNTDELSEVSLLPILVNIHG-GAFNAGSGNRDLHG 155
           Q+NTD+L  VS L ++VN+ G  AFN G  N D HG
Sbjct: 447 QMNTDQLLLVSFLGLVVNLVGILAFNHGH-NHD-HG 480


>SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated protein
            Mug36|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1646

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 276  VNSTDPDEIHQILIELPLEDIMKANDVVQYN 306
            + ST+ +EI    + LP+ED  K+   V YN
Sbjct: 1005 LGSTEDEEISDCYLALPIEDYAKSLTEVDYN 1035


>SPBC342.02 |||glutaminyl-tRNA synthetase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 811

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 3/44 (6%)

Query: 503 LFSNYVKCNNPTCTESDD--PQWPPINQTELMYQLIKEPNVYSL 544
           LF+N  KC+NP   +  +   Q  P ++  L   +I EP +Y L
Sbjct: 706 LFNNLFKCDNPAALKEQELAAQLNPESEVVLKNSII-EPGIYDL 748


>SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 541

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 432 RTLLNSAPTFLYVFSYQGDISIIKRSNWLSYNGTGHVE 469
           R +LNS P+++          I+K +NW+  +G  H+E
Sbjct: 105 RKILNS-PSYVQPCVVDAGKKILKHTNWVFLDGRDHIE 141


>SPAC3C7.09 |set8||lysine methyltransferase Set8
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 429

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 11/36 (30%), Positives = 20/36 (55%)

Query: 287 ILIELPLEDIMKANDVVQYNSGIASFVPVVEIEGHN 322
           +L+E+PLE+I+    V Q+ +    F  +  +E  N
Sbjct: 42  VLLEVPLENIICRKTVEQFRNSCDKFASIATLEEWN 77


  Database: spombe
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.320    0.137    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,603,017
Number of Sequences: 5004
Number of extensions: 113129
Number of successful extensions: 251
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 245
Number of HSP's gapped (non-prelim): 9
length of query: 572
length of database: 2,362,478
effective HSP length: 76
effective length of query: 496
effective length of database: 1,982,174
effective search space: 983158304
effective search space used: 983158304
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 56 (26.6 bits)