Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000773-TA|BGIBMGA000773-PA|IPR002018|Carboxylesterase,
type B
(503 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1338 - 29440373-29440534,29440993-29441083,29441799-294419... 39 0.008
01_06_0036 + 25786530-25786756,25788000-25788076,25788538-257886... 35 0.17
08_01_0317 - 2807275-2807487,2807573-2807737,2807818-2807987,280... 33 0.40
04_01_0098 - 1008936-1011185,1011383-1012271,1012336-1013420 33 0.40
02_04_0288 + 21607289-21608251 33 0.40
09_04_0414 - 17393780-17394826 33 0.53
09_04_0412 + 17369935-17370873 33 0.53
11_04_0443 - 17808897-17809110,17809169-17813652 32 1.2
09_04_0078 + 14379720-14379786,14379903-14379974,14381093-143814... 31 2.8
06_03_1457 - 30287185-30287287,30287691-30287759,30288212-302883... 31 2.8
08_02_0995 - 23401390-23402379 30 4.9
04_04_1433 + 33564153-33564435,33564501-33564728,33564834-335654... 29 8.6
>06_03_1338 -
29440373-29440534,29440993-29441083,29441799-29441942,
29442094-29442159,29442589-29442729,29443077-29443178,
29443264-29443338,29443469-29443549,29443670-29443739,
29444063-29444139,29444392-29444660
Length = 425
Score = 39.1 bits (87), Expect = 0.008
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 13/115 (11%)
Query: 83 QLDVNVPTSAAPTWPVLVWVTGSDGSYHSGQLVKKGVIVVIVRHRLGAPGFL--CYE-RD 139
+LD+ +PT PV+ +VTG G++ G KG ++ R RL G L C + R+
Sbjct: 139 RLDLYIPTDRTGLKPVVAFVTG--GAWIIGY---KGWGALLGR-RLAERGILVACIDYRN 192
Query: 140 IP-GNAG--AKDVIAALHWVRDNIIAFKGNPARVVVAGQGFGAAMVEALTLTPMA 191
P G G +D + +V +NI ++ G+P R+ + GQ G A + A TL A
Sbjct: 193 FPQGTIGDMVEDASQGIAFVCNNIASYGGDPERIYLVGQSAG-AHIAACTLLHQA 246
>01_06_0036 +
25786530-25786756,25788000-25788076,25788538-25788625,
25788706-25788786,25788866-25788940,25789048-25789149,
25789589-25789726,25791559-25791585,25791696-25791786,
25792423-25792584
Length = 355
Score = 34.7 bits (76), Expect = 0.17
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 16/105 (15%)
Query: 83 QLDVNVPTSAAPTWPVLVWVTGSD--------GSYHSGQLVKKGVIVVIVRHRLGAPGFL 134
+LD+ +P PV+ +VTG GS +L ++G+IV + +R G +
Sbjct: 131 RLDLYIPKDINRPCPVVAFVTGGAWIIGYKAWGSLLGRRLAERGIIVACIDYRNFPQGTI 190
Query: 135 CYERDIPGNAGAKDVIAALHWVRDNIIAFKGNPARVVVAGQGFGA 179
G+ D + +V +NI ++ G+P R+ + GQ GA
Sbjct: 191 -------GDM-VSDASQGISYVCNNIASYGGDPNRIYLVGQSAGA 227
>08_01_0317 -
2807275-2807487,2807573-2807737,2807818-2807987,
2808256-2808724,2810581-2810727,2810968-2810976,
2811054-2811890
Length = 669
Score = 33.5 bits (73), Expect = 0.40
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 8/115 (6%)
Query: 273 FLETPYDLFVTKKSKSVPMI-----IGYNSDEAYIFSSLLKEFKVINKLTKDISFLLPYE 327
F T D F K S P++ I D S+ LK F + N +DI L P +
Sbjct: 150 FKFTVNDCFAKKFSSGCPVLKDLVLISCGIDVTMFSSTTLKSFVIHN--AEDIEHL-PKQ 206
Query: 328 LQFLNSREMNQVSRQIEDIYFRRNRTMTALLAYHRDVYFLSHVYRSASYHAAVSS 382
+++L N V+ IE+I R + +YF H +R+++ + S
Sbjct: 207 IEYLVIEMPNLVTLHIEEIPRRNIHLVDLSSVKEATIYFFEHSFRNSAVDCNILS 261
>04_01_0098 - 1008936-1011185,1011383-1012271,1012336-1013420
Length = 1407
Score = 33.5 bits (73), Expect = 0.40
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 317 TKDISFLLPYELQFLNSREMN-QVSRQI-EDIYFRRNRTMTALLAYHRDVYFLSHVYRSA 374
TKD +F+L Y L LN+ N QV +++ ED + R NR + A R+ +LS ++ S
Sbjct: 636 TKDAAFILCYSLIMLNTDLHNPQVKKKMSEDDFIRNNRAINAGKDLPRE--YLSELFHSI 693
Query: 375 SYHA 378
S +A
Sbjct: 694 SGNA 697
>02_04_0288 + 21607289-21608251
Length = 320
Score = 33.5 bits (73), Expect = 0.40
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 12/108 (11%)
Query: 89 PTSAAPTWPVLVWVTGSDGSYHSGQLVKKGVIVVIVRHRLGAPGFLCYERDI------PG 142
P +AA PV+V+V G G + + + + R P LC D P
Sbjct: 67 PAAAAERLPVVVYVHG--GGFVAESAASPSYHLFLNRLAAACPA-LCVSVDYRLAPEHPL 123
Query: 143 NAGAKDVIAALHWV---RDNIIAFKGNPARVVVAGQGFGAAMVEALTL 187
AG D +AAL WV D +A +G+ RV +AG G + L +
Sbjct: 124 PAGYDDCLAALRWVLSAADPWVAARGDLDRVFLAGDSAGGNICHHLAM 171
>09_04_0414 - 17393780-17394826
Length = 348
Score = 33.1 bits (72), Expect = 0.53
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 15/109 (13%)
Query: 108 SYHSGQLVKKGVIVVIVRHRLGAPGFLCYERDIPGNAGAKDVIAALHWV-------RDNI 160
+Y + K GV+ V V +RL AP E +P A D AAL WV D
Sbjct: 125 AYLNTLAAKAGVLAVSVNYRL-AP-----EHPLP--AAYDDSWAALKWVLANAAPGTDQW 176
Query: 161 IAFKGNPARVVVAGQGFGAAMVEALTLTPMAEGLFHGVILQSGSILAPW 209
++ G+ +R+ +AG G + L L EGL G ++ ++L P+
Sbjct: 177 VSQYGDLSRLFLAGDSAGGNIAHNLALRAGEEGLDGGARIKGVALLDPY 225
>09_04_0412 + 17369935-17370873
Length = 312
Score = 33.1 bits (72), Expect = 0.53
Identities = 31/84 (36%), Positives = 40/84 (47%), Gaps = 12/84 (14%)
Query: 108 SYHSGQLVKKGVIVVIVRHRLGAPGFLCYERDIPGNAGAKDVIAALHWV----RDNIIAF 163
+Y + GV+VV V +RL AP E +P AG D AAL W D+ I
Sbjct: 96 NYLNSAAAAAGVLVVSVDYRL-AP-----ENPLP--AGYDDSWAALQWAVSAHADDWITE 147
Query: 164 KGNPARVVVAGQGFGAAMVEALTL 187
G+ ARV VAG G +V + L
Sbjct: 148 HGDTARVFVAGDSAGGNIVHDVLL 171
>11_04_0443 - 17808897-17809110,17809169-17813652
Length = 1565
Score = 31.9 bits (69), Expect = 1.2
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 7/117 (5%)
Query: 262 LEEPLKNEERFFLETPYDLFVTKKSKSVPMIIGYNSDEAYIFSSLLKEFKVINKL----- 316
L E L E +FL T +D F + KS+P++ + A F S+ K + +L
Sbjct: 401 LPEELYIEFLYFLATNWDSFSSTSMKSIPLLKYVDRYGAPTFWSIYKASQSSGRLCISSH 460
Query: 317 TKDISFLLPYELQFLNSRE-MNQVSRQIEDIYFRRNRTMTALLAYHRDVYFLS-HVY 371
K I +L+ + +F + + +S Q F +N +T L +H +V +S H Y
Sbjct: 461 KKYIQWLISWNQEFPSCNQFFMPLSTQTALYDFSKNTFVTNWLRWHVNVQVVSVHGY 517
>09_04_0078 +
14379720-14379786,14379903-14379974,14381093-14381497,
14382835-14382911,14383016-14383135,14383227-14383997,
14384933-14385146,14385269-14385735
Length = 730
Score = 30.7 bits (66), Expect = 2.8
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 381 SSLVYFYTFSHLGEVGVQKEPGIQKSGAAHSDELAYLFSGRNLDKEDGLVQDLLVRFWVN 440
+ +V F L G+Q PG+ HSD L + ++ DGL L +
Sbjct: 276 NKMVQIRRFRTLNSTGIQLSPGVNDREILHSDNLQDI----GVECIDGLASVLNEEHFEM 331
Query: 441 FVIHLNPTHRQP 452
F N T+RQP
Sbjct: 332 FQAIANNTNRQP 343
>06_03_1457 - 30287185-30287287,30287691-30287759,30288212-30288351,
30288447-30288641,30288743-30289363,30289688-30290257,
30290332-30293638,30293764-30293863,30293978-30295014,
30295256-30295604,30296299-30296374,30296456-30297022,
30297094-30297238,30298281-30298405,30298491-30298582,
30298646-30298828,30298946-30299058,30299499-30299649,
30299720-30299882
Length = 2701
Score = 30.7 bits (66), Expect = 2.8
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 231 DYVDVFLNATMEELFIKSSESNTPYFSFGLC-LEEPLKNEERFFLETPYDLFVTKKSKSV 289
D +D +L + L +SSE+N F GL + + +++F + + +K++ V
Sbjct: 1745 DLMDEYLAEADKGLVCRSSENNAS-FDMGLAKIFNAMMKKDQFMVAEK--IAQSKQALLV 1801
Query: 290 PMIIG----YNSDEAYIFS-SLLKEFKVINKLTKDISFL-LPY---ELQFLN-SREMNQV 339
P+ Y YI +L+E + N L D SFL P+ + +FL +++
Sbjct: 1802 PLAAAGMDSYMRAYPYIVKLHMLRELEDFNSLLGDESFLEKPFAADDPKFLKLTKDWENR 1861
Query: 340 SRQIEDIYFRRNRTMTALLAYHRDVYFLSHVYRSAS----YHAAVSSLVYFYTFSHLGEV 395
R + + R LLA+ R VY LSH+ A +A + L Y +H +
Sbjct: 1862 LRCTQPSLWARE----PLLAFRRMVYNLSHMNAQAGNCWLQYARLCRLAGHYETAHRAIL 1917
Query: 396 GVQKEPGIQKSGAAHSDELAYLFSGRNLDKEDGLVQDL 433
E + AH ++ YL+ N+ K D + +L
Sbjct: 1918 ----EADASGAPNAHMEKAKYLW---NIRKSDSAIAEL 1948
Score = 29.5 bits (63), Expect = 6.5
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 374 ASYHAAVSSLVYFYTFSHLGEVGVQKEPGIQKSGAAHSDELAYLFS-GRNLDKEDGLV 430
AS+ + Y SH+ E P SGA D++++L LD+ DGL+
Sbjct: 1594 ASFRCQAHARALMYFESHVREKSGSSNPAADCSGAFSDDDISFLMEIYGGLDEPDGLL 1651
>08_02_0995 - 23401390-23402379
Length = 329
Score = 29.9 bits (64), Expect = 4.9
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 17/101 (16%)
Query: 118 GVIVVIVRHRLGAPGFLCYERDIPGNAGAKDVIAALHWVRDNI---------IAFKGNPA 168
GV+ V V +RL AP E +P A D AAL W + +A G+ A
Sbjct: 105 GVVAVSVDYRL-AP-----EHPLP--AAYDDAWAALRWTVASCSASGGPEPWLAEHGDAA 156
Query: 169 RVVVAGQGFGAAMVEALTLTPMAEGLFHGVILQSGSILAPW 209
R+ VAG GA + +T+ +GL G ++ +L P+
Sbjct: 157 RIFVAGDSAGANIAHNVTMRAGKDGLPGGARIEGMVLLHPF 197
>04_04_1433 +
33564153-33564435,33564501-33564728,33564834-33565453,
33566938-33567195
Length = 462
Score = 29.1 bits (62), Expect = 8.6
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Query: 86 VNVPTSAAPTWPVLVWVTGSDGSYHSGQLVKKGVIVVIVRHRLGAPGFLCYERDIPGNAG 145
V V P V W D S++ ++ + G H LGA + + + + G
Sbjct: 193 VVVAFRGTPALDVARWCADVDPSWY--KIPRLGRAHAAYTHALGAQRNIGWPKWVEHVKG 250
Query: 146 AKDVIAALHWVRDNI--IAFKGNPARVVVAGQGFGAAM 181
+ A + +RD + + ARV+VAG G G A+
Sbjct: 251 KPQRVHAYYAIRDAVKRLLEANGRARVLVAGHGSGGAL 288
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.322 0.139 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,553,400
Number of Sequences: 37544
Number of extensions: 633168
Number of successful extensions: 1286
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1284
Number of HSP's gapped (non-prelim): 13
length of query: 503
length of database: 14,793,348
effective HSP length: 85
effective length of query: 418
effective length of database: 11,602,108
effective search space: 4849681144
effective search space used: 4849681144
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
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