Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000773-TA|BGIBMGA000773-PA|IPR002018|Carboxylesterase,
type B
(503 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g02410.1 68416.m00228 hypothetical protein weak similarity to... 36 0.063
At5g15860.2 68418.m01856 expressed protein 34 0.19
At5g15860.1 68418.m01855 expressed protein 34 0.19
At5g39500.1 68418.m04783 pattern formation protein, putative sim... 33 0.33
At1g26120.1 68414.m03188 esterase-related contains similaity to ... 33 0.58
At3g24430.1 68416.m03066 expressed protein contains Pfam profile... 32 1.0
At5g13230.1 68418.m01520 pentatricopeptide (PPR) repeat-containi... 30 3.1
At3g46980.1 68416.m05101 transporter-related low similarity to b... 30 4.1
At4g39480.1 68417.m05585 cytochrome P450 family protein contains... 29 7.2
At4g22680.1 68417.m03273 myb family transcription factor (MYB85)... 29 9.5
>At3g02410.1 68416.m00228 hypothetical protein weak similarity to
kynurenine formamidase [Mus musculus] GI:21552719
Length = 422
Score = 35.9 bits (79), Expect = 0.063
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 83 QLDVNVPTSAAPTWPVLVWVTGSD--------GSYHSGQLVKKGVIVVIVRHRLGAPGFL 134
+LD+ +P ++ PV+V+VTG GS QL ++ +IV + +R G +
Sbjct: 137 RLDLYIPPTSDGLKPVVVFVTGGAWIIGYKAWGSLLGLQLAERDIIVACLDYRNFPQGTI 196
Query: 135 CYERDIPGNAGAKDVIAALHWVRDNIIAFKGNPARVVVAGQGFGA 179
D+ D + +V +NI AF G+P R+ + GQ GA
Sbjct: 197 S---DM-----VSDAAQGISFVCNNISAFGGDPNRIYLMGQSAGA 233
>At5g15860.2 68418.m01856 expressed protein
Length = 299
Score = 34.3 bits (75), Expect = 0.19
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 83 QLDVNVPTSAAPTWPVLVWVTGSD--------GSYHSGQLVKKGVIVVIVRHRLGAPGFL 134
+LD+ +P++ PV+V+VTG GS QL ++ +IV + +R G +
Sbjct: 142 RLDLYLPSNNDGLKPVVVFVTGGAWIIGYKAWGSLLGMQLAERDIIVACLDYRNFPQGTI 201
Query: 135 CYERDIPGNAGAKDVIAALHWVRDNIIAFKGNPARVVVAGQGFGA 179
D+ D + +V +NI AF G+P R+ + GQ GA
Sbjct: 202 S---DM-----VTDASQGISFVCNNISAFGGDPNRIYLMGQSAGA 238
>At5g15860.1 68418.m01855 expressed protein
Length = 427
Score = 34.3 bits (75), Expect = 0.19
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 83 QLDVNVPTSAAPTWPVLVWVTGSD--------GSYHSGQLVKKGVIVVIVRHRLGAPGFL 134
+LD+ +P++ PV+V+VTG GS QL ++ +IV + +R G +
Sbjct: 142 RLDLYLPSNNDGLKPVVVFVTGGAWIIGYKAWGSLLGMQLAERDIIVACLDYRNFPQGTI 201
Query: 135 CYERDIPGNAGAKDVIAALHWVRDNIIAFKGNPARVVVAGQGFGA 179
D+ D + +V +NI AF G+P R+ + GQ GA
Sbjct: 202 S---DM-----VTDASQGISFVCNNISAFGGDPNRIYLMGQSAGA 238
>At5g39500.1 68418.m04783 pattern formation protein, putative
similar to SP|Q42510 Pattern formation protein EMB30
{Arabidopsis thaliana}; contains Pfam profile PF01369:
Sec7 domain
Length = 1443
Score = 33.5 bits (73), Expect = 0.33
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 316 LTKDISFLLPYELQFLNSREMN-QV-SRQIEDIYFRRNRTMTALLAYHRDVYFLSHVYRS 373
+ KD +F+L Y + LN+ + N QV +R E+ + R NRT+ R+ +LS +Y S
Sbjct: 682 IDKDAAFVLAYSIILLNTDQHNAQVKTRMTEEDFIRNNRTINGGADLPRE--YLSEIYHS 739
>At1g26120.1 68414.m03188 esterase-related contains similaity to
esterase 6 GI:606998 from [Drosophila simulans] and
esterase GI:12584120 from [Sphingomonas elodea]
Length = 476
Score = 32.7 bits (71), Expect = 0.58
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 83 QLDVNVPTSAAPTWPVLVWVTGSD--------GSYHSGQLVKKGVIVVIVRHRLGAPGFL 134
+LD+ +P ++ PV+ +VTG GS QL ++ +IV + +R G +
Sbjct: 193 RLDLYLPKNSTGPKPVVAFVTGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGSI 252
Query: 135 CYERDIPGNAGAKDVIAALHWVRDNIIAFKGNPARVVVAGQGFGA 179
D+ KD + + +V ++I + G+P R+ + GQ GA
Sbjct: 253 S---DM-----VKDASSGISFVCNHIAEYGGDPDRIYLMGQSAGA 289
>At3g24430.1 68416.m03066 expressed protein contains Pfam profile
PF01883: Domain of unknown function
Length = 532
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 135 CYERDIPGNAGAKDVIAALHWVRDNIIAFKGNPARVVVAGQ-GFGAAMVEALTLTPMAEG 193
C +D+ N A +V+AAL WV+ + PA+ + AGQ FG + + + +G
Sbjct: 128 CPVKDMFENK-ANEVVAALPWVKKVNVTMSAQPAKPIFAGQLPFGLSRISNIIAVSSCKG 186
>At5g13230.1 68418.m01520 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 822
Score = 30.3 bits (65), Expect = 3.1
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 12/120 (10%)
Query: 324 LPYELQFLNSREMNQVSRQIEDIYFRRNRTMTALLAYHRD--VYFL-SHVYRSASYHAAV 380
+PYE + R M S + F R L +D Y L S++Y A A V
Sbjct: 612 IPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANV 671
Query: 381 SSLVYFYTFSHLGEVGVQKEPGIQKSGAAHSDELAYLFSGRNLDKEDGLVQDLLVRFWVN 440
+S+ + E+GV+KEPG+ S H ++ Y G + + L+ +L W+N
Sbjct: 672 ASIR-----KSMKEMGVKKEPGL--SWIEHQGDVHYFSVGLSDHPDMKLINGMLE--WLN 722
>At3g46980.1 68416.m05101 transporter-related low similarity to
brain specific Na+-dependent inorganic phosphate
cotransporter from [Rattus norvegicus] GI:507415, [Homo
sapiens] GI:7328925, vesicular glutamate transporter 3
from [Rattus norvegicus] GI:21685382; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 533
Score = 29.9 bits (64), Expect = 4.1
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 91 SAAPTWPVLVWVTGSDGSYHSGQLVKKGVIVVIVRHRLGAPGFLCYERDIPGNAGAKDVI 150
SA P W ++ + TG + S L+++G + + R + + GF+ + G AK +
Sbjct: 379 SAVP-WSMMAF-TGYIAGFWSDLLIRRGTSITLTRKIMQSIGFIGPGIALIGLTTAKQPL 436
Query: 151 AALHWVRDNIIAFKGNPARVVVAGQGFGAAMVEALTLTPMAEGLFHGVILQSGSILA 207
A W+ + K + GF ++ + P G+ HG+ L +G++ A
Sbjct: 437 VASAWL-SLAVGLKS------FSHLGF---LINLQEIAPEYSGVLHGMCLTAGTLAA 483
>At4g39480.1 68417.m05585 cytochrome P450 family protein contains
Pfam profile: PF00067 cytochrome P450
Length = 989
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Query: 297 SDEAYIFSSLLKEFKVINKLTKDISFLLPYELQFLNSREMNQVSRQIEDIYFRRNRTMTA 356
SD+ ++ ++L F + + T + + L N M ++ ++I F RN+T
Sbjct: 293 SDDRFLRDTILS-FMLAGRDTTGSALTWFFWLLCNNQEAMTKIRQEINTNLFPRNKTDDG 351
Query: 357 LLAYHRDVYFLSHVYRSASYHAAVSSLVYFY 387
++Y D + V + H AV + Y
Sbjct: 352 SVSYDSDSFNPQEVKKLVYLHGAVCEALRLY 382
>At4g22680.1 68417.m03273 myb family transcription factor (MYB85)
similar to myb DNA-binding protein GI:1020155 from
[Arabidopsis thaliana]
Length = 266
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 445 LNPTHRQPLDWDPMNYENPRLL-----DIGVEPKMIDYPYEKTS 483
++P QPL+ +P N +N + + D+ VEPK + Y + S
Sbjct: 121 IDPMTHQPLNQEPSNIDNSKTIPSNPDDVSVEPKTTNTKYVEIS 164
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.322 0.139 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,028,525
Number of Sequences: 28952
Number of extensions: 528444
Number of successful extensions: 1070
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1062
Number of HSP's gapped (non-prelim): 10
length of query: 503
length of database: 12,070,560
effective HSP length: 84
effective length of query: 419
effective length of database: 9,638,592
effective search space: 4038570048
effective search space used: 4038570048
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)
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