GeneModel BLAST Result against spombe

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000772-TA|BGIBMGA000772-PA|IPR002018|Carboxylesterase,
type B
         (567 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce...    62   2e-10
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa...    29   1.3  
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb...    29   1.7  
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa...    29   1.7  
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch...    29   2.3  
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||...    27   5.3  
SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase Cdc...    27   9.3  

>SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 520

 Score = 62.5 bits (145), Expect = 2e-10
 Identities = 82/319 (25%), Positives = 123/319 (38%), Gaps = 29/319 (9%)

Query: 55  FRGVPYAKQPVGELRFKELQPAEPWTDYL-DATEEGPVCYQT--DVLYGSLMKP-HGMNE 110
           F G+ YAK PVG+LR++     E   DY  D  +   +C Q   +     +  P    +E
Sbjct: 21  FTGIRYAKPPVGKLRWRRPVTLEDGYDYSGDYNQFKTICPQPFYNNRKNQVRNPDFKYDE 80

Query: 111 ACIYANIHVPLYALPAAGETPTKPGLPILVFIHXX-XXXXXXXXXXLYGPEYLVT----R 165
            C++ NI VP      AGE P + G P+L FIH                P+ L       
Sbjct: 81  DCLFLNIWVP------AGEKPAE-GWPVLYFIHGGWLQVGNPLHYRQCDPQDLQADGSPA 133

Query: 166 NVVVITFNYRLNFFGFFS----LDTPKVPGNNGLRDMVTLLRWVKRNARAFGGNPDNVXX 221
             ++++  +RLN FGF +    L+      N G  D    L W  ++  +FGGN +N+  
Sbjct: 134 KFILVSPGHRLNLFGFLAGKELLEEDPKSSNFGFWDQRLGLEWTYKHIESFGGNKENIAV 193

Query: 222 XXXXXXXXXXXXXXXXKA----TEGLVSRAILMSGAGXXXXXXXXXXXXXXINKLLFSIL 277
                           +        ++ RA+L+S  G               N+L     
Sbjct: 194 GGISAGSYSALFQLIYETYHPEANQIIKRALLLSN-GLSVQPKSVEESQIQFNELAQKFG 252

Query: 278 GVNSTNPDEIHEKLVAMPVEKLNEANRILIDQIGLTTFFPVVETPHPGITTILDEDPNIL 337
                +  E  EKL A+P + L  A+ IL   + L TF  V +       T  D      
Sbjct: 253 IPLELSSAEKLEKLRAIPFQDL--ADNIL--NLRLHTFRAVTDGDFVNPNTFKDIYDGTF 308

Query: 338 VQQGRGKDIPLIIGFTNSE 356
            ++ R     LIIG  N+E
Sbjct: 309 GKRIRDSGRELIIGEVNNE 327


>SPAC3C7.06c |pit1||serine/threonine protein kinase
           Pit1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 650

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 20/69 (28%), Positives = 31/69 (44%)

Query: 419 CTDSYYKYPALNLAEKRSTAGDAPVFLYQFSYDGYSVFKQAFHLHFNGAGHADDLTYVLK 478
           C     ++   NL +  ST  + P+ L Q       +FK   H+H NG  H D     + 
Sbjct: 109 CLHIVMEFLDCNLYQLISTRKNDPLTLEQVQDIMRQIFKGLNHIHTNGFFHRDMKPENIL 168

Query: 479 VNSASGTSS 487
           ++S S +SS
Sbjct: 169 ISSNSDSSS 177


>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 2685

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 514  CDETTAWPPVTPRELQYQDIITP 536
            C+  T WPP  P E  +  ++TP
Sbjct: 2045 CEHNTVWPPWVPFETTFDFVLTP 2067


>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1076

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 80  TDYLDATEEGPVCYQTD-VLYGSLMKPHGMNEACIYANIHVPLYA 123
           TD  D +++  V   TD +LY   + PH      +Y + H P+YA
Sbjct: 800 TDIYDTSDKHRVPAWTDRILYRGELVPHSYQSVPLYYSDHRPIYA 844


>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 249

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 3/52 (5%)

Query: 516 ETTAWPPVTPRELQYQDIITPNLCHQTSLTKEQLEMKNFFDKIHNGGESRLK 567
           +T+   P +P +L+ +   +  +CH  S  ++ L + N    IHNG  S L+
Sbjct: 6   DTSGSVPGSPIDLEPE---SETICHWQSCEQDLLTLDNLVHHIHNGTTSNLR 54


>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 751

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 295 PVEKLNEANRILIDQIGLTTFFPVVETPH-PGITTILDEDPNILVQQGRGKDI 346
           P E+ N++ +  +     +T   V +T   P +T   D+DP+ LVQ    K+I
Sbjct: 148 PTERDNKSMKSFVRSFFTSTDSSVADTTIIPSMTQQFDKDPSTLVQSSIDKEI 200


>SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase
           Cdc25|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 596

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 6/73 (8%)

Query: 417 NMCTDSYYKYPALNLAEKRSTAGDAPVFLYQFSYDGYSVFKQAFHLHFNGAGHADDLTYV 476
           ++ + S+  Y   N++  RS+ G+AP FL   S   YS+ K+      +G      LTY 
Sbjct: 173 SLSSSSFDSYLRPNVSRSRSS-GNAPPFLRSRSSSSYSINKKK---GTSGGQATRHLTYA 228

Query: 477 LK--VNSASGTSS 487
           L    + +S T+S
Sbjct: 229 LSRTCSQSSNTTS 241


  Database: spombe
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.320    0.137    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,460,810
Number of Sequences: 5004
Number of extensions: 103328
Number of successful extensions: 209
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 203
Number of HSP's gapped (non-prelim): 9
length of query: 567
length of database: 2,362,478
effective HSP length: 76
effective length of query: 491
effective length of database: 1,982,174
effective search space: 973247434
effective search space used: 973247434
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 56 (26.6 bits)