Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000771-TA|BGIBMGA000771-PA|undefined
         (226 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    32   0.003
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.64 
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    24   1.1  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   5.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   5.9  
AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    21   7.9  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.9  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.9  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 32.3 bits (70), Expect = 0.003
 Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 9/78 (11%)

Query: 155 TVGFYMEIGTAQFGAWA---------AFATWVGLAVFSTLKVCRYHQLQNIQVSMYRERQ 205
           T+  Y  +G  ++  WA         A+ TW  ++VF    V       +I + +++  +
Sbjct: 176 TIFTYTSVGEDEYDCWATFQEPWGKRAYVTWYSISVFMVPLVVLIFTYTSICIEIWQSSE 235

Query: 206 RLVNENDSQPSSDGRSTP 223
             +    SQ S+ G+ TP
Sbjct: 236 SSLRPRSSQKSAPGKRTP 253


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.64
 Identities = 8/22 (36%), Positives = 13/22 (59%)

Query: 62  FYCNYVILVGILMFLVCCVQIY 83
           FYC ++I    L+FL+C    +
Sbjct: 149 FYCAFIIFTVHLLFLLCIYHFF 170



 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)

Query: 62  FYCNYVILVGILMFLVCCVQIY 83
           F C ++I    L+FL+C    Y
Sbjct: 268 FCCAFIIFTMHLLFLLCIYYFY 289



 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 62  FYCNYVILVGILMFLVCCVQIYRLSML 88
           FY  +++    L+ LVC    Y + +L
Sbjct: 241 FYYAFILFTVHLLLLVCIYYFYYMHLL 267


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 173 FATWVGLAVFSTLKVCRYHQLQNIQVS 199
           F+T+ G+ V   +K C + Q  N+Q S
Sbjct: 102 FSTFAGIEVLHVVKQCYHLQKINVQQS 128


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/21 (38%), Positives = 15/21 (71%)

Query: 203 ERQRLVNENDSQPSSDGRSTP 223
           +R++LV+E+   P+S   +TP
Sbjct: 209 KRKQLVSEHPDSPNSKKSATP 229


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 6/15 (40%), Positives = 12/15 (80%)

Query: 63  YCNYVILVGILMFLV 77
           YCN++IL  + +F++
Sbjct: 321 YCNFIILFYLSVFVI 335


>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)

Query: 203 ERQRLVNENDSQPSSD 218
           E QRL++E ++QP  D
Sbjct: 35  EAQRLLSEQNNQPVHD 50


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)

Query: 203 ERQRLVNENDSQPSSD 218
           E QRL++E ++QP  D
Sbjct: 35  EAQRLLSEQNNQPVHD 50


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)

Query: 203 ERQRLVNENDSQPSSD 218
           E QRL++E ++QP  D
Sbjct: 35  EAQRLLSEQNNQPVHD 50


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.326    0.138    0.433 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,575
Number of Sequences: 317
Number of extensions: 2077
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 10
length of query: 226
length of database: 114,650
effective HSP length: 55
effective length of query: 171
effective length of database: 97,215
effective search space: 16623765
effective search space used: 16623765
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 42 (21.0 bits)