Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000771-TA|BGIBMGA000771-PA|undefined
         (226 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK124477-1|BAC85860.1|  197|Homo sapiens protein ( Homo sapiens ...    98   3e-20
BC051355-1|AAH51355.1|  219|Homo sapiens similar to RIKEN cDNA 1...    32   1.9  
AK128779-1|BAC87608.1|  172|Homo sapiens protein ( Homo sapiens ...    31   4.4  
BC062563-1|AAH62563.1|  449|Homo sapiens MFSD11 protein protein.       30   7.6  
BC002753-1|AAH02753.1|  449|Homo sapiens major facilitator super...    30   7.6  
AK000233-1|BAA91025.1|  449|Homo sapiens protein ( Homo sapiens ...    30   7.6  
AF015186-1|AAB92497.1|  449|Homo sapiens ET putative translation...    30   7.6  
AF015185-1|AAB92496.1|  397|Homo sapiens ET putative translation...    30   7.6  
AF015184-1|AAB92495.1|  449|Homo sapiens ET putative translation...    30   7.6  

>AK124477-1|BAC85860.1|  197|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42486 fis, clone BRACE2032385. ).
          Length = 197

 Score = 97.9 bits (233), Expect = 3e-20
 Identities = 61/179 (34%), Positives = 90/179 (50%), Gaps = 14/179 (7%)

Query: 1   MALTNVLLLSQIAGYLMGLILSLCVIVPMSMHQDEFSGNCLLFSKGVW-------QEDGQ 53
           MAL N  L +Q A Y +  + S  V+VP+S +  +F G CLLF++G+W       QE  +
Sbjct: 1   MALNN-FLFAQCACYFLAFLFSFVVVVPLSENGHDFRGRCLLFTEGMWLSANLTVQERER 59

Query: 54  LLVS-WASRFYCNYVILVGILMFLVCCVQIYRLSMLVYKGEDSSFLSAFLEAVGCTVLCG 112
             V  W     C + +L  +L  L+     +R    + KG + SF SAFL  +    +  
Sbjct: 60  FTVQEWGPPAACRFSLLASLLSLLLAAAHAWRTLFFLCKGHEGSFFSAFLNLLVSAFVVF 119

Query: 113 LGVSAALMVTLGFMTWCDNIIER--FP-SCEDATGQDIDTKDKISTVGFYMEIGTAQFG 168
           L   A+ +V++GF  WCD I E+   P SCE+   QDID +  +    FY +   AQ G
Sbjct: 120 LVFIASTIVSVGFTMWCDTITEKGTVPHSCEEL--QDIDLELGVDNSAFYDQFAIAQVG 176


>BC051355-1|AAH51355.1|  219|Homo sapiens similar to RIKEN cDNA
           1810059G22 protein.
          Length = 219

 Score = 31.9 bits (69), Expect = 1.9
 Identities = 31/178 (17%), Positives = 64/178 (35%), Gaps = 3/178 (1%)

Query: 11  QIAGYLMGLILSLCVIVPMSMHQDEFSGNCLLFSKGVWQEDGQLLVSWASRFYCNYVILV 70
           ++A +    +        M+  Q  FSG C L+           L   ++   C +V   
Sbjct: 10  ELALFAAAFLCGAVAAAAMTRTQGSFSGRCPLYGVATLNGSSLALSRPSAPSLCYFVAGA 69

Query: 71  GILMFLVCCVQI--YRLSMLVYKGEDSSFLSAFLEAVGCTVLCGLGVSAALMVTLGFMTW 128
             L+ L C + +  +  S  +      +       A+    +  + VSA ++   G  + 
Sbjct: 70  SGLLALYCLLLLLFWIYSSCIEDSHRGAIGLRIALAISAIAVFLVLVSACIL-RFGTRSL 128

Query: 129 CDNIIERFPSCEDATGQDIDTKDKISTVGFYMEIGTAQFGAWAAFATWVGLAVFSTLK 186
           C++II    +   +  Q I      + + FY  +  A+  +W     W  + V   ++
Sbjct: 129 CNSIISLNTTISCSEAQKIPWTPPGTALQFYSNLHNAETSSWVNLVLWCVVLVLQVVQ 186


>AK128779-1|BAC87608.1|  172|Homo sapiens protein ( Homo sapiens
          cDNA FLJ45443 fis, clone BRSSN2012157. ).
          Length = 172

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)

Query: 24 CVIVPMSMHQDEFSGNCLLFSKGVWQEDGQLLVSWASRFYCNYVIL 69
          C+++P+S +++ FS     F   V+ E G   VSWA   +C++  L
Sbjct: 41 CIVLPVSSNRNHFSSTS--FYLFVFYETGSHSVSWAGVRWCDHCSL 84


>BC062563-1|AAH62563.1|  449|Homo sapiens MFSD11 protein protein.
          Length = 449

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 10/82 (12%)

Query: 55  LVSWASRFYCNYVILVGILMFLVCCVQIY-----RLSMLVYKGEDSS-FLSAFLE-AVGC 107
           L+S  +RF  N V+L+GIL+  +    I+        +   KG DSS ++ +  E A+ C
Sbjct: 298 LLSKNNRFGRNPVVLLGILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKSSKEVAILC 357

Query: 108 TVLCGLGVS---AALMVTLGFM 126
           + L GLG S     L+  LGF+
Sbjct: 358 SFLLGLGDSCFNTQLLSILGFL 379


>BC002753-1|AAH02753.1|  449|Homo sapiens major facilitator
           superfamily domain containing 11 protein.
          Length = 449

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 10/82 (12%)

Query: 55  LVSWASRFYCNYVILVGILMFLVCCVQIY-----RLSMLVYKGEDSS-FLSAFLE-AVGC 107
           L+S  +RF  N V+L+GIL+  +    I+        +   KG DSS ++ +  E A+ C
Sbjct: 298 LLSKNNRFGRNPVVLLGILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKSSKEVAILC 357

Query: 108 TVLCGLGVS---AALMVTLGFM 126
           + L GLG S     L+  LGF+
Sbjct: 358 SFLLGLGDSCFNTQLLSILGFL 379


>AK000233-1|BAA91025.1|  449|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20226 fis, clone COLF5064. ).
          Length = 449

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 10/82 (12%)

Query: 55  LVSWASRFYCNYVILVGILMFLVCCVQIY-----RLSMLVYKGEDSS-FLSAFLE-AVGC 107
           L+S  +RF  N V+L+GIL+  +    I+        +   KG DSS ++ +  E A+ C
Sbjct: 298 LLSKNNRFGRNPVVLLGILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKSSKEVAILC 357

Query: 108 TVLCGLGVS---AALMVTLGFM 126
           + L GLG S     L+  LGF+
Sbjct: 358 SFLLGLGDSCFNTQLLSILGFL 379


>AF015186-1|AAB92497.1|  449|Homo sapiens ET putative translation
           product protein.
          Length = 449

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 10/82 (12%)

Query: 55  LVSWASRFYCNYVILVGILMFLVCCVQIY-----RLSMLVYKGEDSS-FLSAFLE-AVGC 107
           L+S  +RF  N V+L+GIL+  +    I+        +   KG DSS ++ +  E A+ C
Sbjct: 298 LLSKNNRFGRNPVVLLGILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKSSKEVAILC 357

Query: 108 TVLCGLGVS---AALMVTLGFM 126
           + L GLG S     L+  LGF+
Sbjct: 358 SFLLGLGDSCFNTQLLSILGFL 379


>AF015185-1|AAB92496.1|  397|Homo sapiens ET putative translation
           product protein.
          Length = 397

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 10/82 (12%)

Query: 55  LVSWASRFYCNYVILVGILMFLVCCVQIY-----RLSMLVYKGEDSS-FLSAFLE-AVGC 107
           L+S  +RF  N V+L+GIL+  +    I+        +   KG DSS ++ +  E A+ C
Sbjct: 246 LLSKNNRFGRNPVVLLGILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKSSKEVAILC 305

Query: 108 TVLCGLGVS---AALMVTLGFM 126
           + L GLG S     L+  LGF+
Sbjct: 306 SFLLGLGDSCFNTQLLSILGFL 327


>AF015184-1|AAB92495.1|  449|Homo sapiens ET putative translation
           product protein.
          Length = 449

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 10/82 (12%)

Query: 55  LVSWASRFYCNYVILVGILMFLVCCVQIY-----RLSMLVYKGEDSS-FLSAFLE-AVGC 107
           L+S  +RF  N V+L+GIL+  +    I+        +   KG DSS ++ +  E A+ C
Sbjct: 298 LLSKNNRFGRNPVVLLGILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKSSKEVAILC 357

Query: 108 TVLCGLGVS---AALMVTLGFM 126
           + L GLG S     L+  LGF+
Sbjct: 358 SFLLGLGDSCFNTQLLSILGFL 379


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.326    0.138    0.433 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,638,455
Number of Sequences: 224733
Number of extensions: 1309521
Number of successful extensions: 3426
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3422
Number of HSP's gapped (non-prelim): 9
length of query: 226
length of database: 73,234,838
effective HSP length: 87
effective length of query: 139
effective length of database: 53,683,067
effective search space: 7461946313
effective search space used: 7461946313
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 64 (29.9 bits)