Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000769-TA|BGIBMGA000769-PA|IPR011701|Major facilitator
superfamily MFS_1, IPR007114|Major facilitator superfamily,
IPR005829|Sugar transporter superfamily
         (479 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    25   1.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   2.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    24   2.7  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   3.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.6  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   8.2  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    22   8.2  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    22   8.2  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 34  EPSVFHALVVIFLEFFAWGLLTM 56
           EP + H L+ IF+  F W ++ M
Sbjct: 90  EPKLRHYLIFIFVNVFFWVIILM 112


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 8/20 (40%), Positives = 15/20 (75%)

Query: 133 SGVFAVTFSIVFAYVADVTT 152
           +G FA+ +++VF+ +  VTT
Sbjct: 625 AGFFAINYTLVFSILGGVTT 644


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 8/20 (40%), Positives = 15/20 (75%)

Query: 133 SGVFAVTFSIVFAYVADVTT 152
           +G FA+ +++VF+ +  VTT
Sbjct: 350 AGFFAINYTLVFSILGGVTT 369


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)

Query: 118 LMTINTWWFFAMISISGVFAVTFSIVFAYVADVTTEAERSRAYGLV 163
           L+ +N + FF  +    +   TF+IVF Y+  +  E ER +   L+
Sbjct: 24  LVPLNPYQFFLAVQYPRIVVSTFNIVF-YMYTLILE-ERFKLINLI 67


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 10/67 (14%)

Query: 9   TEVEMVIRNRKTVMKDGIMTMS------GIGEPSVFH----ALVVIFLEFFAWGLLTMPI 58
           TE+ ++++NR  ++   ++ M        +G+    H     L+ +F E F  GLL M  
Sbjct: 822 TELVLMLKNRYIILNGRLIKMETKAQSVALGKICTLHHHLSKLIRLFNEIFGHGLLLMFG 881

Query: 59  ISVLNAT 65
           IS L  T
Sbjct: 882 ISFLLVT 888


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 8/22 (36%), Positives = 15/22 (68%)

Query: 131 SISGVFAVTFSIVFAYVADVTT 152
           S+ G F V ++++++ V  VTT
Sbjct: 355 SVLGFFVVDYTLLYSIVGAVTT 376


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
          activity of ets genes protein.
          Length = 108

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 67 PDHTFLMNGLIMGIKGILSFLS-APLIGAL 95
          P   FLMNG  + +  +  FLS  PL G L
Sbjct: 61 PSSRFLMNGKALCLMSLGMFLSRVPLGGKL 90


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
          modulator protein.
          Length = 108

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 67 PDHTFLMNGLIMGIKGILSFLS-APLIGAL 95
          P   FLMNG  + +  +  FLS  PL G L
Sbjct: 61 PSSRFLMNGKALCLMSLGMFLSRVPLGGKL 90


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.328    0.141    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,770
Number of Sequences: 317
Number of extensions: 4525
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 9
length of query: 479
length of database: 114,650
effective HSP length: 59
effective length of query: 420
effective length of database: 95,947
effective search space: 40297740
effective search space used: 40297740
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 45 (22.2 bits)