Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000768-TA|BGIBMGA000768-PA|IPR007000|Laminin A
(978 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U57314-1|AAB49926.1| 624|Drosophila melanogaster LAMA protein. 98 5e-20
BT001475-1|AAN71230.1| 658|Drosophila melanogaster LD13253p pro... 97 8e-20
AE014296-945|AAN12118.2| 658|Drosophila melanogaster CG10645-PC... 97 8e-20
AE014296-944|AAF50787.3| 658|Drosophila melanogaster CG10645-PB... 97 8e-20
AE014296-943|AAG22333.2| 658|Drosophila melanogaster CG10645-PA... 97 8e-20
>U57314-1|AAB49926.1| 624|Drosophila melanogaster LAMA protein.
Length = 624
Score = 98.3 bits (234), Expect = 5e-20
Identities = 95/347 (27%), Positives = 136/347 (39%), Gaps = 56/347 (16%)
Query: 584 CALIEDYLDKNEDYIASMVQEHYEDPYWYQIKLYYIQLEGLAAGY----NDATKSMYEWL 639
C + D L N + ++ D YW+Q+ L+ QLEGL GY + A + E +
Sbjct: 108 CGWLRDLLTTNYHRLKRQTEKAENDHYWHQLHLFITQLEGLETGYKRGASRARSDLEEEI 167
Query: 640 TVRDILWINMLGDLDDLAFALSM------------PRETPEGLMFGEHCSGLVKLL---- 683
D L +N D+ DL PR F + L K++
Sbjct: 168 PFSDFLLMNAAADIQDLKIYYENYELQNSTEHTEEPRTDQPKNFFLPSATMLTKIVQEEE 227
Query: 684 -PDLSDLYTAQVTWNSYQSMLRIQKMYVMNY-MTSPGSGVLIPGRKMSLSSYPAFVQSTD 741
P + L T SY SMLRIQK Y +Y +S +PG ++ + YP + STD
Sbjct: 228 SPQVLQLLFGHSTAGSYSSMLRIQKRYKFHYHFSSKLRSNTVPGVDITFTGYPGILGSTD 287
Query: 742 DFYVMSS---GLVAAETTIGNSNRTLYEHVRPEGQILEFVRAMVANRLATDGARWVRLFR 798
DFY + + I N N L++ V P+ + R M ANR++ + W
Sbjct: 288 DFYTIKGRHLHAIVGGVGIKNENLQLWKTVDPKKMVPLVARVMAANRISQNRQTWASAMS 347
Query: 799 DHNSGTYNNQWYVVDYNK-------FTPAVGKMKGSVRPGLL------------------ 833
H T QW VD NK + G K P +L
Sbjct: 348 RH-PFTGAKQWITVDLNKMKVQDNLYNVLEGDDKHDDAPVVLNEKDRTAIQQRHDQLRDM 406
Query: 834 -WVVEQLPGYTEAADITEEL---KQTSYFPSYNIAYFPSVFNLSGGN 876
W+ EQLPG D+T+ TS+ + + YF +V LSG N
Sbjct: 407 VWIAEQLPGMMTKKDVTQGFLVPGNTSWLAN-GVPYFKNVLELSGVN 452
>BT001475-1|AAN71230.1| 658|Drosophila melanogaster LD13253p
protein.
Length = 658
Score = 97.5 bits (232), Expect = 8e-20
Identities = 97/347 (27%), Positives = 139/347 (40%), Gaps = 56/347 (16%)
Query: 584 CALIEDYLDKNEDYIASMVQEHYEDPYWYQIKLYYIQLEGLAAGY----NDATKSMYEWL 639
C + D L N + ++ D YW+Q+ L+ QLEGL GY + A + E +
Sbjct: 142 CGWLRDLLTTNYHRLKRQTEKAENDHYWHQLHLFITQLEGLETGYKRGASRARSDLEEEI 201
Query: 640 TVRDILWINMLGDLDDLA-----FALSMPRETPE--GL-----MFGEHCSGLVKLL---- 683
D L +N D+ DL + L E E G F + L K++
Sbjct: 202 PFSDFLLMNAAADIQDLKIYYENYELQNSTEHTEEPGTDQPKNFFLPSATMLTKIVQEEE 261
Query: 684 -PDLSDLYTAQVTWNSYQSMLRIQKMYVMNY-MTSPGSGVLIPGRKMSLSSYPAFVQSTD 741
P + L T SY SMLRIQK Y +Y +S +PG ++ + YP + STD
Sbjct: 262 SPQVLQLLFGHSTAGSYSSMLRIQKRYKFHYHFSSKLRSNTVPGVDITFTGYPGILGSTD 321
Query: 742 DFYVMSS---GLVAAETTIGNSNRTLYEHVRPEGQILEFVRAMVANRLATDGARWVRLFR 798
DFY + + I N N L++ V P+ + R M ANR++ + W
Sbjct: 322 DFYTIKGRHLHAIVGGVGIKNENLQLWKTVDPKKMVPLVARVMAANRISQNRQTWASAMS 381
Query: 799 DHNSGTYNNQWYVVDYNK-------FTPAVGKMKGSVRPGLL------------------ 833
H T QW VD NK + G K P +L
Sbjct: 382 RH-PFTGAKQWITVDLNKMKVQDNLYNVLEGDDKHDDAPVVLNENDRTAIQQRHDQLRDM 440
Query: 834 -WVVEQLPGYTEAADITEEL---KQTSYFPSYNIAYFPSVFNLSGGN 876
W+ EQLPG D+T+ TS+ + + YF +V LSG N
Sbjct: 441 VWIAEQLPGMMTKKDVTQGFLVPGNTSWLAN-GVPYFKNVLELSGVN 486
>AE014296-945|AAN12118.2| 658|Drosophila melanogaster CG10645-PC,
isoform C protein.
Length = 658
Score = 97.5 bits (232), Expect = 8e-20
Identities = 97/347 (27%), Positives = 139/347 (40%), Gaps = 56/347 (16%)
Query: 584 CALIEDYLDKNEDYIASMVQEHYEDPYWYQIKLYYIQLEGLAAGY----NDATKSMYEWL 639
C + D L N + ++ D YW+Q+ L+ QLEGL GY + A + E +
Sbjct: 142 CGWLRDLLTTNYHRLKRQTEKAENDHYWHQLHLFITQLEGLETGYKRGASRARSDLEEEI 201
Query: 640 TVRDILWINMLGDLDDLA-----FALSMPRETPE--GL-----MFGEHCSGLVKLL---- 683
D L +N D+ DL + L E E G F + L K++
Sbjct: 202 PFSDFLLMNAAADIQDLKIYYENYELQNSTEHTEEPGTDQPKNFFLPSATMLTKIVQEEE 261
Query: 684 -PDLSDLYTAQVTWNSYQSMLRIQKMYVMNY-MTSPGSGVLIPGRKMSLSSYPAFVQSTD 741
P + L T SY SMLRIQK Y +Y +S +PG ++ + YP + STD
Sbjct: 262 SPQVLQLLFGHSTAGSYSSMLRIQKRYKFHYHFSSKLRSNTVPGVDITFTGYPGILGSTD 321
Query: 742 DFYVMSS---GLVAAETTIGNSNRTLYEHVRPEGQILEFVRAMVANRLATDGARWVRLFR 798
DFY + + I N N L++ V P+ + R M ANR++ + W
Sbjct: 322 DFYTIKGRHLHAIVGGVGIKNENLQLWKTVDPKKMVPLVARVMAANRISQNRQTWASAMS 381
Query: 799 DHNSGTYNNQWYVVDYNK-------FTPAVGKMKGSVRPGLL------------------ 833
H T QW VD NK + G K P +L
Sbjct: 382 RH-PFTGAKQWITVDLNKMKVQDNLYNVLEGDDKHDDAPVVLNEKDRTAIQQRHDQLRDM 440
Query: 834 -WVVEQLPGYTEAADITEEL---KQTSYFPSYNIAYFPSVFNLSGGN 876
W+ EQLPG D+T+ TS+ + + YF +V LSG N
Sbjct: 441 VWIAEQLPGMMTKKDVTQGFLVPGNTSWLAN-GVPYFKNVLELSGVN 486
>AE014296-944|AAF50787.3| 658|Drosophila melanogaster CG10645-PB,
isoform B protein.
Length = 658
Score = 97.5 bits (232), Expect = 8e-20
Identities = 97/347 (27%), Positives = 139/347 (40%), Gaps = 56/347 (16%)
Query: 584 CALIEDYLDKNEDYIASMVQEHYEDPYWYQIKLYYIQLEGLAAGY----NDATKSMYEWL 639
C + D L N + ++ D YW+Q+ L+ QLEGL GY + A + E +
Sbjct: 142 CGWLRDLLTTNYHRLKRQTEKAENDHYWHQLHLFITQLEGLETGYKRGASRARSDLEEEI 201
Query: 640 TVRDILWINMLGDLDDLA-----FALSMPRETPE--GL-----MFGEHCSGLVKLL---- 683
D L +N D+ DL + L E E G F + L K++
Sbjct: 202 PFSDFLLMNAAADIQDLKIYYENYELQNSTEHTEEPGTDQPKNFFLPSATMLTKIVQEEE 261
Query: 684 -PDLSDLYTAQVTWNSYQSMLRIQKMYVMNY-MTSPGSGVLIPGRKMSLSSYPAFVQSTD 741
P + L T SY SMLRIQK Y +Y +S +PG ++ + YP + STD
Sbjct: 262 SPQVLQLLFGHSTAGSYSSMLRIQKRYKFHYHFSSKLRSNTVPGVDITFTGYPGILGSTD 321
Query: 742 DFYVMSS---GLVAAETTIGNSNRTLYEHVRPEGQILEFVRAMVANRLATDGARWVRLFR 798
DFY + + I N N L++ V P+ + R M ANR++ + W
Sbjct: 322 DFYTIKGRHLHAIVGGVGIKNENLQLWKTVDPKKMVPLVARVMAANRISQNRQTWASAMS 381
Query: 799 DHNSGTYNNQWYVVDYNK-------FTPAVGKMKGSVRPGLL------------------ 833
H T QW VD NK + G K P +L
Sbjct: 382 RH-PFTGAKQWITVDLNKMKVQDNLYNVLEGDDKHDDAPVVLNEKDRTAIQQRHDQLRDM 440
Query: 834 -WVVEQLPGYTEAADITEEL---KQTSYFPSYNIAYFPSVFNLSGGN 876
W+ EQLPG D+T+ TS+ + + YF +V LSG N
Sbjct: 441 VWIAEQLPGMMTKKDVTQGFLVPGNTSWLAN-GVPYFKNVLELSGVN 486
>AE014296-943|AAG22333.2| 658|Drosophila melanogaster CG10645-PA,
isoform A protein.
Length = 658
Score = 97.5 bits (232), Expect = 8e-20
Identities = 97/347 (27%), Positives = 139/347 (40%), Gaps = 56/347 (16%)
Query: 584 CALIEDYLDKNEDYIASMVQEHYEDPYWYQIKLYYIQLEGLAAGY----NDATKSMYEWL 639
C + D L N + ++ D YW+Q+ L+ QLEGL GY + A + E +
Sbjct: 142 CGWLRDLLTTNYHRLKRQTEKAENDHYWHQLHLFITQLEGLETGYKRGASRARSDLEEEI 201
Query: 640 TVRDILWINMLGDLDDLA-----FALSMPRETPE--GL-----MFGEHCSGLVKLL---- 683
D L +N D+ DL + L E E G F + L K++
Sbjct: 202 PFSDFLLMNAAADIQDLKIYYENYELQNSTEHTEEPGTDQPKNFFLPSATMLTKIVQEEE 261
Query: 684 -PDLSDLYTAQVTWNSYQSMLRIQKMYVMNY-MTSPGSGVLIPGRKMSLSSYPAFVQSTD 741
P + L T SY SMLRIQK Y +Y +S +PG ++ + YP + STD
Sbjct: 262 SPQVLQLLFGHSTAGSYSSMLRIQKRYKFHYHFSSKLRSNTVPGVDITFTGYPGILGSTD 321
Query: 742 DFYVMSS---GLVAAETTIGNSNRTLYEHVRPEGQILEFVRAMVANRLATDGARWVRLFR 798
DFY + + I N N L++ V P+ + R M ANR++ + W
Sbjct: 322 DFYTIKGRHLHAIVGGVGIKNENLQLWKTVDPKKMVPLVARVMAANRISQNRQTWASAMS 381
Query: 799 DHNSGTYNNQWYVVDYNK-------FTPAVGKMKGSVRPGLL------------------ 833
H T QW VD NK + G K P +L
Sbjct: 382 RH-PFTGAKQWITVDLNKMKVQDNLYNVLEGDDKHDDAPVVLNEKDRTAIQQRHDQLRDM 440
Query: 834 -WVVEQLPGYTEAADITEEL---KQTSYFPSYNIAYFPSVFNLSGGN 876
W+ EQLPG D+T+ TS+ + + YF +V LSG N
Sbjct: 441 VWIAEQLPGMMTKKDVTQGFLVPGNTSWLAN-GVPYFKNVLELSGVN 486
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.322 0.137 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,753,839
Number of Sequences: 52641
Number of extensions: 2053423
Number of successful extensions: 4453
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4428
Number of HSP's gapped (non-prelim): 15
length of query: 978
length of database: 24,830,863
effective HSP length: 92
effective length of query: 886
effective length of database: 19,987,891
effective search space: 17709271426
effective search space used: 17709271426
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 67 (31.1 bits)
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