GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000767-TA|BGIBMGA000767-PA|IPR003191|Guanylate-binding
protein
         (564 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   7.5  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    22   9.9  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 496 IRYSGEMREFGVTIDDTATVMW 517
           + Y+GE  +F VT D    V W
Sbjct: 322 VTYAGERFDFIVTADQPQDVYW 343


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 191 EDGGRTPFQRLQFLVRDWSFPYEAPYGADG 220
           +DG RT  + L    RDW    EA Y   G
Sbjct: 81  QDGSRTIIRYLIKNKRDWWNELEAKYDPTG 110


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.136    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,056
Number of Sequences: 317
Number of extensions: 4398
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 2
length of query: 564
length of database: 114,650
effective HSP length: 60
effective length of query: 504
effective length of database: 95,630
effective search space: 48197520
effective search space used: 48197520
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)