GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000767-TA|BGIBMGA000767-PA|IPR003191|Guanylate-binding
protein
         (564 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF513637-1|AAM53609.1|  214|Anopheles gambiae glutathione S-tran...    27   1.8  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    26   3.1  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   7.1  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   9.4  

>AF513637-1|AAM53609.1|  214|Anopheles gambiae glutathione
           S-transferase D11 protein.
          Length = 214

 Score = 26.6 bits (56), Expect = 1.8
 Identities = 22/98 (22%), Positives = 49/98 (50%), Gaps = 13/98 (13%)

Query: 277 DIESEFKRSLQQFVPMLLAPENLVPKLINGQKVKAKDLVQYFKSYMN---IYKGNELPEP 333
           D+ + ++R  Q F P+++  + L P+L+    VK  + +++ +S+++      G++L   
Sbjct: 100 DMGTLYQRFSQAFYPVMMEGKELNPELV----VKLDEALEFLESFLDKTPFAAGDKLTVA 155

Query: 334 KSMLVATAEANNLTA------VAEAKEVYTRLMEEVCG 365
              L+ +    ++TA       A  +  Y++L E V G
Sbjct: 156 DFSLLTSITTIDVTAGHDLSKYANIQRWYSQLQESVAG 193


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 25.8 bits (54), Expect = 3.1
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 294 LAPENLVPKLINGQKVKAKDLVQYFKSYMNIYKGNELPEPKSMLVATAEANNLTA 348
           L PE L PKL     V    L      Y  +Y+G + PE  +  +A     +LT+
Sbjct: 99  LKPE-LSPKLYQPTDVSPPKLSPKEDYYRKLYRGEKTPERYAPYLAVRPVESLTS 152


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.6 bits (51), Expect = 7.1
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 334 KSMLVATAEANNLTAVAEAKEVYTRLMEEVCGGGRPYLHADLLLTEHQRVRDKAMYAFNA 393
           K+ LV       + A+  AKE  T L EE+ G G      + L  E Q   ++  + +  
Sbjct: 141 KNFLVFQGAVETI-AIKNAKE-RTALFEEISGSGLLKEDYNRLKHEMQMAEEETQFTYQK 198

Query: 394 KR 395
           KR
Sbjct: 199 KR 200


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.2 bits (50), Expect = 9.4
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 469 LLGLYPLANVANFAMGLALLTLVLWAYIRYSGEMREFGVTIDDTATVMWDNVLKPMYQ 526
           +LG+  LA +A   + + +  L+LW  +    + REF     +     WD    P+Y+
Sbjct: 768 MLGIV-LAVIAVVVL-IGMAVLLLWKVLTSIHDRREFARFEKERMMAKWDTGENPIYK 823


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.136    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 514,930
Number of Sequences: 2123
Number of extensions: 18909
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 25
Number of HSP's gapped (non-prelim): 4
length of query: 564
length of database: 516,269
effective HSP length: 68
effective length of query: 496
effective length of database: 371,905
effective search space: 184464880
effective search space used: 184464880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 50 (24.2 bits)