Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000767-TA|BGIBMGA000767-PA|IPR003191|Guanylate-binding
protein
(564 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative guan... 555 e-158
AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical ... 555 e-158
AC024817-8|AAU05551.1| 535|Caenorhabditis elegans Hypothetical ... 540 e-153
Z95559-2|CAB09000.3| 520|Caenorhabditis elegans Hypothetical pr... 298 6e-81
U80953-2|AAB52556.1| 1107|Caenorhabditis elegans Hypothetical pr... 32 0.94
>AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative
guanylate-binding protein protein.
Length = 573
Score = 555 bits (1371), Expect = e-158
Identities = 276/519 (53%), Positives = 351/519 (67%), Gaps = 21/519 (4%)
Query: 13 PRGPHGVQVVDT--GPDHTFTLDEEALKSLLLKEDVRDRAVVVISVAGAFRKGKSFLLDF 70
P+ P V+VV+ DH+F L+ E L+ +LL V D+ V VI VAGA+RKGKSFLL+F
Sbjct: 27 PKEPQAVRVVEVVEDTDHSFELNTELLEKILLDPKVADKKVAVIGVAGAYRKGKSFLLNF 86
Query: 71 FLRYMHYKYXXXXXXXXXXXXXXD------PLQGFSWRGGSERDTTGILMWSEIFKATLD 124
FLRY+ ++ PL GFSWRGGSERDT GIL+WSE F
Sbjct: 87 FLRYLTWRSKADKVMGEVELDNSQWMSPNSPLSGFSWRGGSERDTNGILIWSEPFIMKDK 146
Query: 125 DGEKVAIILLDTQGAFDSESTVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTE 184
+GE++A++L+DTQGAFDS+STV+DCAT+FALSTM+SSVQIYNLSQNIQEDDLQHLQLFTE
Sbjct: 147 NGEEIAVLLMDTQGAFDSQSTVKDCATIFALSTMISSVQIYNLSQNIQEDDLQHLQLFTE 206
Query: 185 YGRLALEDGGRTPFQRLQFLVRDWSFPYEAPYGADGGMQILSRRLKVSDKQHPELQSLRK 244
YGRLALED PFQ L FLVRDWSFPYEA +G GG ++L RRL+VS+KQH ELQ LR+
Sbjct: 207 YGRLALEDSASKPFQSLLFLVRDWSFPYEAEFGFQGGQRVLDRRLEVSEKQHAELQQLRQ 266
Query: 245 HITACFSELACFLMPHPGLKVATNPQFDGRLADIESEFKRSLQQFVPMLLAPENLVPKLI 304
HI +CF ++ CFLMPHPGLKVATNP FDG+L DIE+EF++ L +P LL LV K I
Sbjct: 267 HIRSCFEDIRCFLMPHPGLKVATNPNFDGKLVDIENEFQQQLGVMIPRLLDSHALVHKEI 326
Query: 305 NGQKVKAKDLVQYFKSYMNIYKGNELPEPKSMLVATAEANNLTAVAEAKEVYTRLMEEVC 364
NGQK+ ++L++YFK+YM+I++G +LPEPKSML+ATAEANNL AVA A+ VY R MEEVC
Sbjct: 327 NGQKMTCRELLEYFKAYMHIFRGQDLPEPKSMLMATAEANNLAAVASARAVYQREMEEVC 386
Query: 365 GGGRPYLHADLLLTEHQRVRDKAMYAFNAKRKMGGRDFSQAYFDQLAQPRXXXXXXXXXX 424
GG PY+ + LL H RV++ A+ F RKMGG DFS + ++L
Sbjct: 387 GGDTPYMSTNELLEHHDRVKNIAIREFRNARKMGGVDFSMQFLERL-------------E 433
Query: 425 XXLEEQFLQFKAHNESKNIFKAARTPSXXXXXXXXXXXXSGVFGLLGLYPLANVANFAMG 484
L+E + + N KN+FK+ RTP+ F L+GL +A + + +
Sbjct: 434 SDLQESYENYLKVNNGKNLFKSMRTPTVLVTLMIIDYIFQEFFQLIGLDFIAGLCSSVLC 493
Query: 485 LALLTLVLWAYIRYSGEMREFGVTIDDTATVMWDNVLKP 523
L + L +WAY RYSG +RE G +DD T +W N + P
Sbjct: 494 LVIGALGVWAYSRYSGHLREAGGYVDDAVTYVWTNFISP 532
>AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical
protein Y54G2A.2a protein.
Length = 573
Score = 555 bits (1371), Expect = e-158
Identities = 276/519 (53%), Positives = 351/519 (67%), Gaps = 21/519 (4%)
Query: 13 PRGPHGVQVVDT--GPDHTFTLDEEALKSLLLKEDVRDRAVVVISVAGAFRKGKSFLLDF 70
P+ P V+VV+ DH+F L+ E L+ +LL V D+ V VI VAGA+RKGKSFLL+F
Sbjct: 27 PKEPQAVRVVEVVEDTDHSFELNTELLEKILLDPKVADKKVAVIGVAGAYRKGKSFLLNF 86
Query: 71 FLRYMHYKYXXXXXXXXXXXXXXD------PLQGFSWRGGSERDTTGILMWSEIFKATLD 124
FLRY+ ++ PL GFSWRGGSERDT GIL+WSE F
Sbjct: 87 FLRYLTWRSKADKVMGEVELDNSQWMSPNSPLSGFSWRGGSERDTNGILIWSEPFIMKDK 146
Query: 125 DGEKVAIILLDTQGAFDSESTVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTE 184
+GE++A++L+DTQGAFDS+STV+DCAT+FALSTM+SSVQIYNLSQNIQEDDLQHLQLFTE
Sbjct: 147 NGEEIAVLLMDTQGAFDSQSTVKDCATIFALSTMISSVQIYNLSQNIQEDDLQHLQLFTE 206
Query: 185 YGRLALEDGGRTPFQRLQFLVRDWSFPYEAPYGADGGMQILSRRLKVSDKQHPELQSLRK 244
YGRLALED PFQ L FLVRDWSFPYEA +G GG ++L RRL+VS+KQH ELQ LR+
Sbjct: 207 YGRLALEDSASKPFQSLLFLVRDWSFPYEAEFGFQGGQRVLDRRLEVSEKQHAELQQLRQ 266
Query: 245 HITACFSELACFLMPHPGLKVATNPQFDGRLADIESEFKRSLQQFVPMLLAPENLVPKLI 304
HI +CF ++ CFLMPHPGLKVATNP FDG+L DIE+EF++ L +P LL LV K I
Sbjct: 267 HIRSCFEDIRCFLMPHPGLKVATNPNFDGKLVDIENEFQQQLGVMIPRLLDSHALVHKEI 326
Query: 305 NGQKVKAKDLVQYFKSYMNIYKGNELPEPKSMLVATAEANNLTAVAEAKEVYTRLMEEVC 364
NGQK+ ++L++YFK+YM+I++G +LPEPKSML+ATAEANNL AVA A+ VY R MEEVC
Sbjct: 327 NGQKMTCRELLEYFKAYMHIFRGQDLPEPKSMLMATAEANNLAAVASARAVYQREMEEVC 386
Query: 365 GGGRPYLHADLLLTEHQRVRDKAMYAFNAKRKMGGRDFSQAYFDQLAQPRXXXXXXXXXX 424
GG PY+ + LL H RV++ A+ F RKMGG DFS + ++L
Sbjct: 387 GGDTPYMSTNELLEHHDRVKNIAIREFRNARKMGGVDFSMQFLERL-------------E 433
Query: 425 XXLEEQFLQFKAHNESKNIFKAARTPSXXXXXXXXXXXXSGVFGLLGLYPLANVANFAMG 484
L+E + + N KN+FK+ RTP+ F L+GL +A + + +
Sbjct: 434 SDLQESYENYLKVNNGKNLFKSMRTPTVLVTLMIIDYIFQEFFQLIGLDFIAGLCSSVLC 493
Query: 485 LALLTLVLWAYIRYSGEMREFGVTIDDTATVMWDNVLKP 523
L + L +WAY RYSG +RE G +DD T +W N + P
Sbjct: 494 LVIGALGVWAYSRYSGHLREAGGYVDDAVTYVWTNFISP 532
>AC024817-8|AAU05551.1| 535|Caenorhabditis elegans Hypothetical
protein Y54G2A.2b protein.
Length = 535
Score = 540 bits (1332), Expect = e-153
Identities = 270/502 (53%), Positives = 342/502 (68%), Gaps = 21/502 (4%)
Query: 13 PRGPHGVQVVDT--GPDHTFTLDEEALKSLLLKEDVRDRAVVVISVAGAFRKGKSFLLDF 70
P+ P V+VV+ DH+F L+ E L+ +LL V D+ V VI VAGA+RKGKSFLL+F
Sbjct: 27 PKEPQAVRVVEVVEDTDHSFELNTELLEKILLDPKVADKKVAVIGVAGAYRKGKSFLLNF 86
Query: 71 FLRYMHYKYXXXXXXXXXXXXXXD------PLQGFSWRGGSERDTTGILMWSEIFKATLD 124
FLRY+ ++ PL GFSWRGGSERDT GIL+WSE F
Sbjct: 87 FLRYLTWRSKADKVMGEVELDNSQWMSPNSPLSGFSWRGGSERDTNGILIWSEPFIMKDK 146
Query: 125 DGEKVAIILLDTQGAFDSESTVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTE 184
+GE++A++L+DTQGAFDS+STV+DCAT+FALSTM+SSVQIYNLSQNIQEDDLQHLQLFTE
Sbjct: 147 NGEEIAVLLMDTQGAFDSQSTVKDCATIFALSTMISSVQIYNLSQNIQEDDLQHLQLFTE 206
Query: 185 YGRLALEDGGRTPFQRLQFLVRDWSFPYEAPYGADGGMQILSRRLKVSDKQHPELQSLRK 244
YGRLALED PFQ L FLVRDWSFPYEA +G GG ++L RRL+VS+KQH ELQ LR+
Sbjct: 207 YGRLALEDSASKPFQSLLFLVRDWSFPYEAEFGFQGGQRVLDRRLEVSEKQHAELQQLRQ 266
Query: 245 HITACFSELACFLMPHPGLKVATNPQFDGRLADIESEFKRSLQQFVPMLLAPENLVPKLI 304
HI +CF ++ CFLMPHPGLKVATNP FDG+L DIE+EF++ L +P LL LV K I
Sbjct: 267 HIRSCFEDIRCFLMPHPGLKVATNPNFDGKLVDIENEFQQQLGVMIPRLLDSHALVHKEI 326
Query: 305 NGQKVKAKDLVQYFKSYMNIYKGNELPEPKSMLVATAEANNLTAVAEAKEVYTRLMEEVC 364
NGQK+ ++L++YFK+YM+I++G +LPEPKSML+ATAEANNL AVA A+ VY R MEEVC
Sbjct: 327 NGQKMTCRELLEYFKAYMHIFRGQDLPEPKSMLMATAEANNLAAVASARAVYQREMEEVC 386
Query: 365 GGGRPYLHADLLLTEHQRVRDKAMYAFNAKRKMGGRDFSQAYFDQLAQPRXXXXXXXXXX 424
GG PY+ + LL H RV++ A+ F RKMGG DFS + ++L
Sbjct: 387 GGDTPYMSTNELLEHHDRVKNIAIREFRNARKMGGVDFSMQFLERL-------------E 433
Query: 425 XXLEEQFLQFKAHNESKNIFKAARTPSXXXXXXXXXXXXSGVFGLLGLYPLANVANFAMG 484
L+E + + N KN+FK+ RTP+ F L+GL +A + + +
Sbjct: 434 SDLQESYENYLKVNNGKNLFKSMRTPTVLVTLMIIDYIFQEFFQLIGLDFIAGLCSSVLC 493
Query: 485 LALLTLVLWAYIRYSGEMREFG 506
L + L +WAY RYSG +RE G
Sbjct: 494 LVIGALGVWAYSRYSGHLREAG 515
>Z95559-2|CAB09000.3| 520|Caenorhabditis elegans Hypothetical
protein Y41E3.3 protein.
Length = 520
Score = 298 bits (732), Expect = 6e-81
Identities = 157/386 (40%), Positives = 225/386 (58%), Gaps = 4/386 (1%)
Query: 30 FTLDEEALKSLLLKEDVRDRAVVVISVAGAFRKGKSFLLDFFLRYMHYKYXXXXXXXXXX 89
F L+E AL S+L ++ +V+ISVAGAFRKGKSFLL+FFL Y++ +
Sbjct: 43 FRLNESALNSVLGHSACANKKIVIISVAGAFRKGKSFLLNFFLEYLYSLHKSQQSDSSLE 102
Query: 90 XXXXD-PLQGFSWRGGSERDTTGILMWSEIFKATLDDGEKVAIILLDTQGAFDSESTVRD 148
D L GF WR G +RDT GI +W E GE A++L+DTQG FD+ ST +
Sbjct: 103 WLTDDCQLHGFHWRAGVKRDTVGIWLWGEPIMIESVTGEMFAVVLMDTQGTFDNNSTYQQ 162
Query: 149 CATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALEDGGR--TPFQRLQFLVR 206
C TVFALST++SSVQIYN+ NIQED LQHL LF EYGR+A+E PFQ+L F VR
Sbjct: 163 CMTVFALSTIVSSVQIYNVVDNIQEDALQHLSLFVEYGRIAMEQPHNFGKPFQQLVFCVR 222
Query: 207 DWSFPYEAPYGADGGMQILSRRLKVSDKQHPELQSLRKHITACFSELACFLMPHPGLKVA 266
D+ E +G +GG L L+ + +Q E++ +R+ + F ++ C+L+PHPG KVA
Sbjct: 223 DFKNQEEYEFGENGGTDFLDNVLQTNPEQPEEIKQVRELLREYFEDIQCYLLPHPGYKVA 282
Query: 267 TNPQFDGRLADIESEFKRSLQQFVPMLLAPENLVPKLINGQKVKAKDLVQYFKSYMNIYK 326
F G + D+ F+ L++ VP LL P L PK++NG+ V + ++QYFK Y +
Sbjct: 283 ERQSFRGHVKDLRPLFREELKKMVPNLLGPHILKPKIVNGKTVTCRKMIQYFKEYAASFD 342
Query: 327 GNELPEPKSMLVATAEANNLTAVAEAKEVYTRLMEEVCGGGRPYLHADLLLTEHQRVRDK 386
G LP+P+S+L A A+ + A EAK Y+R M+ G R + LL H +
Sbjct: 343 GETLPQPQSILNANAKLICIEAAHEAKVNYSRGMDRSTYGTR-MMSEKKLLEAHIKHGIT 401
Query: 387 AMYAFNAKRKMGGRDFSQAYFDQLAQ 412
A+ F+ ++G ++ ++L +
Sbjct: 402 ALNIFDKCPRIGAKEVRNLLLEKLQE 427
>U80953-2|AAB52556.1| 1107|Caenorhabditis elegans Hypothetical
protein B0412.3 protein.
Length = 1107
Score = 32.3 bits (70), Expect = 0.94
Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 120 KATLDDGEKVAIILLDTQGAFDSESTVRDCATVFALSTMLSSVQIYNL-SQNIQEDDLQH 178
+ +L G K+A++L+ + S++ D A + LSS Q++ L + N+ + +
Sbjct: 116 RGSLRHGTKIALVLIQQKSTSISDNLAADRAHELCQACSLSSKQLFILPADNLLAPNTTN 175
Query: 179 LQLFTEYGRLALEDGGRTPFQRLQFLVRDWSFPYEAP 215
LQ F LA + + +Q+ +R + P +P
Sbjct: 176 LQNFALKLELAFHELCQAFYQQRLKTIRSRNIPNNSP 212
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.136 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,236,462
Number of Sequences: 27539
Number of extensions: 468332
Number of successful extensions: 989
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 977
Number of HSP's gapped (non-prelim): 5
length of query: 564
length of database: 12,573,161
effective HSP length: 85
effective length of query: 479
effective length of database: 10,232,346
effective search space: 4901293734
effective search space used: 4901293734
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
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