Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000765-TA|BGIBMGA000765-PA|IPR000795|Protein synthesis
factor, GTP-binding, IPR005225|Small GTP-binding protein domain,
IPR009022|Elongation factor G, III and V, IPR009000|Translation
factor, IPR004161|Elongation factor Tu, domain 2, IPR000640|Elongation
factor G, C-terminal
(774 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 298 2e-81
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 231 3e-61
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 97 6e-21
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 97 8e-21
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 96 2e-20
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 96 2e-20
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 72 3e-13
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 64 5e-11
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 54 6e-08
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 54 8e-08
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 54 8e-08
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 51 7e-07
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 50 2e-06
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 49 2e-06
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 40 0.001
SPBPB2B2.11 |||nucleotide-sugar 4,6-dehydratase |Schizosaccharom... 30 1.4
SPAC16A10.02 |||transcription coactivator Sub1 |Schizosaccharomy... 28 4.3
SPAC17H9.20 |psc3|SPAC607.01|mitotic cohesin complex, non-SMC su... 27 7.5
SPBC29A10.06c |||conserved fungal protein|Schizosaccharomyces po... 27 7.5
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 298 bits (731), Expect = 2e-81
Identities = 158/399 (39%), Positives = 237/399 (59%), Gaps = 21/399 (5%)
Query: 1 MENIRNIGILAHIDAGKTTTTERMLFYSGTIRSMGEVHHGNTVTDYMEQERQRGITITSA 60
+ +IRN+GI+AHIDAGKTT TE+ML+Y G G V G+TV DY+ ERQRGITI SA
Sbjct: 25 INSIRNVGIIAHIDAGKTTLTEKMLYYGGFTSHFGNVDTGDTVMDYLPAERQRGITINSA 84
Query: 61 AVTIPWRGGQINLIDTPGHIDFTMEVEQSLAVLDGAVIVLDGSAGVEAQTLTVWRQAIGY 120
A++ WR +INLIDTPGH DFT EVE+S+AVLDGAV ++DGSAGVEAQT VW+QA
Sbjct: 85 AISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAGVEAQTKVVWKQATKR 144
Query: 121 RVPRILYLNKMDRNDAFVEACVNSVTEKLQAT-PLLLHHTVRHEG----RLIGLIDLINL 175
+P+++++NKMDR + + + + S+ L PL+L V +G + +G++D++
Sbjct: 145 GIPKVIFVNKMDRVGSSLGSTIRSIYTNLDCPYPLVLQLPVYSDGLQERKFLGILDILQQ 204
Query: 176 EEIIWTQG---RGQKFTRRKLTEKDDGHKWEAAVTDHRQLVDTLSSIDDEIAETIINNE- 231
+ I+W G T + + H E + LV +L +D+ + + + NE
Sbjct: 205 KMILWDTSDNKLGTDGTHVQELPIPESH-MERFIEARNALVMSLCDVDETLCDEYLENED 263
Query: 232 SLELSARDIDNAVRRSTIKMKAFPILCGSSYKNIGVQTLMDGVMSYLPSPLEGHE----- 286
SL + + +++ TI P+LCGSS KNI VQ +MD ++ YLPSP+E +E
Sbjct: 264 SLAFTNDRLFKIIKQKTISGNVVPVLCGSSLKNIAVQPIMDAIIDYLPSPVEFYEKNASK 323
Query: 287 ------LYKCFGEELAGRAFKVIHDDQRGVLTFVRLYSGEMKKAQKIYNLGQDRSEQTGA 340
+ L + FKVIH RG+LT+VR+ G + + ++N +SE+
Sbjct: 324 ETSSDKIISLDKRPLLAKIFKVIHHASRGILTYVRVNEGTLSRGMMMFNPRTKKSERAIR 383
Query: 341 LYVALADEYRPVESVAAGNIAVVGSLKATMTGDLVTSTQ 379
LY AD+ + V+ ++AGNI V+ +K TGD++ + +
Sbjct: 384 LYNVFADQTQEVDCISAGNIGVISGIKQFHTGDIIINKE 422
Score = 82.2 bits (194), Expect = 2e-16
Identities = 90/359 (25%), Positives = 148/359 (41%), Gaps = 34/359 (9%)
Query: 433 TVPEPVFLCSIEPPSAMHQAALETALEQLQREDPSLRVNADDESGQIVLAGMGELHLXXX 492
++PEPV + SIEP S + AL AL + REDPS R D E+GQ+++ GMG +HL
Sbjct: 439 SIPEPVCIASIEPYSLKDEPALLEALANMNREDPSFRYTQDLENGQLLIQGMGIMHLQVS 498
Query: 493 XXXXXXXXXXDVELGPLQIAYREALVSSGKNTLTVDRK--------------IGGARQQL 538
LG +Q+ YRE L+ N++T+ + + L
Sbjct: 499 YERLVSEFGARASLGKVQVGYRETLIDVSFNSVTLSTENKENLIINVYLIPISDEGDETL 558
Query: 539 KVTMSARTVKGV----AQDKILRLDKTVESASNLA-HLHPRQLQA-VRQGVAAALLHGPK 592
K S ++ V +D +L E++ L HL +++Q + G+ A L HGP
Sbjct: 559 KKYFSEGEIQKVRSKGQEDGVLFYGWKPENSCTLPDHLSFQRIQENIYFGIVAGLSHGPL 618
Query: 593 LGCPVVDVQVTLHWFESGRGTSDSVVTASVAQCLRKANMSHPDTINETKAPSSG--CEPQ 650
G P+ ++Q + S+ + + Q KA + ++ + ++P S EP
Sbjct: 619 HGFPLTNLQ---SFCTISSFLSNDFPLSLLTQASMKATKNAVFSLYK-RSPKSFRILEPY 674
Query: 651 XXXXXXXXXXXXXXXXXDVVAR---VFEEADSILLEPVMSLEVVCPETHSQRVLADLSRR 707
D+V + +E I + +R L
Sbjct: 675 MDVTITTPEEYVGIVSKDLVGKRGATIKEITEIGKNAASKDSQIAIGILGERYLPADEPS 734
Query: 708 RVEVQHI-QLRQHNKVIECI---APLSEVVGYSSTLRSLSSGLATFSMQFHSHRQMAPQ 762
V+ + L Q + VI+CI PL +++ Y+S + SL+ G A F M H P+
Sbjct: 735 SVKANNASSLLQSSSVIKCIRAQVPLEQILDYNSVISSLTKGNAKFLMS-HPMESQTPK 792
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 231 bits (565), Expect = 3e-61
Identities = 145/410 (35%), Positives = 225/410 (54%), Gaps = 41/410 (10%)
Query: 1 MENIRNIGILAHIDAGKTTTTERMLFYSGTIRSMGEVHHGNTV---TDYMEQERQRGITI 57
++ IRNIGI AHID+GKTT TER+L+Y+G I+ + EV + V D+ME ER++GITI
Sbjct: 56 LKQIRNIGISAHIDSGKTTFTERVLYYTGRIKDIHEVRGKDNVGAKMDFMELEREKGITI 115
Query: 58 TSAAVTIPW------------------RGGQINLIDTPGHIDFTMEVEQSLAVLDGAVIV 99
SAA W + IN+IDTPGHIDFT+EVE++L VLDGAV+V
Sbjct: 116 QSAATHCTWERTVDQIEANEKQKTDFEKSYNINIIDTPGHIDFTIEVERALRVLDGAVLV 175
Query: 100 LDGSAGVEAQTLTVWRQAIGYRVPRILYLNKMDRNDAFVEACVNSVTEKLQATPLLLHHT 159
L +GV++QT+TV RQ Y VPRI ++NKMDR A + + KL+ +
Sbjct: 176 LCAVSGVQSQTITVDRQMRRYNVPRISFVNKMDRMGADPWKVIQQINTKLKIPAAAVQIP 235
Query: 160 VRHEGRLIGLIDLINLEEIIWTQGRGQKFTRRKLTEKDDGHKWEAAVTDHRQLVDTLSSI 219
+ E +L G++DLI + I RG K + +++++ + E A L++ L+ +
Sbjct: 236 IGQEDKLEGVVDLIQMRAIY---NRGSKGEKIEISQQVPENLIELAKEKRSALIEKLADL 292
Query: 220 DDEIAETIINNESLELSARDIDNAVRRSTIKMKAFPILCGSSYKNIGVQTLMDGVMSYLP 279
D+EIA+ + E + + + A+RR+T+ K P+L GS+ N+GVQ+++D V YLP
Sbjct: 293 DEEIADIYVMEE--DPTPEQLMGAIRRTTLARKFTPVLMGSALSNVGVQSVLDAVCDYLP 350
Query: 280 SPLEGHE-------------LYKCFGEELAGRAFKVIHDDQRGVLTFVRLYSGEMKKAQK 326
+P E L + L AFK + + + G LT++R+Y G +K+
Sbjct: 351 NPSEVENIALNAADSEKPVSLVPSSEKPLVALAFK-LEEGRFGQLTYLRIYQGTLKRGNY 409
Query: 327 IYNLGQDRSEQTGALYVALADEYRPVESVAAGNIAVVGSLKATMTGDLVT 376
IYN+ + + L +++ +E V AG I + ++ +GD T
Sbjct: 410 IYNVNSTKKIKVSRLVRMHSNDMEEIEKVEAGGICALFGIECA-SGDTFT 458
Score = 73.3 bits (172), Expect = 1e-13
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 1/171 (0%)
Query: 434 VPEPVFLCSIEPPSAMHQAALETALEQLQREDPSLRVNADDESGQIVLAGMGELHLXXXX 493
VPEPV S++P S + AL + QREDP+ RV D+ES + +++GMGELHL
Sbjct: 471 VPEPVISLSLKPKSK-DTTSFSKALNRFQREDPTFRVQLDNESKETIISGMGELHLEVYV 529
Query: 494 XXXXXXXXXDVELGPLQIAYREALVSSGKNTLTVDRKIGGARQQLKVTMSARTVKGVAQD 553
D E G ++A+RE L + ++ GGA Q KV + GV +
Sbjct: 530 ERMRREYKVDCETGKPRVAFRETLSKKVPFSYLHKKQSGGAGQYAKVEGYIEYMDGVEDE 589
Query: 554 KILRLDKTVESASNLAHLHPRQLQAVRQGVAAALLHGPKLGCPVVDVQVTL 604
+D + + + + A + AL G +G P+ + + L
Sbjct: 590 SGNVVDCEFINKVTGGTVPTQYIPACEKAFYEALKKGFLIGHPIKNCRFVL 640
Score = 55.6 bits (128), Expect = 2e-08
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 674 FEEADSILLEPVMSLEVVCPETHSQRVLADLSRRRVEVQHIQLRQHNKVIECIAPLSEVV 733
F +A+ ++LEP+M++ + P H V+ +L +R+ + + ++ PL+ +
Sbjct: 667 FLQANPMVLEPIMNVSITAPVEHQGGVIGNLDKRKATIVDSDTDEDEFTLQAEVPLNSMF 726
Query: 734 GYSSTLRSLSSGLATFSMQFHSHRQMAPQHEQ 765
YSS +R+L+ G FSM+F + AP++ Q
Sbjct: 727 SYSSDIRALTKGKGEFSMEFLKYLP-APKYVQ 757
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 97.5 bits (232), Expect = 6e-21
Identities = 59/144 (40%), Positives = 86/144 (59%), Gaps = 14/144 (9%)
Query: 2 ENIRNIGILAHIDAGKTTTTERMLFYSGTIRSMGEVHHGNTVTDYMEQERQRGITITSAA 61
ENIRN +LAH+D GKTT + +L +G I S ++ D+ E E RGIT+ S+A
Sbjct: 17 ENIRNFTLLAHVDHGKTTLADSLLASNGIISS--KLAGTVRFLDFREDEITRGITMKSSA 74
Query: 62 VTIPWR------------GGQINLIDTPGHIDFTMEVEQSLAVLDGAVIVLDGSAGVEAQ 109
+++ ++ INLID+PGH+DF+ EV + + DGA +++D GV +Q
Sbjct: 75 ISLFFKVISQNDEKRVEKDYLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEGVCSQ 134
Query: 110 TLTVWRQAIGYRVPRILYLNKMDR 133
T+TV RQA R+ IL +NKMDR
Sbjct: 135 TITVLRQAWIDRIKVILVINKMDR 158
Score = 41.1 bits (92), Expect = 6e-04
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 16/143 (11%)
Query: 436 EPVFLCSIEPPSAMHQAALETALEQLQREDPSLRVNADDESGQIVLAGMGELHLXX-XXX 494
EP+ ++EP L T L+ L + DP +++ A +E+G+ V+ GE+HL
Sbjct: 561 EPIVRVALEPVRPFEMNKLVTGLDMLNQADPCVQI-AVEENGEHVIMCAGEIHLERCLKD 619
Query: 495 XXXXXXXXDVELGPLQIAYREALVSS----GKNT------LTVDRKIGGARQQLKVTMSA 544
+++ + YRE +++ KN +T +GG + VT
Sbjct: 620 LRERFAKIEIQASQPLVPYRETTIATPDLLAKNKELSIGFVTATLPVGGVTIGITVT--- 676
Query: 545 RTVKGVAQDKILRLDKTVESASN 567
+ G D +L+ KT+E+ S+
Sbjct: 677 -PLSGSVVDFLLKHSKTIENVSS 698
Score = 33.9 bits (74), Expect = 0.086
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 305 DDQRGVLTFVRLYSGEMKKAQKIYNLGQDRSE----------QTGALYVALADEYRPVES 354
DD+ ++ F R+YSG + Q++Y G +LY+ + E +E+
Sbjct: 463 DDKDILIGFARIYSGTISVGQEVYVYGPKYDPVNPEKHITKVTVESLYLMMGQELVYLET 522
Query: 355 VAAGNIAVVGSLKATM 370
V AGN+ +G L T+
Sbjct: 523 VPAGNVFAIGGLAGTV 538
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 97.1 bits (231), Expect = 8e-21
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 4 IRNIGILAHIDAGKTTTTERMLFYSGTIRSMGEVHHGNTVTDYMEQERQRGITITSAAVT 63
+RN ++AHID GK+T ++ +L +G I E + N D +E ER+RGIT+ + +
Sbjct: 58 VRNWAVIAHIDHGKSTLSDCILKLTGVIN---EHNFRNQFLDKLEVERRRGITVKAQTCS 114
Query: 64 -IPWRGGQ---INLIDTPGHIDFTMEVEQSLAVLDGAVIVLDGSAGVEAQTLTVWRQAIG 119
I + GQ +NLIDTPGH+DF EV SLA +G ++++D S G++AQTL+ + A
Sbjct: 115 MIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQGIQAQTLSNFYMAFS 174
Query: 120 YRVPRILYLNKMDRNDAFVEACVNSVTE 147
+ I LNK+D A V+ + V +
Sbjct: 175 QNLVIIPVLNKVDLPTADVDRTLIQVQQ 202
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 95.9 bits (228), Expect = 2e-20
Identities = 57/149 (38%), Positives = 90/149 (60%), Gaps = 22/149 (14%)
Query: 3 NIRNIGILAHIDAGKTTTTERMLFYSGTIRSM--GEVHHGNTVTDYMEQERQRGITITSA 60
N+RN+ ++AH+D GK+T T+ ++ +G I + G+ +T D E++RG+TI S
Sbjct: 18 NVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRAD----EQERGVTIKST 73
Query: 61 AVTI--------------PWRGGQ--INLIDTPGHIDFTMEVEQSLAVLDGAVIVLDGSA 104
A+++ P G +NLID+PGH+DF+ EV +L V DGA++V+D
Sbjct: 74 AISLFAEMTDDDMKDMKEPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVVDTIE 133
Query: 105 GVEAQTLTVWRQAIGYRVPRILYLNKMDR 133
GV QT TV RQA+G R+ ++ +NK+DR
Sbjct: 134 GVCVQTETVLRQALGERIRPVVVVNKVDR 162
Score = 35.5 bits (78), Expect = 0.028
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 437 PVFLCSIEPPSAMHQAALETALEQLQREDPSLRVNADDESGQIVLAGMGELHLXX-XXXX 495
PV ++E + L L++L + DP + ESG+ ++AG GELHL
Sbjct: 487 PVVQVAVEVKNGNDLPKLVEGLKRLSKSDPCVLCTTS-ESGEHIVAGAGELHLEICLKDL 545
Query: 496 XXXXXXXDVELGPLQIAYREAL 517
+++ P ++YRE++
Sbjct: 546 QEDHAGIPLKISPPVVSYRESV 567
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 95.9 bits (228), Expect = 2e-20
Identities = 57/149 (38%), Positives = 90/149 (60%), Gaps = 22/149 (14%)
Query: 3 NIRNIGILAHIDAGKTTTTERMLFYSGTIRSM--GEVHHGNTVTDYMEQERQRGITITSA 60
N+RN+ ++AH+D GK+T T+ ++ +G I + G+ +T D E++RG+TI S
Sbjct: 18 NVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRAD----EQERGVTIKST 73
Query: 61 AVTI--------------PWRGGQ--INLIDTPGHIDFTMEVEQSLAVLDGAVIVLDGSA 104
A+++ P G +NLID+PGH+DF+ EV +L V DGA++V+D
Sbjct: 74 AISLFAEMTDDDMKDMKEPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVVDTIE 133
Query: 105 GVEAQTLTVWRQAIGYRVPRILYLNKMDR 133
GV QT TV RQA+G R+ ++ +NK+DR
Sbjct: 134 GVCVQTETVLRQALGERIRPVVVVNKVDR 162
Score = 35.5 bits (78), Expect = 0.028
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 437 PVFLCSIEPPSAMHQAALETALEQLQREDPSLRVNADDESGQIVLAGMGELHLXX-XXXX 495
PV ++E + L L++L + DP + ESG+ ++AG GELHL
Sbjct: 487 PVVQVAVEVKNGNDLPKLVEGLKRLSKSDPCVLCTTS-ESGEHIVAGAGELHLEICLKDL 545
Query: 496 XXXXXXXDVELGPLQIAYREAL 517
+++ P ++YRE++
Sbjct: 546 QEDHAGIPLKISPPVVSYRESV 567
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 72.1 bits (169), Expect = 3e-13
Identities = 42/136 (30%), Positives = 71/136 (52%), Gaps = 4/136 (2%)
Query: 2 ENIRNIGILAHIDAGKTTTTERMLFYSGTIRSMGEVHHGN-TVTDYMEQERQRGITITSA 60
+++R+ + H+ GK+ + +++Y+ + T T Y+E+ER I T
Sbjct: 138 DDVRSFIVAGHLHHGKSALLDLLVYYTHPDTKPPKRRSLRYTDTHYLERERVMSIKSTPL 197
Query: 61 AVTIPWRGGQ---INLIDTPGHIDFTMEVEQSLAVLDGAVIVLDGSAGVEAQTLTVWRQA 117
+ + G+ IDTPGH+DF EV +A+ DG V+V+D GV T + + A
Sbjct: 198 TLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVVDVIEGVMINTTRIIKHA 257
Query: 118 IGYRVPRILYLNKMDR 133
I + +P +L LNK+DR
Sbjct: 258 ILHDMPIVLVLNKVDR 273
Score = 31.5 bits (68), Expect = 0.46
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 306 DQRGVLTFVRLYSGEMKKAQKIYNLGQDRS 335
D F R+YSG++KK QK+ LG++ S
Sbjct: 499 DANNFYAFARVYSGQVKKGQKVKVLGENYS 528
Score = 31.1 bits (67), Expect = 0.61
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Query: 674 FEEADSILLEPVMSLEVVCPETHSQRVLADLSRRRVEVQHIQLRQHNK--VIECIAPLSE 731
F A L+EPV +EV P + L+RRR V R + ++ + P+ +
Sbjct: 833 FLTASPRLMEPVYMVEVHAPADSLPIIYDLLTRRRGHVLQDIPRPGSPLYLVRALIPVID 892
Query: 732 VVGYSSTLRSLSSGLATFSMQFHSHRQMAP 761
G+ + LR + G A M F H Q+ P
Sbjct: 893 SCGFETDLRVHTQGQAMCQMVF-DHWQVVP 921
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 64.5 bits (150), Expect = 5e-11
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 9/131 (6%)
Query: 6 NIGILAHIDAGKTTTTERMLFYSGTIRSMGEVHHGN-TVTDYMEQERQRGITITSAAVTI 64
NIG + H+D GKTT T + + + +G+ + + D +E+ RGITI+SA V
Sbjct: 55 NIGTIGHVDHGKTTLTAAI---TKCLSDLGQASFMDYSQIDKAPEEKARGITISSAHVEY 111
Query: 65 PWRGGQINLIDTPGHIDFTMEVEQSLAVLDGAVIVLDGSAGVEAQT---LTVWRQAIGYR 121
+D PGH D+ + A +DGA+IV+ + G QT L + RQ +G +
Sbjct: 112 ETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMPQTREHLLLARQ-VGVK 170
Query: 122 VPRILYLNKMD 132
++Y+NK+D
Sbjct: 171 -QIVVYINKVD 180
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 54.4 bits (125), Expect = 6e-08
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 13/113 (11%)
Query: 6 NIGILAHIDAGKTTTTERMLFYSGTI---------RSMGEVHHGNT----VTDYMEQERQ 52
N+ ++ H+D+GK+TTT +++ G I + E+ G+ V D ++ ER+
Sbjct: 9 NVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERE 68
Query: 53 RGITITSAAVTIPWRGGQINLIDTPGHIDFTMEVEQSLAVLDGAVIVLDGSAG 105
RGITI A + +ID PGH DF + + D AV+++ G G
Sbjct: 69 RGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTG 121
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 54.0 bits (124), Expect = 8e-08
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 13/113 (11%)
Query: 6 NIGILAHIDAGKTTTTERMLFYSGTI---------RSMGEVHHGNT----VTDYMEQERQ 52
N+ ++ H+D+GK+TTT +++ G I + E+ G+ V D ++ ER+
Sbjct: 9 NVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERE 68
Query: 53 RGITITSAAVTIPWRGGQINLIDTPGHIDFTMEVEQSLAVLDGAVIVLDGSAG 105
RGITI A + +ID PGH DF + + D A++++ G G
Sbjct: 69 RGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTG 121
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 54.0 bits (124), Expect = 8e-08
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 13/113 (11%)
Query: 6 NIGILAHIDAGKTTTTERMLFYSGTI---------RSMGEVHHGNT----VTDYMEQERQ 52
N+ ++ H+D+GK+TTT +++ G I + E+ G+ V D ++ ER+
Sbjct: 9 NVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERE 68
Query: 53 RGITITSAAVTIPWRGGQINLIDTPGHIDFTMEVEQSLAVLDGAVIVLDGSAG 105
RGITI A + +ID PGH DF + + D A++++ G G
Sbjct: 69 RGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTG 121
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 50.8 bits (116), Expect = 7e-07
Identities = 40/129 (31%), Positives = 59/129 (45%), Gaps = 20/129 (15%)
Query: 7 IGILAHIDAGKTTTTERMLFYSGTIRSMGEVHHGNTVTDYMEQERQRGITITSAAVTIPW 66
+ ++ H+D GKTT + F TI S HG GIT A T+P+
Sbjct: 174 VTLMGHVDHGKTTLLD--AFRKSTIAS---TEHG-------------GITQKIGAFTVPF 215
Query: 67 RGGQ--INLIDTPGHIDFTMEVEQSLAVLDGAVIVLDGSAGVEAQTLTVWRQAIGYRVPR 124
G I +DTPGH+ F ++ + D V+V+ G GV+ QT+ + VP
Sbjct: 216 DKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDGVKPQTVEAIKHIQSADVPV 275
Query: 125 ILYLNKMDR 133
++ L K DR
Sbjct: 276 VVALTKSDR 284
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 49.6 bits (113), Expect = 2e-06
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 13/108 (12%)
Query: 9 ILAHIDAGKTTTTERMLFYSGTI--RSMGEVHH--GNT---------VTDYMEQERQRGI 55
+ H+D+GK+T R++F G I RSM ++H+ N+ + D E+ER RG+
Sbjct: 182 VTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEERARGV 241
Query: 56 TITSAAVTIPWRGGQINLIDTPGHIDFTMEVEQSLAVLDGAVIVLDGS 103
T+ A+ T + D PGH DF + + D AV+V+D S
Sbjct: 242 TMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSS 289
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 49.2 bits (112), Expect = 2e-06
Identities = 31/125 (24%), Positives = 59/125 (47%)
Query: 9 ILAHIDAGKTTTTERMLFYSGTIRSMGEVHHGNTVTDYMEQERQRGITITSAAVTIPWRG 68
IL H+D GKT + + + G + T + + ++ + + + +
Sbjct: 489 ILGHVDTGKTKLLDNLRRSNVQEGEAGGITQQIGATYFPIESIKQKTKVVNKKGKLQYNI 548
Query: 69 GQINLIDTPGHIDFTMEVEQSLAVLDGAVIVLDGSAGVEAQTLTVWRQAIGYRVPRILYL 128
+ +IDTPGH FT + ++ + A++V+D G+E QT+ R + P ++ L
Sbjct: 549 PGLLIIDTPGHESFTNLRSRGTSLCNIAILVIDIMHGLEPQTIESIRLLRDQKTPFVVAL 608
Query: 129 NKMDR 133
NK+DR
Sbjct: 609 NKVDR 613
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 13/113 (11%)
Query: 6 NIGILAHIDAGKTTTTERMLFYSGTI--RSMGEVHHG-----------NTVTDYMEQERQ 52
NI + H+DAGK+T +LF +G + R+M ++ + D +ER+
Sbjct: 240 NIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEERE 299
Query: 53 RGITITSAAVTIPWRGGQINLIDTPGHIDFTMEVEQSLAVLDGAVIVLDGSAG 105
+G T+ + +L+D PGH + + + D V+V+ G
Sbjct: 300 KGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRG 352
>SPBPB2B2.11 |||nucleotide-sugar 4,6-dehydratase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 365
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 142 VNSVTEKLQATPLLLHHTVRHEGRLIGLIDLINLEEIIWTQGRGQKFTRRKLTEKDDGHK 201
+N ++K+ + LH H+ + + + D IN +++W + +G + L K G
Sbjct: 226 INQKSQKIMQDKITLHGDGLHKRKYLHIYDFINAIDLVWMK-QGSEVYHSTLESKMSGQI 284
Query: 202 WEAAVTDHRQLVDTLSSI 219
+ D +D LS +
Sbjct: 285 FNIGSDDE---IDNLSLV 299
>SPAC16A10.02 |||transcription coactivator Sub1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 136
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 206 VTDHRQLVDTLSSIDDEIAETIINNESLELSARDIDNAVRRST 248
V D LVD+ S +DEI E NN SL+ D++ T
Sbjct: 87 VDDSLGLVDSGSDSEDEIKEKAENNASLKNDEDDLNTKTENKT 129
>SPAC17H9.20 |psc3|SPAC607.01|mitotic cohesin complex, non-SMC
subunit Psc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/20 (50%), Positives = 16/20 (80%)
Query: 142 VNSVTEKLQATPLLLHHTVR 161
+NS+TE+ A+P LLH ++R
Sbjct: 615 INSITERNSASPTLLHDSLR 634
>SPBC29A10.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 295
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 198 DGHKWEAAVTDHRQLVDTLSSIDDEIAETIINNESLELSAR 238
D K+E A+ +H L D L + D+I ET+ +NE + R
Sbjct: 124 DRLKFEEAI-NHLLLPDVLPNFPDKIIETLYSNEKYKFLIR 163
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.132 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,887,219
Number of Sequences: 5004
Number of extensions: 107427
Number of successful extensions: 371
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 312
Number of HSP's gapped (non-prelim): 41
length of query: 774
length of database: 2,362,478
effective HSP length: 78
effective length of query: 696
effective length of database: 1,972,166
effective search space: 1372627536
effective search space used: 1372627536
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
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