GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000765-TA|BGIBMGA000765-PA|IPR000795|Protein synthesis
factor, GTP-binding, IPR005225|Small GTP-binding protein domain,
IPR009022|Elongation factor G, III and V, IPR009000|Translation
factor, IPR004161|Elongation factor Tu, domain 2, IPR000640|Elongation
factor G, C-terminal
         (774 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    27   1.9  
AY045760-1|AAK84942.1|  165|Anopheles gambiae D7-related 1 prote...    27   1.9  
AJ133852-1|CAB39727.1|  165|Anopheles gambiae D7-related 1 prote...    27   1.9  
AY045760-4|AAK84945.1|  165|Anopheles gambiae D7-related 4 prote...    27   2.5  
AJ302659-1|CAC35524.1|  165|Anopheles gambiae D7r4 protein protein.    27   2.5  

>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 27.1 bits (57), Expect = 1.9
 Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 300 FKVIHDDQRGVLTFVRLYSGEMKKAQKIYNLGQDRSEQTGALYVALADEYRPVESVAA 357
           FK   + ++     +RL   E+++ Q IY++   R E    L++ L  +++P + V+A
Sbjct: 106 FKAALESEQDAHRSLRLVP-ELQRKQLIYSIEAGRLEDAHILHMTLKGQWKPDQIVSA 162


>AY045760-1|AAK84942.1|  165|Anopheles gambiae D7-related 1 protein
           protein.
          Length = 165

 Score = 27.1 bits (57), Expect = 1.9
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 273 GVMSYLPSPLEGHELYKCFGEELAGRAFKVIHD 305
           G   +LP     +  YKC  E  +G AFK + D
Sbjct: 100 GQTQHLPVGKRANAYYKCLVESTSGDAFKKVFD 132


>AJ133852-1|CAB39727.1|  165|Anopheles gambiae D7-related 1 protein
           protein.
          Length = 165

 Score = 27.1 bits (57), Expect = 1.9
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 273 GVMSYLPSPLEGHELYKCFGEELAGRAFKVIHD 305
           G   +LP     +  YKC  E  +G AFK + D
Sbjct: 100 GQTQHLPVGKRANAYYKCLVESTSGDAFKKVFD 132


>AY045760-4|AAK84945.1|  165|Anopheles gambiae D7-related 4 protein
           protein.
          Length = 165

 Score = 26.6 bits (56), Expect = 2.5
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 278 LPSPLEGHELYKCFGEELAGRAFKVIHD 305
           +P+    H  YKC  +   GR FK + D
Sbjct: 105 VPTSERAHVFYKCLLKSTTGRTFKKVFD 132


>AJ302659-1|CAC35524.1|  165|Anopheles gambiae D7r4 protein protein.
          Length = 165

 Score = 26.6 bits (56), Expect = 2.5
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 278 LPSPLEGHELYKCFGEELAGRAFKVIHD 305
           +P+    H  YKC  +   GR FK + D
Sbjct: 105 VPTSERAHVFYKCLLKSTTGRTFKKVFD 132


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.132    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,138
Number of Sequences: 2123
Number of extensions: 24835
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 19
Number of HSP's gapped (non-prelim): 5
length of query: 774
length of database: 516,269
effective HSP length: 69
effective length of query: 705
effective length of database: 369,782
effective search space: 260696310
effective search space used: 260696310
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 51 (24.6 bits)