Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000765-TA|BGIBMGA000765-PA|IPR000795|Protein synthesis
factor, GTP-binding, IPR005225|Small GTP-binding protein domain,
IPR009022|Elongation factor G, III and V, IPR009000|Translation
factor, IPR004161|Elongation factor Tu, domain 2, IPR000640|Elongation
factor G, C-terminal
(774 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 52 2e-08
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 52 2e-08
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 47 7e-07
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 40 8e-05
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 27 0.44
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 25 2.3
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 24 5.4
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 24 5.4
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 7.1
AJ876408-1|CAI45289.1| 52|Apis mellifera putative diuretic hor... 23 7.1
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 52.0 bits (119), Expect = 2e-08
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 13/113 (11%)
Query: 6 NIGILAHIDAGKTTTTERMLFYSGTI---------RSMGEVHHGNT----VTDYMEQERQ 52
NI ++ H+D+GK+TTT +++ G I + E+ G+ V D ++ ER+
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 53 RGITITSAAVTIPWRGGQINLIDTPGHIDFTMEVEQSLAVLDGAVIVLDGSAG 105
RGITI A + +ID PGH DF + + D AV+++ G
Sbjct: 69 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 121
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 51.6 bits (118), Expect = 2e-08
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 13/113 (11%)
Query: 6 NIGILAHIDAGKTTTTERMLFYSGTI---------RSMGEVHHGNT----VTDYMEQERQ 52
NI ++ H+D+GK+TTT +++ G I + E+ G+ V D ++ ER+
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 53 RGITITSAAVTIPWRGGQINLIDTPGHIDFTMEVEQSLAVLDGAVIVLDGSAG 105
RGITI A + +ID PGH DF + + D AV+++ G
Sbjct: 69 RGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIG 121
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 46.8 bits (106), Expect = 7e-07
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
Query: 34 MGEVHHGNTV------TDYMEQERQRGITITSAAVTIPWRGGQ-INLIDTPGHIDFTMEV 86
MG V HG T + + GIT A + G+ + +DTPGH F
Sbjct: 151 MGHVDHGKTTLLDALRNTSIAKSEFGGITQCIGAFDVTLESGERVTFLDTPGHAAFISMR 210
Query: 87 EQSLAVLDGAVIVLDGSAGVEAQTLTVWRQAIGYRVPRILYLNKMDR 133
+ + D V+V+ GV+ QTL A +VP I+ +NK+D+
Sbjct: 211 HRGAHITDIVVLVVAADDGVKEQTLQSIEMAKDAKVPIIVAINKIDK 257
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 39.9 bits (89), Expect = 8e-05
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 43 VTDYMEQERQRGITITSAAVTIPWRGGQINLIDTPGHIDFTMEVEQSLAVLDGAVIVLDG 102
V D ++ ER+RGITI A + +ID PGH DF + + D AV+++
Sbjct: 2 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 61
Query: 103 SAG 105
G
Sbjct: 62 GTG 64
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 27.5 bits (58), Expect = 0.44
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 71 INLIDTPGHIDFTMEVEQSLAVLDGAVIVLDGSAG 105
+ +ID PGH DF + + D AV+++ G
Sbjct: 14 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 48
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 25.0 bits (52), Expect = 2.3
Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Query: 571 LHPRQLQAVRQGVAAALLHG 590
LHPR+L+AV G +A +HG
Sbjct: 428 LHPRELEAVNLG-SACRIHG 446
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 23.8 bits (49), Expect = 5.4
Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 169 LIDLINLEEIIWTQGRGQKFTRRKLTEKDDGHKWEAAVTDHRQLVDTLSSI 219
L+D+ ++II R + + R + + + + H QL+DTL ++
Sbjct: 326 LVDMCE-QDIIQNDRRTRHLSDRVVALEAEKKNLSKVIDQHSQLIDTLENV 375
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 23.8 bits (49), Expect = 5.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 125 ILYLNKMDRNDAFVEACVNSVT 146
+LY +KMD N F +A V ++T
Sbjct: 233 LLYASKMDANVIFQDAAVMNMT 254
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 23.4 bits (48), Expect = 7.1
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 6 NIGILAHIDAGKTTTTERMLFYSGTIRSMGEVHHGNTV-TDYMEQERQRG 54
NIG + H+ GK+T + + T+R E+ T+ D ++ RG
Sbjct: 44 NIGTIGHVAHGKSTIVKAISGVQ-TVRFKNELERNITIKLDTRAEDSTRG 92
>AJ876408-1|CAI45289.1| 52|Apis mellifera putative diuretic
hormone-I protein.
Length = 52
Score = 23.4 bits (48), Expect = 7.1
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 698 QRVLADLSRRRVEVQHIQLRQHNKVIECI 726
QRVL +L+RR+ Q+ + +++E I
Sbjct: 22 QRVLLELARRKALQDQAQIDANRRLLETI 50
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.317 0.132 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,480
Number of Sequences: 429
Number of extensions: 6291
Number of successful extensions: 27
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 11
length of query: 774
length of database: 140,377
effective HSP length: 63
effective length of query: 711
effective length of database: 113,350
effective search space: 80591850
effective search space used: 80591850
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)
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