Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000763-TA|BGIBMGA000763-PA|undefined
(105 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0926 + 12448032-12448231,12448727-12448815,12449956-124500... 33 0.033
02_05_0827 - 32051086-32051445 33 0.033
05_06_0166 + 26093618-26095381,26095820-26096039,26096345-260966... 29 0.54
08_02_0292 - 15420378-15421229 27 2.9
06_01_0275 + 2029542-2029689,2029777-2030295,2030657-2030754,203... 27 2.9
03_02_0075 - 5449313-5449619,5449702-5449730 27 2.9
02_02_0413 - 9960271-9960954 27 2.9
02_02_0408 + 9901892-9902004,9903777-9903862,9905019-9905129,990... 27 2.9
01_06_0856 - 32503824-32505014 27 2.9
09_02_0449 - 9461385-9461431,9461487-9461628,9461733-9461831,946... 27 3.8
04_04_1040 - 30325669-30325728,30325837-30326454,30326566-30326895 27 3.8
04_01_0486 - 6404315-6404333,6404803-6405260 27 3.8
04_01_0099 + 1029785-1030039,1030269-1030357,1030484-1030541,103... 27 3.8
02_04_0169 + 20554715-20555083,20555150-20555632,20557926-205580... 27 3.8
11_02_0020 + 7429898-7430131,7432565-7432669,7434535-7434621,743... 26 5.0
09_02_0626 + 11352690-11353078,11353106-11354006 26 5.0
06_01_0859 - 6506029-6506133,6506255-6506319,6506461-6506539,650... 26 5.0
02_05_0815 - 31977721-31977813,31978078-31978482,31978843-31979349 26 5.0
02_01_0278 - 1851338-1851412,1851579-1851819,1851946-1852047,185... 26 5.0
09_03_0058 + 11950668-11950701,11951068-11951106,11951586-119519... 26 6.6
06_03_0883 + 25644786-25645394 26 6.6
05_02_0012 - 5575574-5575849,5575889-5575954,5576103-5576926,557... 26 6.6
04_03_0823 - 20073972-20074343,20074432-20074657,20074753-20075126 26 6.6
12_01_0307 - 2312816-2313133,2313920-2313967,2314337-2314393,231... 25 8.8
11_06_0693 - 26334574-26336121 25 8.8
11_01_0532 + 4201374-4201401,4201475-4202652,4204316-4204670,420... 25 8.8
10_08_0746 - 20266701-20266709,20266935-20267063,20267791-20268582 25 8.8
07_03_0115 - 13574601-13574645,13574710-13574781,13575990-13576469 25 8.8
06_01_1104 + 9097108-9097779 25 8.8
04_04_0232 + 23794109-23794399,23795290-23796621 25 8.8
04_03_0502 - 16604289-16605374,16605546-16605716,16607044-16607337 25 8.8
03_06_0581 + 34886728-34886817,34886990-34887175,34887332-348875... 25 8.8
03_05_0197 + 21884415-21885332,21886130-21886750 25 8.8
02_01_0362 + 2607097-2607371,2607766-2608612,2608842-2608910,260... 25 8.8
02_01_0172 - 1187408-1187851 25 8.8
>03_02_0926 +
12448032-12448231,12448727-12448815,12449956-12450096,
12450181-12450283,12450386-12450481,12450580-12450654,
12450754-12450823,12451028-12451111
Length = 285
Score = 33.5 bits (73), Expect = 0.033
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 44 AHLRVLGPSGLAGRLQQPAGL-LVPAARRVPAAMLGIPAATGSSLVEIPTALPRNNV 99
A+ R+LG G+ G + + AG LV A R+VP G+ TG + + LP + V
Sbjct: 131 ANERMLGGGGVDGAIHRTAGPELVEACRKVPEVKSGVRCPTGEARITPAFKLPVSRV 187
>02_05_0827 - 32051086-32051445
Length = 119
Score = 33.5 bits (73), Expect = 0.033
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 14 ATGRSSRAGEGRQAVRG-GRVVLAGAQPLRHAHLRVLGPSGLAGRLQQ--PAGLLVPAAR 70
AT ++ G GR+ + G ++AG +P A + V+ P GL + + A P
Sbjct: 29 ATSKAGACGAGRRRLMAAGMAMVAGTEPAAGAKVVVVVPCGLVVAMTRCPAAAARCPPDP 88
Query: 71 RVPAAMLGIPAATGSSLVEIP 91
R+ A G PAA G P
Sbjct: 89 RLSAGFGGWPAAVGGEASRPP 109
>05_06_0166 +
26093618-26095381,26095820-26096039,26096345-26096674,
26097481-26098029,26098366-26098426,26099737-26099824,
26100240-26100299
Length = 1023
Score = 29.5 bits (63), Expect = 0.54
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
Query: 6 LPAVVIVAATGRSSRAGEGRQAVRG--GRVVLAGAQPLRHAHLRVLGP-SGLAGRLQQPA 62
+PA AA G S G G G L LRH H LG S +GR + P
Sbjct: 1 MPAPAATAAAGMGSGGGGGGSGEHHMRGHAHLTNCIHLRHHHAHGLGAGSASSGRRRSPT 60
Query: 63 GLLVPAARRVPAAMLGI 79
G A+ + +L +
Sbjct: 61 GSSASASAALMRDLLAL 77
>08_02_0292 - 15420378-15421229
Length = 283
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 20 RAGEGRQAVRGGRVVLAGAQPLRHAHLRVLGPSGLAGRLQQPAGLLVP 67
+A EGR AV R AGA + + +GP+ G + +G +P
Sbjct: 221 QAEEGRAAVAAPRRSRAGADAVLSVEVGWIGPADFGGPFRPGSGRNIP 268
>06_01_0275 +
2029542-2029689,2029777-2030295,2030657-2030754,
2031718-2032028,2032560-2032631,2032729-2033398
Length = 605
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 4 NVLPAVVIVAATGRSSRAGEGRQ 26
N++P V TGRSS G+G+Q
Sbjct: 408 NIIPLETAVQETGRSSDEGKGKQ 430
>03_02_0075 - 5449313-5449619,5449702-5449730
Length = 111
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 65 LVPAARRVPAAMLGIPAATGSSLVEIPTALP 95
+ PA VPAA+ +PA +++ +PT P
Sbjct: 74 IAPAPAVVPAAIAPVPADVPAAIAPVPTDAP 104
>02_02_0413 - 9960271-9960954
Length = 227
Score = 27.1 bits (57), Expect = 2.9
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
Query: 9 VVIVAATGRSSRAGE---GRQAVRGGRVVLAGAQPLRHAHLRVLGPSGLAGRLQQPAGLL 65
VV+V A G E G++ G RV P H+ GPS LAG P+ L
Sbjct: 120 VVVVVARGEEVEEEEVKRGKKWCAGMRVPWVEEGP----HMLYAGPSFLAGAAPDPSSLP 175
Query: 66 VPA 68
+P+
Sbjct: 176 IPS 178
>02_02_0408 +
9901892-9902004,9903777-9903862,9905019-9905129,
9905182-9905307,9905546-9905673,9906634-9906726,
9907873-9908059,9908877-9909637
Length = 534
Score = 27.1 bits (57), Expect = 2.9
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
Query: 9 VVIVAATGRSSRAGE---GRQAVRGGRVVLAGAQPLRHAHLRVLGPSGLAGRLQQPAGLL 65
VV+V A G E G++ G RV P H+ GPS LAG P+ L
Sbjct: 427 VVVVVARGEEVEEEEVKRGKKWCAGMRVPWVEEGP----HMLYAGPSFLAGAAPDPSSLP 482
Query: 66 VPA 68
+P+
Sbjct: 483 IPS 485
>01_06_0856 - 32503824-32505014
Length = 396
Score = 27.1 bits (57), Expect = 2.9
Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Query: 18 SSRAGEGRQAVRGGRVVLAGAQPLRHAHLRVLGPSGLAGRLQQPAGLLVPAARRVPAAML 77
S+ + + A GG G L H VLG G+ +Q +L PAA V
Sbjct: 73 SAGSAQAAAAAEGGPPAARGRGALAHLARLVLG--GIVRPIQALGQILSPAAATVSRRSA 130
Query: 78 GIPAATGSSLVEI 90
PAA + ++
Sbjct: 131 APPAAPAPAAADV 143
>09_02_0449 -
9461385-9461431,9461487-9461628,9461733-9461831,
9462052-9462100,9462179-9462212,9462880-9463055,
9463094-9463532,9463784-9463971,9463988-9464496
Length = 560
Score = 26.6 bits (56), Expect = 3.8
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 73 PAAMLGIPAATGSSLV--EIPTALPRNNVQGGDVF 105
P + LG+PAA S+ + IP LP GGD +
Sbjct: 317 PCSCLGLPAAPASTFLAGAIPYPLPLPRGGGGDTY 351
>04_04_1040 -
30325669-30325728,30325837-30326454,30326566-30326895
Length = 335
Score = 26.6 bits (56), Expect = 3.8
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 35 LAGAQPLRHAHLRVLGPSGLAGRLQQPAGLLVPAARRVPAAMLGIPAATGSSLVE 89
+AGA LRH R+ + L A ++PAA R+ A + ++ G+ + E
Sbjct: 5 MAGATLLRHLGPRLFAAEPVYSGLAASARGVMPAAARIFPARMASTSSAGADVKE 59
>04_01_0486 - 6404315-6404333,6404803-6405260
Length = 158
Score = 26.6 bits (56), Expect = 3.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 17 RSSRAGEGRQAVRGGRVVLAGAQPLRHAHLRVLGPSG 53
R+++ G GRQ RGG V + P R LR + G
Sbjct: 67 RAAQGGGGRQRARGGGEVAVVSPPGRSPPLRQIWQEG 103
>04_01_0099 +
1029785-1030039,1030269-1030357,1030484-1030541,
1030643-1030960,1031043-1031165,1031698-1031901,
1031982-1032041
Length = 368
Score = 26.6 bits (56), Expect = 3.8
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 26 QAVRGGRVVLAGAQPLRHAHLRVLGPSGLAGRL 58
Q + G++ + L+H H++ +GP G+ G +
Sbjct: 263 QMLANGQLRFRTKEQLQHEHVKRIGPRGMVGEI 295
>02_04_0169 +
20554715-20555083,20555150-20555632,20557926-20558003,
20558141-20558143
Length = 310
Score = 26.6 bits (56), Expect = 3.8
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 2 SGN---VLPAVVIVAATGRSSRAGEGRQAVRGGRVVLAGAQPLRHAHLRVLGPSGLAGRL 58
SGN +LPA+ A G+ AG G +G +A A +A G G GR
Sbjct: 31 SGNNQLLLPAIAASADKGKGVVAGTGNVDAKGKTTAMAPAASSTNAPNNQGGGGGGGGRS 90
Query: 59 QQPAGLLVPAARR 71
++ + RR
Sbjct: 91 RERMHIFAERERR 103
>11_02_0020 +
7429898-7430131,7432565-7432669,7434535-7434621,
7435188-7435241,7435338-7435483,7435593-7435719,
7436200-7436208
Length = 253
Score = 26.2 bits (55), Expect = 5.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 59 QQPAGLLVPAARRVPAAMLGIPAATGS 85
++ AGL P A P ++ G+P TGS
Sbjct: 4 KKDAGLSPPVAAPPPLSLAGVPVLTGS 30
>09_02_0626 + 11352690-11353078,11353106-11354006
Length = 429
Score = 26.2 bits (55), Expect = 5.0
Identities = 23/72 (31%), Positives = 27/72 (37%), Gaps = 3/72 (4%)
Query: 13 AATGRSSRAGEGRQAVRGGRVVLAGAQPLRHAHLRVLGP---SGLAGRLQQPAGLLVPAA 69
A GR +R E +A R A R L GP +GLAG L + L
Sbjct: 208 AVAGREARHLESARAERAAIAARASELEAREKDLAAGGPPGGAGLAGELAKAQSTLADLE 267
Query: 70 RRVPAAMLGIPA 81
R V GI A
Sbjct: 268 RLVQDQAGGIAA 279
>06_01_0859 -
6506029-6506133,6506255-6506319,6506461-6506539,
6506764-6506893,6507231-6507396,6507515-6507569,
6507693-6507739,6508416-6508614
Length = 281
Score = 26.2 bits (55), Expect = 5.0
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 13 AATGRSSRAGEGRQAVRGGRVVLAGAQPLRHAHLRVLGPSGLA 55
AA G + G GR RG V+ G +P A LRV GP+G A
Sbjct: 13 AAVGVGAGPGVGR---RGRAVIRVGKRPTA-ASLRVGGPAGPA 51
>02_05_0815 - 31977721-31977813,31978078-31978482,31978843-31979349
Length = 334
Score = 26.2 bits (55), Expect = 5.0
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 14 ATGRSSRAGEGRQAVRGGRVVLAGAQPLRHAHLRVLGP 51
A G + GEG R G + A HA++RVL P
Sbjct: 227 AAGSGAADGEGGCGARPGAADIEVAMAESHANVRVLAP 264
>02_01_0278 -
1851338-1851412,1851579-1851819,1851946-1852047,
1852291-1852364,1852455-1852592,1852848-1853003,
1853364-1853513,1853808-1853867,1853946-1854073,
1854209-1854617,1855571-1855628,1856435-1856493,
1857478-1857606,1857765-1857774,1858134-1858183,
1858633-1858854
Length = 686
Score = 26.2 bits (55), Expect = 5.0
Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 29 RGGRVVLAGAQPLRHAHLRVLGPSGLAGRLQQPAGLLVPAARRVPA 74
R GR A QPLR + L P G G P +PAA RVPA
Sbjct: 17 RRGRTASA-YQPLRSSSL-ARHPGGDGGLEVVPGPFALPAAIRVPA 60
>09_03_0058 +
11950668-11950701,11951068-11951106,11951586-11951982,
11952016-11952314,11953743-11956795
Length = 1273
Score = 25.8 bits (54), Expect = 6.6
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 1 MSGNVLPAVVIVAATGRSSRAGEGRQAVRGGRVVLAGAQPLRHAHLRVLGP--SGLAGRL 58
+SG +P + ATG + G+ V GG VV GA R H+ +L S +
Sbjct: 181 LSGAFMPPPSLANATGLKALLAGGQGQVIGGNVV--GALRAR-GHVTILAAVVSNVTYEC 237
Query: 59 QQPAGLLVPAARRVPAAM 76
P +V +VPAA+
Sbjct: 238 LSPEHDVVDDPGKVPAAV 255
>06_03_0883 + 25644786-25645394
Length = 202
Score = 25.8 bits (54), Expect = 6.6
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 41 LRHAHLRVLGPSGLAGRLQQPAGLLVPAARRVPAAMLGIPAATGSSLVEIPTALPRN 97
LR+ HL + A RL PA LL+P P +LG G+ ++ A+ R+
Sbjct: 38 LRYLHLVIKE----ASRLHPPAPLLLPRECSEPCQVLGYDVPRGTQVLVNAWAIGRD 90
>05_02_0012 -
5575574-5575849,5575889-5575954,5576103-5576926,
5577333-5577405,5577936-5577983
Length = 428
Score = 25.8 bits (54), Expect = 6.6
Identities = 14/27 (51%), Positives = 15/27 (55%)
Query: 22 GEGRQAVRGGRVVLAGAQPLRHAHLRV 48
G+G RGGR AG Q L HA L V
Sbjct: 399 GDGGDEGRGGRRGGAGVQQLGHARLGV 425
>04_03_0823 - 20073972-20074343,20074432-20074657,20074753-20075126
Length = 323
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 53 GLAGRLQQPAGLLVPAARRVPAAMLGIPAA 82
GL G + LL P AR++ A +LG+ +A
Sbjct: 182 GLTGYVGANPRLLTPQARKLVAGLLGVESA 211
>12_01_0307 -
2312816-2313133,2313920-2313967,2314337-2314393,
2315749-2315822,2316116-2316285,2316415-2316509
Length = 253
Score = 25.4 bits (53), Expect = 8.8
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 3 GNVLPAVVIVAATGRSSRAGEGRQAVRGGR 32
G P V V G + GEGR+ VRG R
Sbjct: 159 GEETPTVPEVERAGATDGDGEGRENVRGRR 188
>11_06_0693 - 26334574-26336121
Length = 515
Score = 25.4 bits (53), Expect = 8.8
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 2 SGNVLPAVVIVAATGRSSRAGEGRQAVRGGRVVLAGAQPL 41
SGN + + A TGR AG+ R+ +R V A Q L
Sbjct: 465 SGNYVLLANLYAETGRWEEAGDARRLMRRMSVQKAPGQSL 504
>11_01_0532 +
4201374-4201401,4201475-4202652,4204316-4204670,
4204791-4204864,4206965-4207056,4207500-4207573,
4207680-4207822,4207889-4207909
Length = 654
Score = 25.4 bits (53), Expect = 8.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 7 PAVVIVAATGRSSRAGEGRQAVRGGRVV 34
P+V+ V A RS+ AGEG AV V+
Sbjct: 105 PSVLAVIAAERSACAGEGSAAVAAAPVL 132
>10_08_0746 - 20266701-20266709,20266935-20267063,20267791-20268582
Length = 309
Score = 25.4 bits (53), Expect = 8.8
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
Query: 7 PAVVIVAATGRSSRAGEG----------RQAVRGGRVVLAGAQPLRHAHLRVLGPSGLAG 56
PA VI A+ R + AG G R +R R ++ + +R LRVL P G
Sbjct: 158 PASVITTASSRRAGAGSGKARAPLLATRRILLRYLRFLVPLCRKVRSLPLRVLSPRSAKG 217
Query: 57 RLQQPAGLLVPAAR 70
L + PA R
Sbjct: 218 SLAAASSSASPARR 231
>07_03_0115 - 13574601-13574645,13574710-13574781,13575990-13576469
Length = 198
Score = 25.4 bits (53), Expect = 8.8
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Query: 8 AVVIVAATGRSSRAGEGRQAVRGGRVVLAGAQPLRHAHLRVLGPSGLAGR 57
A V A R AG G V GG G P R H SG A R
Sbjct: 76 AATAVEAGARGGEAGSGAGRVPGGVAGDGGGWPAREGH-PATAESGAARR 124
>06_01_1104 + 9097108-9097779
Length = 223
Score = 25.4 bits (53), Expect = 8.8
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 23 EGRQAVRGGRVVLAGAQPLRHAHLRVLGPSGLAGRLQQPAGLLVP 67
EGR AV R AGA + + +GP+ G + +G +P
Sbjct: 164 EGRAAVAAPRRSRAGADAVFSVEVGWIGPADFGGPFRPGSGRNIP 208
>04_04_0232 + 23794109-23794399,23795290-23796621
Length = 540
Score = 25.4 bits (53), Expect = 8.8
Identities = 10/16 (62%), Positives = 13/16 (81%)
Query: 22 GEGRQAVRGGRVVLAG 37
GE R+A RGG ++LAG
Sbjct: 56 GEAREAARGGPLLLAG 71
>04_03_0502 -
16604289-16605374,16605546-16605716,16607044-16607337
Length = 516
Score = 25.4 bits (53), Expect = 8.8
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 2 SGNVLPAVVIVAATGRSSRAGEGRQAVRGGRVVLAGAQP 40
S +VL A R + G GR+ V GG A A P
Sbjct: 38 SESVLDEAAAALAALRDAEVGVGRKGVGGGEEAAAAAVP 76
>03_06_0581 +
34886728-34886817,34886990-34887175,34887332-34887543,
34888161-34888318,34888615-34888773,34888921-34888973,
34889265-34889405,34889788-34889823,34890542-34890776,
34891017-34891144
Length = 465
Score = 25.4 bits (53), Expect = 8.8
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 51 PSGLAGRLQQPAGLLVPAARRVPAAMLGIPAATGSS---LVEIPTALPRNNVQ 100
P G +G Q PA + A RR P L + +A S L + P LP +Q
Sbjct: 355 PHGRSGSAQPPAASGLGAERRTPTCRLQLCSACSCSADGLEQPPAWLPPGPLQ 407
>03_05_0197 + 21884415-21885332,21886130-21886750
Length = 512
Score = 25.4 bits (53), Expect = 8.8
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 57 RLQQPAGLLVPAARRVPAAMLGIPAATGSSLVEIPTALPRNN 98
RL P L+P R P +++G G+ ++ A+ R+N
Sbjct: 371 RLHLPVPFLLPRQCREPCSVMGYDIPVGTKVLVNAWAIARDN 412
>02_01_0362 +
2607097-2607371,2607766-2608612,2608842-2608910,
2609968-2610202,2610454-2610536,2610924-2611046,
2611326-2611379
Length = 561
Score = 25.4 bits (53), Expect = 8.8
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 51 PSGLAGRLQQPAGLLVPAARRVPAAMLGIPAATGSS---LVEIPTALPRNNVQ 100
P G +G Q PA + A RR P L + +A S L + P LP +Q
Sbjct: 407 PHGRSGSAQPPAASGLGAERRTPTCRLQLCSACSCSADGLEQPPAWLPPGPLQ 459
>02_01_0172 - 1187408-1187851
Length = 147
Score = 25.4 bits (53), Expect = 8.8
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 58 LQQPA--GLLVPAARRVPAAMLGIPAATGSSLVEIPTALPRNNVQGGD 103
L PA + + RR A++LG+ G VE A+ R Q GD
Sbjct: 55 LADPARGAITAESLRRSAASVLGLGGGGGEMTVEEAAAMVREGDQDGD 102
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.136 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,477,781
Number of Sequences: 37544
Number of extensions: 156908
Number of successful extensions: 562
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 543
Number of HSP's gapped (non-prelim): 35
length of query: 105
length of database: 14,793,348
effective HSP length: 72
effective length of query: 33
effective length of database: 12,090,180
effective search space: 398975940
effective search space used: 398975940
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)
- SilkBase 1999-2023 -