GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000763-TA|BGIBMGA000763-PA|undefined
         (105 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    31   0.009
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              21   9.4  
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       21   9.4  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          21   9.4  

>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 31.1 bits (67), Expect = 0.009
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 13  AATGRSSRAGEGRQAVRGGRVVLAGAQPLRHAHLRVLGPSGLAGRLQQ--PAGLLVPAAR 70
           A T  ++ A     A        A A P+  A L    P+ ++  + +  PA    PA  
Sbjct: 214 AITAPAANAASTAAAPAAATAHAATASPVATAALAAGAPATVSTPMDKDDPAAAAAPATA 273

Query: 71  RVPAAMLGIPAATGSSL 87
            VP A++  PAAT + L
Sbjct: 274 EVPGAVVANPAATSAPL 290


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query: 58  LQQPAGLLVPAARRVPAAML 77
           L  P+GL VP   +VP  +L
Sbjct: 83  LAGPSGLAVPPMGKVPLVVL 102


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 51  PSGLAGRLQQPAGLLVPAARRVPAAM 76
           PSG  GR ++     VP++++   A+
Sbjct: 467 PSGRVGRTKRDVSYKVPSSKQAAQAV 492


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 60  QPAGLLVPAARRVPAAMLGIPAATGSSLVEIPTALPRNNVQG 101
           +P  ++VP A    A+   +  ++G+   EIPT + +N+  G
Sbjct: 499 RPGMMVVPGAGASGASRKRLRISSGNVSSEIPTVI-QNDPNG 539


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.136    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,414
Number of Sequences: 2123
Number of extensions: 4076
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 4
length of query: 105
length of database: 516,269
effective HSP length: 55
effective length of query: 50
effective length of database: 399,504
effective search space: 19975200
effective search space used: 19975200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 42 (21.0 bits)