Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000763-TA|BGIBMGA000763-PA|undefined
(105 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g25180.1 68415.m03011 two-component responsive regulator fami... 30 0.35
At5g03770.1 68418.m00341 3-deoxy-D-manno-octulosonic acid transf... 29 0.80
At5g27870.1 68418.m03343 pectinesterase family protein similar t... 28 1.1
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 1.4
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 1.4
At4g16560.1 68417.m02505 heat shock protein-related contains sim... 27 1.9
At4g16550.1 68417.m02504 heat shock protein-related contains sim... 27 1.9
At2g28480.1 68415.m03461 expressed protein contains Pfam profile... 27 3.2
At5g49150.1 68418.m06083 hypothetical protein 26 4.3
At2g47370.1 68415.m05913 expressed protein 26 4.3
At1g51580.1 68414.m05806 KH domain-containing protein 26 5.7
At1g43970.1 68414.m05072 hypothetical protein 26 5.7
At5g63510.1 68418.m07972 bacterial transferase hexapeptide repea... 25 7.5
At5g07600.1 68418.m00871 oleosin / glycine-rich protein 25 7.5
At4g12050.1 68417.m01917 DNA-binding protein-related contains Pf... 25 7.5
At3g48560.1 68416.m05302 acetolactate synthase, chloroplast / ac... 25 9.9
At3g19570.2 68416.m02482 expressed protein contains Pfam domain,... 25 9.9
At3g19570.1 68416.m02481 expressed protein contains Pfam domain,... 25 9.9
At3g17360.1 68416.m02218 kinesin motor protein-related similar t... 25 9.9
>At2g25180.1 68415.m03011 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver domain
Length = 596
Score = 29.9 bits (64), Expect = 0.35
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 46 LRVLGPSGLAGRLQQPAGLLVPAARRVPAAMLGIPAATGSSLVEIPTALPRNNVQGGDV 104
+R P+G+ GRL +G+ V + PA M + T ++LP N+ GG++
Sbjct: 298 MRSFPPNGILGRLNSSSGIGVRSLSSPPAGMF-LQNQTDIGKFHHVSSLPLNHSDGGNI 355
>At5g03770.1 68418.m00341 3-deoxy-D-manno-octulosonic acid
transferase-related similar to
3-deoxy-D-manno-octulosonic acid transferase,
Escherichia coli, PIR:JU0467; contains Pfam profile
PF04413: 3-Deoxy-D-manno-octulosonic-acid transferase
(kdotransferase)
Length = 447
Score = 28.7 bits (61), Expect = 0.80
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Query: 32 RVVLAGAQPLRHAHLRVLGPSGLAGRLQQPAGLLVPAARRVPAAMLGIPAAT-GSSLVEI 90
R + G PL H H+R GL + P P+A R P +++ A + G + I
Sbjct: 12 RALTYGVSPLIHLHIRWRRLRGLEHFSRWPERFGHPSAVRPPGSLIWFHAVSLGEGMAAI 71
Query: 91 PTALPRNNVQ 100
P N V+
Sbjct: 72 PVIRHCNEVK 81
>At5g27870.1 68418.m03343 pectinesterase family protein similar to
pectinesterase (EC 3.1.1.11) from Salix gilgiana
GI:6714532, Lycopersicon esculentum SP|Q43143, Phaseolus
vulgaris SP|Q43111; contains Pfam profile PF01095
pectinesterase
Length = 732
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 51 PSGLAGRLQQPAGLLVPAARRVPAAMLGIPAATGSSLVEIPTALPRNNV 99
P+G G ++V + PA LG P+ T SSLV T+ P ++
Sbjct: 622 PAGQLGAPPATPSMVVSPSTSPPAGHLGSPSDTPSSLVSPSTSPPAGHL 670
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 51 PSGLAGRLQQPAGLLVPAARRVPAAMLGIPAATGSSLVEIPTALPRNNV 99
P+G G +V + +PA LG P AT S +V T+ P ++
Sbjct: 600 PAGHLGSPSDTPSSVVSPSTSLPAGQLGAPPATPSMVVSPSTSPPAGHL 648
Score = 26.2 bits (55), Expect = 4.3
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 51 PSGLAGRLQQPAGLLVPAARRVPAAMLGIPAATGSSLVEIPTALP 95
P+G G LV + PA LG P+ T SS+V P+A P
Sbjct: 644 PAGHLGSPSDTPSSLVSPSTSPPAGHLGSPSDTPSSVV-TPSASP 687
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 8 AVVIVAATGRSSRAG-EGRQAVRGGRVVLAGAQPLRHAHL 46
A +I + RS RA +GR RGGR+V PL AH+
Sbjct: 391 AGIIPPSDARSGRARFQGRMG-RGGRIVFDRWNPLNQAHI 429
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 8 AVVIVAATGRSSRAG-EGRQAVRGGRVVLAGAQPLRHAHL 46
A +I + RS RA +GR RGGR+V PL AH+
Sbjct: 391 AGIIPPSDARSGRARFQGRMG-RGGRIVFDRWNPLNQAHI 429
>At4g16560.1 68417.m02505 heat shock protein-related contains
similarity to SWISS-PROT:P31170 small heat shock
protein, chloroplast precursor [Arabidopsis thaliana]
Length = 532
Score = 27.5 bits (58), Expect = 1.9
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 33 VVLAGAQPLRHAHLRVLGPSGLAGRLQQPAGLLVPAARRVPAAMLGIPAA 82
V +AG PL AHLR L P G G P R P+ + G +A
Sbjct: 201 VAVAGGHPL--AHLRGLNPEGCRGTDPFDPAFTGPTIRPHPSVLEGSTSA 248
>At4g16550.1 68417.m02504 heat shock protein-related contains
similarity to Swiss-Prot:P31170 small heat shock
protein, chloroplast precursor [Arabidopsis thaliana]
Length = 743
Score = 27.5 bits (58), Expect = 1.9
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 33 VVLAGAQPLRHAHLRVLGPSGLAGRLQQPAGLLVPAARRVPAAMLGIPAA 82
V +AG PL AHLR L P G G P R P+ + G +A
Sbjct: 355 VAVAGGHPL--AHLRGLNPEGCRGTDPFDPAFTGPTIRPHPSVLEGSTSA 402
>At2g28480.1 68415.m03461 expressed protein contains Pfam profile
PF01985: Uncharacterised protein family; expression
supported by MPSS
Length = 372
Score = 26.6 bits (56), Expect = 3.2
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 17 RSSRAGEGRQAVRGGRVVLAGAQPLRHAHLRVLGPSGLAGRLQQPAGLLVPAARRVPAAM 76
RS+ GR+ V GG ++ +H ++V+ + G++QQ A L + VP +
Sbjct: 179 RSNYVPIGRRGVFGGVILNMHLHWKKHETVKVICNNSKPGQVQQYAEELAKLSGGVPVNI 238
Query: 77 LG 78
+G
Sbjct: 239 IG 240
>At5g49150.1 68418.m06083 hypothetical protein
Length = 896
Score = 26.2 bits (55), Expect = 4.3
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 2 SGNVLPAVVIVAATGRSSRAGEGRQAVRGGRVVLAGAQP 40
SGN++ I T R G R + G +VL G QP
Sbjct: 310 SGNLVTQASIFDVTYTPKRTGIYRIFISSGNIVLNGGQP 348
>At2g47370.1 68415.m05913 expressed protein
Length = 330
Score = 26.2 bits (55), Expect = 4.3
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 2 SGNVLPAVVIVAATGRSSRAGEGRQAVRGGRVVLAGA 38
+G+V V ++ +G S R G+G + + ++V+AG+
Sbjct: 233 NGDVSSKVTVIDVSGGSLRFGDGLEFLSPTKIVVAGS 269
>At1g51580.1 68414.m05806 KH domain-containing protein
Length = 621
Score = 25.8 bits (54), Expect = 5.7
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 17 RSSRAGEGRQAVRGGRVVLAGAQPLRHAHLRVLGPSGLAGRLQQPAGLLVPAARRVPAAM 76
R S A +G V R+V G +P R+L S GRL G L+ RR A
Sbjct: 334 RHSLAQDGVMRVHN-RIVEIGFEPSAAVVARLLVHSPYIGRLLGKGGHLISEMRRATGAS 392
Query: 77 LGI 79
+ +
Sbjct: 393 IRV 395
>At1g43970.1 68414.m05072 hypothetical protein
Length = 239
Score = 25.8 bits (54), Expect = 5.7
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 42 RHAHLRVLGPSGLAGRLQQPAGLLVPAARRVPAAMLGIPAATGSSLVEIPTALPRNNVQG 101
+H +++L + Q AG V A+ PA LG+ AA ++ + AL + G
Sbjct: 173 QHPDIQILKRTSARVSQGQSAGKKV-ASSTAPATPLGLRAAVQQAVTILQAALDAGYING 231
Query: 102 G 102
G
Sbjct: 232 G 232
>At5g63510.1 68418.m07972 bacterial transferase hexapeptide
repeat-containing protein contains similarity to
acetyltransferase; contains Pfam profile PF00132:
Bacterial transferase hexapeptide (four repeats)
Length = 252
Score = 25.4 bits (53), Expect = 7.5
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 7/51 (13%)
Query: 62 AGLLVPAARRVPAAML--GIPA-----ATGSSLVEIPTALPRNNVQGGDVF 105
AG +VP RR+P+ L G PA T +EIP N GD F
Sbjct: 178 AGSVVPPGRRIPSGELWGGNPARFIRTLTNEETLEIPKLAVAINHLSGDYF 228
>At5g07600.1 68418.m00871 oleosin / glycine-rich protein
Length = 230
Score = 25.4 bits (53), Expect = 7.5
Identities = 16/45 (35%), Positives = 20/45 (44%)
Query: 13 AATGRSSRAGEGRQAVRGGRVVLAGAQPLRHAHLRVLGPSGLAGR 57
A G ++ AG AV G AGA P A P+G AG+
Sbjct: 180 AGAGAAAAAGAAAAAVPGLGAASAGAGPGAGAGTPAPAPTGKAGK 224
>At4g12050.1 68417.m01917 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 339
Score = 25.4 bits (53), Expect = 7.5
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 1 MSGNVLPAVVIVAATGRSSRAGEGRQAVRGGRVV 34
+SG+ LP AATG S G+ V GG VV
Sbjct: 209 LSGSFLPPPAPPAATGLSVYLAGGQGQVVGGSVV 242
>At3g48560.1 68416.m05302 acetolactate synthase, chloroplast /
acetohydroxy-acid synthase (ALS) nearly identical to
SP|P17597 Acetolactate synthase, chloroplast precursor
(EC 2.2.1.6, formerly EC 4.1.3.18) (Acetohydroxy-acid
synthase) (ALS) {Arabidopsis thaliana}
Length = 670
Score = 25.0 bits (52), Expect = 9.9
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 52 SGLAGRLQQPAGLLVPAARRVPAAMLGIPAATGSSLVEIPTALPRNNVQGGDV 104
SGLA L L V +VP M+G A + +VE+ ++ ++N DV
Sbjct: 177 SGLADALLDSVPL-VAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVMDV 228
>At3g19570.2 68416.m02482 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 25.0 bits (52), Expect = 9.9
Identities = 9/37 (24%), Positives = 24/37 (64%)
Query: 62 AGLLVPAARRVPAAMLGIPAATGSSLVEIPTALPRNN 98
+ +++ +++R P+ +L + S+LV P++LP+ +
Sbjct: 76 SSVILRSSKRYPSPLLSRTTNSASNLVYTPSSLPKRS 112
>At3g19570.1 68416.m02481 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 627
Score = 25.0 bits (52), Expect = 9.9
Identities = 9/37 (24%), Positives = 24/37 (64%)
Query: 62 AGLLVPAARRVPAAMLGIPAATGSSLVEIPTALPRNN 98
+ +++ +++R P+ +L + S+LV P++LP+ +
Sbjct: 76 SSVILRSSKRYPSPLLSRTTNSASNLVYTPSSLPKRS 112
>At3g17360.1 68416.m02218 kinesin motor protein-related similar to
KLP2 protein GB:CAA63826 from [Xenopus laevis]
Length = 2008
Score = 25.0 bits (52), Expect = 9.9
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 2 SGNVLPAVVIVAATG--RSSRAGEGRQAVRGGRVVLAGAQPLRHAHLRVLGPSGLAGRLQ 59
S N + + ++A G S GEGRQ+V ++ G + + + L G +Q
Sbjct: 1152 SNNKITSAALIAKNGSAHSVYCGEGRQSVEKPLTIMMGREETEYKCSKPLSSGVYMGLMQ 1211
Query: 60 Q 60
+
Sbjct: 1212 R 1212
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.136 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,285,265
Number of Sequences: 28952
Number of extensions: 84713
Number of successful extensions: 152
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 139
Number of HSP's gapped (non-prelim): 21
length of query: 105
length of database: 12,070,560
effective HSP length: 71
effective length of query: 34
effective length of database: 10,014,968
effective search space: 340508912
effective search space used: 340508912
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 52 (25.0 bits)
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