Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000762-TA|BGIBMGA000762-PA|IPR001356|Homeobox,
IPR009057|Homeodomain-like
(112 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8061| Best HMM Match : Homeobox (HMM E-Value=5.1e-27) 78 1e-15
SB_7899| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 9e-14
SB_22129| Best HMM Match : Homeobox (HMM E-Value=4.6e-26) 72 1e-13
SB_8063| Best HMM Match : Homeobox (HMM E-Value=8.5e-24) 70 4e-13
SB_55403| Best HMM Match : Homeobox (HMM E-Value=8e-07) 65 1e-11
SB_25357| Best HMM Match : Homeobox (HMM E-Value=8.3e-28) 56 9e-09
SB_51696| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 2e-07
SB_18749| Best HMM Match : Homeobox (HMM E-Value=6.1e-28) 51 2e-07
SB_47662| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-07
SB_42639| Best HMM Match : Homeobox (HMM E-Value=1e-26) 48 2e-06
SB_26105| Best HMM Match : Homeobox (HMM E-Value=1.1e-30) 48 2e-06
SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26) 48 2e-06
SB_37787| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 2e-06
SB_36166| Best HMM Match : Homeobox (HMM E-Value=2.6e-28) 46 7e-06
SB_42150| Best HMM Match : Homeobox (HMM E-Value=1.8e-29) 45 2e-05
SB_50832| Best HMM Match : Homeobox (HMM E-Value=8.7e-23) 44 4e-05
SB_24287| Best HMM Match : Homeobox (HMM E-Value=9e-28) 43 5e-05
SB_3037| Best HMM Match : Homeobox (HMM E-Value=4.3e-27) 42 2e-04
SB_57648| Best HMM Match : Homeobox (HMM E-Value=5.3e-30) 41 2e-04
SB_39723| Best HMM Match : Homeobox (HMM E-Value=5.4e-32) 41 2e-04
SB_11160| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 2e-04
SB_34953| Best HMM Match : Homeobox (HMM E-Value=1e-25) 41 3e-04
SB_596| Best HMM Match : Homeobox (HMM E-Value=4.5e-32) 40 4e-04
SB_23338| Best HMM Match : Homeobox (HMM E-Value=3.1e-26) 40 5e-04
SB_21878| Best HMM Match : Homeobox (HMM E-Value=1.5e-25) 40 5e-04
SB_37814| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 5e-04
SB_11435| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 5e-04
SB_3426| Best HMM Match : Homeobox (HMM E-Value=3.4e-22) 40 5e-04
SB_36278| Best HMM Match : Homeobox (HMM E-Value=4.8e-30) 40 6e-04
SB_30811| Best HMM Match : Homeobox (HMM E-Value=2.5e-26) 40 6e-04
SB_53178| Best HMM Match : Homeobox (HMM E-Value=2.5e-26) 40 6e-04
SB_57651| Best HMM Match : Homeobox (HMM E-Value=3e-29) 39 8e-04
SB_3427| Best HMM Match : Homeobox (HMM E-Value=4e-24) 39 8e-04
SB_20497| Best HMM Match : Homeobox (HMM E-Value=1.4013e-45) 39 0.001
SB_58034| Best HMM Match : VWA (HMM E-Value=0) 39 0.001
SB_14693| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.001
SB_53611| Best HMM Match : Homeobox (HMM E-Value=1.2e-25) 38 0.001
SB_29287| Best HMM Match : Homeobox (HMM E-Value=1.4e-25) 38 0.001
SB_49708| Best HMM Match : Homeobox (HMM E-Value=8.1e-30) 38 0.001
SB_29192| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.001
SB_19758| Best HMM Match : Homeobox (HMM E-Value=1.6e-20) 38 0.001
SB_8992| Best HMM Match : Homeobox (HMM E-Value=1.4e-25) 38 0.001
SB_49275| Best HMM Match : Homeobox (HMM E-Value=2.8e-27) 38 0.002
SB_15| Best HMM Match : Homeobox (HMM E-Value=4.1e-30) 38 0.002
SB_55443| Best HMM Match : Homeobox (HMM E-Value=2.3e-26) 37 0.003
SB_22062| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.004
SB_39292| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.006
SB_22965| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.006
SB_8774| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.008
SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0) 35 0.013
SB_32587| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.013
SB_14196| Best HMM Match : FG-GAP (HMM E-Value=0) 35 0.013
SB_48630| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.017
SB_32283| Best HMM Match : Homeobox (HMM E-Value=4.5e-20) 35 0.017
SB_10407| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.017
SB_10405| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.017
SB_54937| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.023
SB_48629| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.023
SB_21036| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.023
SB_41873| Best HMM Match : Homeobox (HMM E-Value=2.3e-29) 34 0.023
SB_10406| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.030
SB_53176| Best HMM Match : Homeobox (HMM E-Value=0) 34 0.030
SB_10703| Best HMM Match : Homeobox (HMM E-Value=4.6e-08) 33 0.040
SB_18528| Best HMM Match : Homeobox (HMM E-Value=1.3e-16) 33 0.070
SB_44118| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.12
SB_21452| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.12
SB_25008| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.12
SB_10895| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.12
SB_41100| Best HMM Match : Homeobox (HMM E-Value=1.5e-24) 31 0.16
SB_37025| Best HMM Match : Homeobox (HMM E-Value=1.3e-16) 31 0.21
SB_5629| Best HMM Match : PAX (HMM E-Value=0) 30 0.37
SB_49289| Best HMM Match : Homeobox (HMM E-Value=6e-30) 30 0.50
SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.66
SB_11862| Best HMM Match : Homeobox (HMM E-Value=1.1e-16) 28 1.5
SB_21212| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.5
SB_53345| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.0
SB_17653| Best HMM Match : RCSD (HMM E-Value=5.1) 27 2.6
SB_10426| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.6
SB_16524| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.6
SB_16224| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.6
SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09) 27 2.6
SB_5296| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.6
SB_48493| Best HMM Match : Homeobox (HMM E-Value=6.3e-08) 27 3.5
SB_45588| Best HMM Match : Arg_repressor_C (HMM E-Value=7.7) 27 4.6
SB_28281| Best HMM Match : Pou (HMM E-Value=0) 27 4.6
SB_45599| Best HMM Match : GRP (HMM E-Value=0.22) 27 4.6
SB_51509| Best HMM Match : Homeobox (HMM E-Value=2.3e-09) 26 6.1
SB_41749| Best HMM Match : Homeobox (HMM E-Value=4.1e-29) 26 6.1
SB_39161| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.1
SB_57795| Best HMM Match : Homeobox (HMM E-Value=0.14) 26 6.1
>SB_8061| Best HMM Match : Homeobox (HMM E-Value=5.1e-27)
Length = 418
Score = 78.2 bits (184), Expect = 1e-15
Identities = 35/45 (77%), Positives = 42/45 (93%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
++RKRRVLFT+AQ YELERRF+QQ+YLSAPERE LA +I+LTPTQ
Sbjct: 91 KKRKRRVLFTKAQTYELERRFRQQRYLSAPEREQLARIINLTPTQ 135
>SB_7899| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 72.1 bits (169), Expect = 9e-14
Identities = 30/44 (68%), Positives = 40/44 (90%)
Query: 22 RRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
++K+R+LFT++Q+YELERRF+ Q+YLSAPEREHLA +I LTP Q
Sbjct: 124 KKKKRILFTRSQIYELERRFRVQQYLSAPEREHLARMISLTPVQ 167
>SB_22129| Best HMM Match : Homeobox (HMM E-Value=4.6e-26)
Length = 366
Score = 71.7 bits (168), Expect = 1e-13
Identities = 31/45 (68%), Positives = 41/45 (91%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+++KRR+LFT++Q++ELERRF+QQKYLSA ERE LA +I LTPTQ
Sbjct: 223 RKKKRRILFTKSQIFELERRFRQQKYLSANEREQLARIIDLTPTQ 267
>SB_8063| Best HMM Match : Homeobox (HMM E-Value=8.5e-24)
Length = 963
Score = 70.1 bits (164), Expect = 4e-13
Identities = 33/56 (58%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 10 PDAKPMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
P +P+ P ++RKRR+LFT+AQ + LERRF QQ+YLSAPERE LA + +LTP Q
Sbjct: 80 PRKEPLSEP-PKKRKRRILFTKAQTFILERRFTQQRYLSAPEREELARIANLTPAQ 134
>SB_55403| Best HMM Match : Homeobox (HMM E-Value=8e-07)
Length = 243
Score = 65.3 bits (152), Expect = 1e-11
Identities = 27/40 (67%), Positives = 37/40 (92%)
Query: 22 RRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHL 61
++K+R+LFT++Q+YELERRF+ Q+YLSAPEREHLA +I L
Sbjct: 7 KKKKRILFTRSQIYELERRFRVQQYLSAPEREHLARMISL 46
>SB_25357| Best HMM Match : Homeobox (HMM E-Value=8.3e-28)
Length = 317
Score = 55.6 bits (128), Expect = 9e-09
Identities = 28/45 (62%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 22 RRKR-RVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
RRKR R F+ QV+ELERRF QKYLS PER LA+ + LT TQ
Sbjct: 129 RRKRSRAAFSHQQVFELERRFSHQKYLSGPERADLAAALKLTETQ 173
>SB_51696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 51.2 bits (117), Expect = 2e-07
Identities = 22/45 (48%), Positives = 34/45 (75%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+++K R +F+++QVY+LE F ++YLS+ ER LAS +HLT TQ
Sbjct: 212 RKKKTRTVFSRSQVYQLESTFDMKRYLSSSERAGLASQLHLTETQ 256
>SB_18749| Best HMM Match : Homeobox (HMM E-Value=6.1e-28)
Length = 222
Score = 51.2 bits (117), Expect = 2e-07
Identities = 21/45 (46%), Positives = 35/45 (77%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+++K R FT Q++ELE++F+ +KYL+A ER +ASL+++T TQ
Sbjct: 108 KKKKARTTFTGRQIFELEKQFEAKKYLTATERSDMASLLNVTETQ 152
>SB_47662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 50.4 bits (115), Expect = 3e-07
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 22 RRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
++K R FT++Q+ ELE+RF+ QKYL + ER LA + LT TQ
Sbjct: 402 KKKPRTAFTESQISELEKRFQSQKYLGSKERSELAGTLGLTDTQ 445
>SB_42639| Best HMM Match : Homeobox (HMM E-Value=1e-26)
Length = 225
Score = 48.0 bits (109), Expect = 2e-06
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
R+RR FT +Q+ LE +F+++KYL+ ER LA +HLT TQ
Sbjct: 100 RRRRTAFTSSQLKSLEEKFQEKKYLTISERNSLAKSMHLTNTQ 142
>SB_26105| Best HMM Match : Homeobox (HMM E-Value=1.1e-30)
Length = 315
Score = 48.0 bits (109), Expect = 2e-06
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 11 DAKPMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
D KP F + ++ R +FT Q+ LE+ F++Q+Y+ ER +LA+ ++LT TQ
Sbjct: 237 DNKPWNFKQGKPKRIRTIFTPEQLERLEKEFERQQYMVGAERHYLAASLNLTETQ 291
>SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26)
Length = 1064
Score = 48.0 bits (109), Expect = 2e-06
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
R+RR FT +Q+ LE +F+++KYL+ ER LA +HLT TQ
Sbjct: 939 RRRRTAFTSSQLKSLEEKFQEKKYLTISERNSLAKSMHLTNTQ 981
>SB_37787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 47.6 bits (108), Expect = 2e-06
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 13 KPMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
K + P ++RK+RVLF++ Q +LE++F ++ YLS ER+ LA ++LT Q
Sbjct: 10 KSERIPSHRKRKQRVLFSKVQRKQLEKKFLEKPYLSYTERDQLARAVNLTAKQ 62
>SB_36166| Best HMM Match : Homeobox (HMM E-Value=2.6e-28)
Length = 209
Score = 46.0 bits (104), Expect = 7e-06
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+RRK R FT Q+ ELERRF QKYLS +R+ +A + L Q
Sbjct: 122 KRRKPRTCFTNRQIIELERRFMYQKYLSPSDRDDIAMALGLPGAQ 166
>SB_42150| Best HMM Match : Homeobox (HMM E-Value=1.8e-29)
Length = 122
Score = 44.8 bits (101), Expect = 2e-05
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 20 AQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
A RR++R FT Q+ +LER F +KY+S ER +A+ ++LT Q
Sbjct: 23 ASRRRKRTAFTSKQLLQLEREFHNKKYVSLEERSVIATNLNLTEVQ 68
>SB_50832| Best HMM Match : Homeobox (HMM E-Value=8.7e-23)
Length = 285
Score = 43.6 bits (98), Expect = 4e-05
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
R+ R +FT+ Q+ +LE RFK KYLS +R A + LTP Q
Sbjct: 205 RRIRTVFTRDQLQKLEDRFKHDKYLSTQDRNEFARSLQLTPLQ 247
>SB_24287| Best HMM Match : Homeobox (HMM E-Value=9e-28)
Length = 561
Score = 43.2 bits (97), Expect = 5e-05
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 20 AQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
++ R++R FT +Q+ LE +F+++KYL+ ER LA ++L+ TQ
Sbjct: 431 SKSRRKRTAFTSSQLKYLEEKFQEKKYLTISERNELAKSMYLSDTQ 476
>SB_3037| Best HMM Match : Homeobox (HMM E-Value=4.3e-27)
Length = 308
Score = 41.5 bits (93), Expect = 2e-04
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
RK R +++ Q+ EL +RF + +YL+ PER LA+ + LT TQ
Sbjct: 175 RKPRTIYSSFQLRELNKRFIKTQYLALPERADLAAYLGLTQTQ 217
>SB_57648| Best HMM Match : Homeobox (HMM E-Value=5.3e-30)
Length = 205
Score = 41.1 bits (92), Expect = 2e-04
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 13 KP-MQFPLAQR-RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
KP ++ P +R RK R +FT Q+ LE+ F +QKYL R LA + L TQ
Sbjct: 109 KPTLRTPCGRRCRKSRTVFTDLQLRVLEKTFSEQKYLDTSSRSKLAQTLGLNETQ 163
>SB_39723| Best HMM Match : Homeobox (HMM E-Value=5.4e-32)
Length = 257
Score = 41.1 bits (92), Expect = 2e-04
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+ R+ R F+ Q+ LER+F+ KYL+ P+R LA+ + LT TQ
Sbjct: 105 RHRRPRTAFSSHQLLALERQFQLHKYLTRPQRYELATSLMLTETQ 149
>SB_11160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 236
Score = 41.1 bits (92), Expect = 2e-04
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 20 AQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
++R+ R F+ Q++ LE+ F+Q KYL+ PER LA + +T +Q
Sbjct: 133 SKRKHTRPTFSGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQ 178
>SB_34953| Best HMM Match : Homeobox (HMM E-Value=1e-25)
Length = 200
Score = 40.7 bits (91), Expect = 3e-04
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 19 LAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
LA++R++R FT Q+ LE +FK KYL+ ER+ +A + LT Q
Sbjct: 93 LAKKRRKRTAFTSFQLKCLEDKFKFSKYLTIAERDMMARSLQLTNRQ 139
>SB_596| Best HMM Match : Homeobox (HMM E-Value=4.5e-32)
Length = 162
Score = 40.3 bits (90), Expect = 4e-04
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 22 RRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+++ R FT Q+ +LE F++ KYLS R LA+ + LT TQ
Sbjct: 26 KKRPRTAFTNEQIKDLEAEFQKSKYLSVSRRMELANSLSLTETQ 69
>SB_23338| Best HMM Match : Homeobox (HMM E-Value=3.1e-26)
Length = 275
Score = 39.9 bits (89), Expect = 5e-04
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 19 LAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+A +K R F+ QV+ LE+ F+ Q+YL ER+ LA +++T Q
Sbjct: 95 IAVPKKNRSSFSAEQVFRLEKTFELQQYLGTKERQQLALALNMTDNQ 141
>SB_21878| Best HMM Match : Homeobox (HMM E-Value=1.5e-25)
Length = 99
Score = 39.9 bits (89), Expect = 5e-04
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 18 PLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
P +R R +FTQ Q LE+RF+ QKY++ +R LA+++ L+ TQ
Sbjct: 3 PQRRRPWSRPVFTQLQRRGLEKRFQVQKYITIHDRYQLAAMLGLSETQ 50
>SB_37814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 39.9 bits (89), Expect = 5e-04
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
++ K+R LF+ Q+ LE+ FK++KYL+ +R L+ + +T TQ
Sbjct: 200 RKPKQRPLFSHNQIQRLEKEFKEEKYLTESKRAELSKDLGMTETQ 244
>SB_11435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 39.9 bits (89), Expect = 5e-04
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 13 KP-MQFPLAQR-RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
KP ++ P +R RK R +FT Q+ LE+ F +QKYL R LA + L TQ
Sbjct: 499 KPTIRTPSGRRCRKSRTVFTDLQLRVLEKTFSEQKYLDTSSRAKLAQTLGLNETQ 553
>SB_3426| Best HMM Match : Homeobox (HMM E-Value=3.4e-22)
Length = 245
Score = 39.9 bits (89), Expect = 5e-04
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 18 PLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQFHN 68
P + RR F+ QV +LER F Q+Y+SA ER +A ++T Q N
Sbjct: 75 PEKSTKPRRSFFSADQVNQLERVFTAQQYVSAKERAEIAETFNMTDDQVKN 125
>SB_36278| Best HMM Match : Homeobox (HMM E-Value=4.8e-30)
Length = 166
Score = 39.5 bits (88), Expect = 6e-04
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
R+ R FT Q+ LE +FK +YLS ER +LA + LT TQ
Sbjct: 49 RRARTAFTYEQLVALENKFKSTRYLSVCERLNLALSLGLTETQ 91
>SB_30811| Best HMM Match : Homeobox (HMM E-Value=2.5e-26)
Length = 133
Score = 39.5 bits (88), Expect = 6e-04
Identities = 24/76 (31%), Positives = 36/76 (47%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQFHNGPVDNLRRVNINFI 82
+K+R FTQ Q+ ELE+ F KYL+ R +A+ + LT Q + + F
Sbjct: 23 QKKRFTFTQRQLVELEKEFHFSKYLTRTRRIEIATTLKLTEMQIKIWFQNRRMKWKREFK 82
Query: 83 NSPCNPDKGPQTSMNN 98
+S P G T N+
Sbjct: 83 DSLQKPANGEPTYQNS 98
>SB_53178| Best HMM Match : Homeobox (HMM E-Value=2.5e-26)
Length = 428
Score = 39.5 bits (88), Expect = 6e-04
Identities = 24/76 (31%), Positives = 36/76 (47%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQFHNGPVDNLRRVNINFI 82
+K+R FTQ Q+ ELE+ F KYL+ R +A+ + LT Q + + F
Sbjct: 250 QKKRFTFTQRQLVELEKEFHFSKYLTRTRRIEIATTLKLTEMQIKIWFQNRRMKWKREFK 309
Query: 83 NSPCNPDKGPQTSMNN 98
+S P G T N+
Sbjct: 310 DSLQKPANGEPTYQNS 325
>SB_57651| Best HMM Match : Homeobox (HMM E-Value=3e-29)
Length = 294
Score = 39.1 bits (87), Expect = 8e-04
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
RK R +FT Q+ LE+ F +QKYL + R LA ++ L Q
Sbjct: 169 RKSRTVFTDLQLRVLEKTFSEQKYLDSTNRAKLAQILGLNEAQ 211
>SB_3427| Best HMM Match : Homeobox (HMM E-Value=4e-24)
Length = 245
Score = 39.1 bits (87), Expect = 8e-04
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 10 PDAKPMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
PD+ P P + RR F+ QV +LER F ++Y+SA ER +A +++T Q
Sbjct: 69 PDSDPA--PDKAAKPRRSFFSADQVSQLERVFAARQYVSAKERAEIAETLNMTDDQ 122
>SB_20497| Best HMM Match : Homeobox (HMM E-Value=1.4013e-45)
Length = 527
Score = 38.7 bits (86), Expect = 0.001
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 19 LAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
L ++RK R FT+ Q+ ELE F++ YL+ R +A + LT Q
Sbjct: 89 LGKKRKERTAFTKHQIQELENEFQRNNYLTRLRRYEIAVSLDLTERQ 135
Score = 33.1 bits (72), Expect = 0.053
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 20 AQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+++RK R +F++ Q+ ELER F + YL+ R +A + L Q
Sbjct: 348 SRKRKERTVFSKYQLTELEREFCRNNYLTRLRRYEIAVSLDLGERQ 393
>SB_58034| Best HMM Match : VWA (HMM E-Value=0)
Length = 1203
Score = 38.7 bits (86), Expect = 0.001
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 19 LAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
LA+ K R LF++ Q+ LE+ F KYL+ +RE L+ + +T TQ
Sbjct: 1112 LAKPTKLRPLFSKTQLSRLEKEFSGNKYLTESKREQLSKDLGMTETQ 1158
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/45 (35%), Positives = 30/45 (66%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+R K R LF++ Q+ LE+ F++++YL+ +R L+ + +T TQ
Sbjct: 1015 KRPKLRPLFSKTQLSRLEKEFEEKRYLTETKRAELSKDLEMTETQ 1059
>SB_14693| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 38.7 bits (86), Expect = 0.001
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 10 PDAKPMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQFHN 68
PD+ P P + RR F+ QV +LER F +Y+SA ER +A ++++ Q N
Sbjct: 69 PDSDPA--PDKSTKPRRSFFSADQVNQLERVFAAHQYVSANERAEIAETLNMSDDQVKN 125
>SB_53611| Best HMM Match : Homeobox (HMM E-Value=1.2e-25)
Length = 389
Score = 38.3 bits (85), Expect = 0.001
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 26 RVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
R +F+ Q LE+RF+ QKYL+ +R LAS++ LT Q
Sbjct: 318 RAVFSNLQRKGLEKRFQVQKYLTKADRHQLASMLGLTDNQ 357
>SB_29287| Best HMM Match : Homeobox (HMM E-Value=1.4e-25)
Length = 207
Score = 38.3 bits (85), Expect = 0.001
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 20 AQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
A+R R +F+ Q LE+RF+ QKYL+ +R LAS++ L+ Q
Sbjct: 129 ARRPWTRAVFSNLQRKGLEKRFQVQKYLTKADRHQLASMLGLSDNQ 174
>SB_49708| Best HMM Match : Homeobox (HMM E-Value=8.1e-30)
Length = 197
Score = 38.3 bits (85), Expect = 0.001
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 17 FPLAQRRKR-RVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
F +R KR R FT Q+ LE F++ Y+ ER+ LAS ++L+ TQ
Sbjct: 85 FVACRRPKRIRTAFTPTQLLHLENAFEKNHYIVGTERKQLASYLNLSETQ 134
>SB_29192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 695
Score = 38.3 bits (85), Expect = 0.001
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MGGLAACAGPDAKPMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIH 60
+ A+ PD+ P + ++ ++ R +T Q+ ELE+ F Q +YLS R +A+L+
Sbjct: 281 LASYASSRDPDS-PSRGGNSRSKRIRTAYTSMQLLELEKEFSQNRYLSRLRRIQIAALLD 339
Query: 61 LTPTQ 65
L+ Q
Sbjct: 340 LSEKQ 344
>SB_19758| Best HMM Match : Homeobox (HMM E-Value=1.6e-20)
Length = 228
Score = 38.3 bits (85), Expect = 0.001
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+++K+R LF Q Q+ LE F +KY+S R LA+ I LT Q
Sbjct: 119 KKQKQRPLFGQKQIQRLEEEFVCEKYISKSRRSALAAEIDLTDAQ 163
>SB_8992| Best HMM Match : Homeobox (HMM E-Value=1.4e-25)
Length = 156
Score = 38.3 bits (85), Expect = 0.001
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 20 AQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
A+R R +F+ Q LE+RF+ QKYL+ +R LAS++ L+ Q
Sbjct: 78 ARRPWTRAVFSNLQRKGLEKRFQVQKYLTKADRHQLASMLGLSDNQ 123
>SB_49275| Best HMM Match : Homeobox (HMM E-Value=2.8e-27)
Length = 116
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
++ R +F Q+ LE+ F++Q+Y++ ER LA+ ++LT TQ
Sbjct: 51 KRCRTIFAPYQLQRLEKAFERQQYVAGEERRQLATGLNLTETQ 93
>SB_15| Best HMM Match : Homeobox (HMM E-Value=4.1e-30)
Length = 287
Score = 37.5 bits (83), Expect = 0.002
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 20 AQRRKR-RVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
A++ KR R +F+ Q+ LER F Q+Y+ ER +LA+ + LT TQ
Sbjct: 208 AEKPKRVRTIFSPDQLDRLEREFDNQQYIVGTERFYLATELGLTETQ 254
>SB_55443| Best HMM Match : Homeobox (HMM E-Value=2.3e-26)
Length = 245
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 10 PDAKPMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
PD+ P P + RR F+ QV +LER F +Y+SA ER +A ++++ Q
Sbjct: 69 PDSDPA--PDKSTKPRRSFFSADQVNQLERVFAAHQYVSANERAEIAETLNMSDDQ 122
>SB_22062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 36.7 bits (81), Expect = 0.004
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 12 AKPMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
AKP+ ++ R+ R FT Q+ LE F + Y+ ER+ LAS + L+ TQ
Sbjct: 122 AKPLAARSSRVRRVRTAFTPFQLLCLETSFDKNHYVVGTERKQLASYLKLSETQ 175
>SB_39292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 36.3 bits (80), Expect = 0.006
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQFHNGPVDNLRRVNIN 80
++R+ R FT QV ELE+ F + +Y RE LA ++LT + + + V
Sbjct: 20 KQRRSRTKFTSKQVDELEKAFLKTQYPDVYTREELAQRLNLTEARVQRRILHKWQWVIWW 79
Query: 81 FINSPCNP 88
+ + CNP
Sbjct: 80 SLTTMCNP 87
>SB_22965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 36.3 bits (80), Expect = 0.006
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 20 AQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHL 61
A++R+ R +FT Q+ ELE+ FK+ Y RE+L+ I L
Sbjct: 94 AKKRRHRTIFTNYQLEELEKAFKESHYPDVYARENLSLKIDL 135
>SB_8774| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 223
Score = 35.9 bits (79), Expect = 0.008
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 14 PMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
P + + ++R+ +T+ Q+ ELE+ F +YL+ R +A ++ LT Q
Sbjct: 140 PWHYKQPFKHRKRMAYTRIQLLELEKEFHFTRYLTKERRTEMARMLDLTERQ 191
>SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 824
Score = 35.1 bits (77), Expect = 0.013
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 18 PLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQFHN 68
P ++++ R F+Q Q+ L+ F +Q YLS ER LA + +T Q N
Sbjct: 489 PDKKKKRHRSHFSQLQLQYLDAIFARQHYLSRDERTVLAGALDMTELQVRN 539
>SB_32587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 35.1 bits (77), Expect = 0.013
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 24 KRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
K R +++ Q+ ELE+ F +YL P R +A + LT Q
Sbjct: 70 KNRTIYSTRQLVELEKEFHYNRYLCRPRRIEIAQSLELTEKQ 111
>SB_14196| Best HMM Match : FG-GAP (HMM E-Value=0)
Length = 693
Score = 35.1 bits (77), Expect = 0.013
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 18 PLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQFHN 68
P ++++ R F+Q Q+ L+ F +Q YLS ER LA + +T Q N
Sbjct: 22 PDKKKKRHRSHFSQLQLQYLDAIFARQHYLSRDERTVLAGALDMTELQVRN 72
>SB_48630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 34.7 bits (76), Expect = 0.017
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQFHNGPVDNLRRVNIN 80
++RK R F++ Q+ ELE F + YL+ R +A + LT Q N RR+
Sbjct: 141 RKRKERTAFSKHQLQELENEFIRNNYLTRLRRYEIAVSLDLTERQVKVW-FQN-RRMKWK 198
Query: 81 FINSPCNPDKGPQTSMNN 98
+ P+K P ++ N
Sbjct: 199 RVKGGKKPEKRPASNAEN 216
>SB_32283| Best HMM Match : Homeobox (HMM E-Value=4.5e-20)
Length = 398
Score = 34.7 bits (76), Expect = 0.017
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 7 CAGPDAKPMQFPLAQRRKR-RVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
C+ P +P R R FT+ QV L+R F ++Y+ + ER+ LA +++T Q
Sbjct: 224 CSSPGTRPSLCSSPDTRTTTRSFFTEHQVACLQRVFANRRYVCSSERQKLAKELNMTDQQ 283
>SB_10407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 34.7 bits (76), Expect = 0.017
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
++ R +T Q+ ELE+ F KYL R LA+ + LT Q
Sbjct: 100 KRYRTSYTNRQLLELEKEFHYNKYLCGTRRRELANAMKLTERQ 142
>SB_10405| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 368
Score = 34.7 bits (76), Expect = 0.017
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 11 DAKPMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+A ++F + +R R +T Q+ ELE+ F KYL + R ++ + LT Q
Sbjct: 70 EANQLRFVRSSKR-HRTSYTNKQLLELEKEFHFNKYLCSSRRREISKALQLTERQ 123
>SB_54937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 34.3 bits (75), Expect = 0.023
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 9 GPDAKPMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQFHN 68
G D P + R+ R FT Q+ LE+ F++ Y RE LA+ I ++ +
Sbjct: 96 GKDEDPATNQKRKLRRNRTTFTPDQLEMLEKEFEKSHYPDVATREELANKIDMSEARVQK 155
Query: 69 G 69
G
Sbjct: 156 G 156
>SB_48629| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 34.3 bits (75), Expect = 0.023
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
++RK R FT Q+ ELE F + YL+ R +A + LT Q
Sbjct: 144 KKRKERTAFTTHQLRELENEFTRNNYLTRLRRYEIAVSLDLTERQ 188
>SB_21036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 34.3 bits (75), Expect = 0.023
Identities = 17/54 (31%), Positives = 32/54 (59%)
Query: 9 GPDAKPMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLT 62
G D++ ++R+ R FT+ Q+ ELE+ F+++ Y RE LA+ I+++
Sbjct: 55 GSDSENPATVRRKQRRNRTTFTKQQLQELEKVFEKKHYPDIALREELAAKINIS 108
>SB_41873| Best HMM Match : Homeobox (HMM E-Value=2.3e-29)
Length = 651
Score = 34.3 bits (75), Expect = 0.023
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 21 QRRKR-RVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
Q+RKR R F+ Q+ +LE+RF+ Y+ ER+ +A + L+ Q
Sbjct: 542 QKRKRARTAFSAEQLKKLEKRFQANHYIVGEERQKIAKDLDLSEAQ 587
>SB_10406| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 33.9 bits (74), Expect = 0.030
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+ ++ R +T Q+ ELE+ F KYL + R ++ + LT Q
Sbjct: 169 ESKRHRTSYTNKQLLELEKEFHFNKYLCSSRRREISKALQLTERQ 213
>SB_53176| Best HMM Match : Homeobox (HMM E-Value=0)
Length = 373
Score = 33.9 bits (74), Expect = 0.030
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPT 64
R+ R FT+ Q+ LE+ F ++ Y+S R LA+ ++L+ T
Sbjct: 65 RRYRTAFTREQLKRLEKEFMRENYVSRTRRCELANALNLSET 106
Score = 33.9 bits (74), Expect = 0.030
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPT 64
R+ R FT+ Q+ LE+ F ++ Y+S R LA+ ++L+ T
Sbjct: 220 RRYRTAFTREQLKRLEKEFMRENYVSRTRRCELANALNLSET 261
>SB_10703| Best HMM Match : Homeobox (HMM E-Value=4.6e-08)
Length = 531
Score = 33.5 bits (73), Expect = 0.040
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
R+ R +F+ Q+ LER F +Y+ +R+ LAS + L+ TQ
Sbjct: 468 RRGRTVFSAQQLQVLERVFAGSQYIVGSQRKFLASQLRLSETQ 510
>SB_18528| Best HMM Match : Homeobox (HMM E-Value=1.3e-16)
Length = 390
Score = 32.7 bits (71), Expect = 0.070
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 20 AQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ----FHN 68
++ R +R +F V +LE+ F +++Y+SA +R LA +++T Q FHN
Sbjct: 78 SKARNKRPVFHPDVVAQLEQVFDERRYISADQRFALAKELNMTEEQVKSWFHN 130
>SB_44118| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 611
Score = 31.9 bits (69), Expect = 0.12
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQFHN 68
R++R FT Q+ +LE+ F++ Y RE LA ++L+ + N
Sbjct: 329 RRQRTNFTDEQIEKLEKVFEKTHYPDVFTREGLAQQVNLSEARIQN 374
>SB_21452| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 31.9 bits (69), Expect = 0.12
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLT 62
++ + R F+Q Q+ ELER F + Y RE LA+ + LT
Sbjct: 62 KKTRYRTTFSQYQIEELERAFDKAPYPDVFAREELAAKLGLT 103
>SB_25008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 31.9 bits (69), Expect = 0.12
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 24 KRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQFHN 68
+ R FT+ Q+ LE + +YLS ER LA + +T Q N
Sbjct: 155 RTRTHFTERQLKYLETYYSNGRYLSRDERTVLAQALEMTELQVRN 199
>SB_10895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 31.9 bits (69), Expect = 0.12
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLT 62
++R+ R FT Q+ ELER F + Y RE LA I LT
Sbjct: 285 KQRRYRTTFTSYQLEELERAFAKTHYPDVFTREALAVKIDLT 326
>SB_41100| Best HMM Match : Homeobox (HMM E-Value=1.5e-24)
Length = 103
Score = 31.5 bits (68), Expect = 0.16
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 22 RRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLT 62
R + R +T +Q ELE+ F +Y++ R+ LA+ + L+
Sbjct: 18 RSRARTAYTASQQLELEKEFLYSRYITRTRRKELANTLDLS 58
>SB_37025| Best HMM Match : Homeobox (HMM E-Value=1.3e-16)
Length = 154
Score = 31.1 bits (67), Expect = 0.21
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 34 VYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
V +LER F Q+Y+SA ER +A +++T Q
Sbjct: 1 VNQLERVFAAQQYVSAKERAEIAETLNMTDDQ 32
>SB_5629| Best HMM Match : PAX (HMM E-Value=0)
Length = 383
Score = 30.3 bits (65), Expect = 0.37
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 18 PLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ----FHNGPVDN 73
PL R+ R FT Q++ L+ F + Y + ER+ LA + + ++ F N +
Sbjct: 273 PLLLTRRTRTRFTSQQLHVLQSEFTRNPYPTLEERKELARYLCVCESRVQVWFSNKRAQD 332
Query: 74 LRRVNINFINSPCNPD 89
RR + SP N D
Sbjct: 333 KRRTR-SVDLSPANVD 347
>SB_49289| Best HMM Match : Homeobox (HMM E-Value=6e-30)
Length = 285
Score = 29.9 bits (64), Expect = 0.50
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 7 CAGPDAKPMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLT 62
C P K + R R+ FT Q+ +LER F+Q Y A RE LA + L+
Sbjct: 102 CIEPTIKSSVSQIKAPRNRKN-FTGDQLRDLERLFEQTHYPDAMTREGLAKKLGLS 156
>SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 29.5 bits (63), Expect = 0.66
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLT 62
++R++R FT Q+ +LE F + +Y RE +A +LT
Sbjct: 740 KQRRQRTHFTSFQLQQLEGTFGRNRYPDMQMREEIALYTNLT 781
Score = 26.6 bits (56), Expect = 4.6
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHL 61
R+ R F Q Q+ LER F + Y RE LA +L
Sbjct: 1109 RRTRTTFNQFQLDTLERAFSRTHYPDVLLREQLAVYTNL 1147
>SB_11862| Best HMM Match : Homeobox (HMM E-Value=1.1e-16)
Length = 99
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 37 LERRFKQQKYLSAPEREHLASLIHLTPTQ 65
LE+ F +QKYL + R LA ++ L Q
Sbjct: 4 LEKTFSEQKYLDSTNRAKLAQILGLNEAQ 32
>SB_21212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 249
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
R++R FT Q+ +E F +Y +RE LA I ++ ++
Sbjct: 78 RRKRTTFTHDQLQLMEAYFHNNRYPGIEQREGLAEKIQVSESR 120
>SB_53345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 27.9 bits (59), Expect = 2.0
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
Query: 4 LAACAGPDAKPMQFPLAQRRKRRVLFTQAQVYELERRFKQQKY--LSAPEREHLASLIHL 61
+A G D KP++ P Q K Q + R +Q+ Y +S R LASLI L
Sbjct: 1 MADTEGEDEKPLKLPQEQDVKEE---KQEDLPPRGRLDRQRSYSTVSLAARSKLASLIEL 57
Query: 62 TPTQFHNGPVDN 73
G DN
Sbjct: 58 ANEATEGGHADN 69
>SB_17653| Best HMM Match : RCSD (HMM E-Value=5.1)
Length = 281
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 51 EREHLASLIHLTPTQFHNGPVDN 73
ER HLA +++L P+ FH V N
Sbjct: 52 ERRHLAQIVNLMPSAFHVQQVRN 74
>SB_10426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHL 61
R+ R FT Q+ LE+ F + Y RE LA+ +L
Sbjct: 68 RRTRTAFTHQQLTALEKVFSKTHYPDVEVREQLATSTNL 106
>SB_16524| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 33 QVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
Q Y+L + KQ ++ P RE++A+L+ TP++
Sbjct: 587 QRYQLAVQAKQLTSITKPFRENIAALVFYTPSK 619
>SB_16224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1127
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 51 EREHLASLIHLTPTQFHNGPVDN 73
ER HLA +++L P+ FH V N
Sbjct: 736 ERRHLAQIVNLMPSAFHVQQVRN 758
>SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09)
Length = 1103
Score = 27.5 bits (58), Expect = 2.6
Identities = 10/39 (25%), Positives = 23/39 (58%)
Query: 14 PMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPER 52
P Q+P+ Q ++ + Q Q Y +R++ Q+ ++ P++
Sbjct: 969 PQQYPMLQPYPQQQPYPQQQPYPQQRQYAGQQMVACPQQ 1007
>SB_5296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 22 RRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLA 56
+R+ R FT Q+ +LE +++ KY RE LA
Sbjct: 220 QRRNRTKFTAYQLEQLEDAYQKAKYPDVQARETLA 254
>SB_48493| Best HMM Match : Homeobox (HMM E-Value=6.3e-08)
Length = 121
Score = 27.1 bits (57), Expect = 3.5
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 8 AGPDAKPMQFP---LAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLA 56
A P + P FP + +RR+ R F Q+ LE F Q Y ER+ LA
Sbjct: 7 ANPPSAPA-FPHTAVTRRRRVRTSFADWQLCALESAFAQTHYPPIYERDQLA 57
>SB_45588| Best HMM Match : Arg_repressor_C (HMM E-Value=7.7)
Length = 271
Score = 26.6 bits (56), Expect = 4.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 6 ACAGPDAKPMQFPLAQRRKRRVLFTQAQVYEL 37
+CAGPD +Q P + + T Q+Y+L
Sbjct: 186 SCAGPDITDIQTPNTVKGLAASVLTHCQIYKL 217
>SB_28281| Best HMM Match : Pou (HMM E-Value=0)
Length = 250
Score = 26.6 bits (56), Expect = 4.6
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 16 QFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHL 61
+F +RRKRR A LE F +Q S+PE +A + L
Sbjct: 171 KFGAERRRKRRTTIGLAAKEALENHFMKQTKPSSPEIVRIADGLRL 216
>SB_45599| Best HMM Match : GRP (HMM E-Value=0.22)
Length = 595
Score = 26.6 bits (56), Expect = 4.6
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Query: 2 GGLAACAGPDAKPMQFPLAQRRKRRVLFTQAQV--YELERRFKQQKYLSAP 50
G A P P+Q PL RR+ + + Q YELERR+ ++ + P
Sbjct: 253 GDWTVIAVPQQGPVQLPLG----RRLAWAEGQRRRYELERRYNERLGIEPP 299
>SB_51509| Best HMM Match : Homeobox (HMM E-Value=2.3e-09)
Length = 53
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 19 LAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHL 61
L +RR+ R F Q+ ELE+ + +Y RE LA + L
Sbjct: 5 LPKRRRSRTNFDSWQLEELEKIYHHNQYPDVFTREALALKLDL 47
>SB_41749| Best HMM Match : Homeobox (HMM E-Value=4.1e-29)
Length = 269
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
++ R F +AQ++++ER F Y R L+ L+ +Q
Sbjct: 75 KRYRATFDKAQIFQMERVFLLNHYPDVAARSELSRRTGLSESQ 117
>SB_39161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2103
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 19 LAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHL 61
L +RR+ R F Q+ ELE+ + +Y RE LA + L
Sbjct: 317 LPKRRRSRTNFDSWQLEELEKIYHHNQYPDVFTREALALKLDL 359
>SB_57795| Best HMM Match : Homeobox (HMM E-Value=0.14)
Length = 44
Score = 26.2 bits (55), Expect = 6.1
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 19 LAQRRKRRVLFTQAQVYELERRFKQQKYL 47
L + ++ R +FT Q+ +E+ F Q+Y+
Sbjct: 11 LEKPKRMRTIFTMEQLERMEKEFAHQQYM 39
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.321 0.137 0.417
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,075,483
Number of Sequences: 59808
Number of extensions: 153735
Number of successful extensions: 339
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 246
Number of HSP's gapped (non-prelim): 95
length of query: 112
length of database: 16,821,457
effective HSP length: 73
effective length of query: 39
effective length of database: 12,455,473
effective search space: 485763447
effective search space used: 485763447
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 54 (25.8 bits)
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