Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000762-TA|BGIBMGA000762-PA|IPR001356|Homeobox,
IPR009057|Homeodomain-like
(112 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79757-1|CAB60999.1| 299|Caenorhabditis elegans Hypothetical pr... 81 1e-16
AF026056-1|AAB81844.1| 298|Caenorhabditis elegans NK-2 class ho... 81 1e-16
Z73974-7|CAL90892.1| 283|Caenorhabditis elegans Hypothetical pr... 75 2e-14
Z73974-6|CAL90891.1| 215|Caenorhabditis elegans Hypothetical pr... 75 2e-14
Z73974-5|CAA98272.1| 346|Caenorhabditis elegans Hypothetical pr... 75 2e-14
U10081-1|AAA20841.1| 346|Caenorhabditis elegans CEH-22 homeopro... 75 2e-14
U10080-1|AAA20840.1| 346|Caenorhabditis elegans CEH-22 homeopro... 75 2e-14
Z77133-5|CAB00867.3| 232|Caenorhabditis elegans Hypothetical pr... 60 4e-10
AY205144-1|AAO46042.1| 156|Caenorhabditis elegans NK-2 family h... 60 4e-10
Z81085-1|CAB03112.3| 263|Caenorhabditis elegans Hypothetical pr... 55 1e-08
U55856-2|AAA98021.1| 197|Caenorhabditis elegans Touch abnormal ... 51 2e-07
U49944-3|AAM51525.1| 341|Caenorhabditis elegans Mesodermal line... 47 3e-06
AC024847-9|AAR30201.1| 147|Caenorhabditis elegans C.elegans hom... 46 5e-06
X52811-1|CAB57217.1| 60|Caenorhabditis elegans protein ( Caeno... 46 6e-06
U64600-5|AAK39202.2| 223|Caenorhabditis elegans C.elegans homeo... 46 6e-06
U64600-4|AAK39201.1| 299|Caenorhabditis elegans C.elegans homeo... 46 8e-06
Z82279-3|CAD62039.1| 106|Caenorhabditis elegans Hypothetical pr... 44 2e-05
Z82279-2|CAB05260.2| 256|Caenorhabditis elegans Hypothetical pr... 44 2e-05
AY151210-1|AAN72827.1| 106|Caenorhabditis elegans COG-1B protein. 44 2e-05
AY151209-1|AAN72826.1| 256|Caenorhabditis elegans COG-1A protein. 44 2e-05
L19249-1|AAC37167.1| 303|Caenorhabditis elegans homeobox protei... 40 3e-04
L14429-3|AAA28218.1| 305|Caenorhabditis elegans C.elegans homeo... 40 3e-04
AL033514-1|CAA22081.2| 275|Caenorhabditis elegans Hypothetical ... 40 4e-04
AF172092-1|AAD48876.1| 275|Caenorhabditis elegans homeodomain p... 40 4e-04
Z48621-10|CAA88539.1| 225|Caenorhabditis elegans Hypothetical p... 39 7e-04
X52810-1|CAB57215.1| 67|Caenorhabditis elegans protein ( Caeno... 39 7e-04
U55376-2|AAA98004.1| 132|Caenorhabditis elegans C.elegans homeo... 39 7e-04
AF286218-1|AAF88063.1| 225|Caenorhabditis elegans VAB-15 protein. 39 7e-04
AF039720-2|AAB96698.1| 180|Caenorhabditis elegans C.elegans hom... 39 7e-04
AY246429-1|AAO91836.1| 209|Caenorhabditis elegans homeodomain p... 38 0.001
AY246428-1|AAO91835.1| 209|Caenorhabditis elegans homeodomain p... 38 0.001
AF003137-4|AAB93639.2| 209|Caenorhabditis elegans C.elegans hom... 38 0.001
Z66494-8|CAA91264.1| 84|Caenorhabditis elegans Hypothetical pr... 38 0.002
AF091459-1|AAC36745.1| 84|Caenorhabditis elegans homeodomain p... 38 0.002
M22751-1|AAA28106.1| 211|Caenorhabditis elegans protein ( C.ele... 37 0.003
L15201-2|AAA27945.2| 200|Caenorhabditis elegans Male abnormal p... 37 0.003
AL132853-1|CAB60440.1| 234|Caenorhabditis elegans Hypothetical ... 37 0.003
AF277990-1|AAG00458.1| 200|Caenorhabditis elegans MAB-5 protein. 37 0.003
Z32680-4|CAA83601.1| 273|Caenorhabditis elegans Hypothetical pr... 36 0.005
AJ312288-1|CAC41972.1| 278|Caenorhabditis elegans putative tran... 36 0.005
M72149-1|AAA28063.1| 60|Caenorhabditis elegans ceh-15 protein. 36 0.009
Z73428-3|CAA97809.1| 247|Caenorhabditis elegans Hypothetical pr... 35 0.015
X96636-1|CAA65441.1| 263|Caenorhabditis elegans vab-7 protein. 35 0.015
U56860-2|AAA98706.3| 225|Caenorhabditis elegans Defective phary... 35 0.015
AY766389-1|AAV34757.1| 170|Caenorhabditis elegans PHA-2 protein. 35 0.015
AF272397-1|AAF76229.1| 237|Caenorhabditis elegans CEH-17 protein. 35 0.015
AF003151-5|AAK18908.1| 237|Caenorhabditis elegans C.elegans hom... 35 0.015
L19639-1|AAC37168.1| 253|Caenorhabditis elegans homeobox protei... 34 0.020
L19248-1|AAB04137.1| 253|Caenorhabditis elegans homeobox protei... 34 0.020
AC006605-9|AAK85445.1| 253|Caenorhabditis elegans Abnormal cell... 34 0.020
Z81036-5|CAB02740.2| 134|Caenorhabditis elegans Hypothetical pr... 33 0.035
X52812-1|CAB57216.1| 66|Caenorhabditis elegans protein ( Caeno... 33 0.046
U50184-2|AAB93323.1| 344|Caenorhabditis elegans C.elegans homeo... 33 0.046
U19995-1|AAA93063.1| 344|Caenorhabditis elegans ceh-10 protein. 33 0.046
Z70780-17|CAA94830.3| 264|Caenorhabditis elegans Hypothetical p... 33 0.061
Z70754-11|CAA94780.3| 264|Caenorhabditis elegans Hypothetical p... 33 0.061
Z49937-5|CAC42288.1| 296|Caenorhabditis elegans Hypothetical pr... 31 0.14
Z49937-4|CAC42287.1| 269|Caenorhabditis elegans Hypothetical pr... 31 0.14
Z49937-3|CAA90186.2| 455|Caenorhabditis elegans Hypothetical pr... 31 0.14
X17077-1|CAA34929.1| 202|Caenorhabditis elegans ceh-13 homeodom... 31 0.14
U31537-2|AAA82992.1| 261|Caenorhabditis elegans male abnormal-1... 31 0.14
U31537-1|AAA82991.1| 455|Caenorhabditis elegans variable abnorm... 31 0.14
U29184-1|AAC47542.1| 296|Caenorhabditis elegans MAB-18 protein. 31 0.14
U29145-1|AAC47541.1| 284|Caenorhabditis elegans MAB-18 protein. 31 0.14
AC006679-1|AAK84466.1| 202|Caenorhabditis elegans C.elegans hom... 31 0.14
L19247-1|AAC37166.1| 223|Caenorhabditis elegans homeobox protei... 31 0.25
L15201-6|AAP82660.1| 222|Caenorhabditis elegans Egg laying defe... 31 0.25
L15201-5|AAA27943.2| 219|Caenorhabditis elegans Egg laying defe... 31 0.25
L15201-4|AAN84878.1| 223|Caenorhabditis elegans Egg laying defe... 31 0.25
Z73422-5|CAE54882.1| 323|Caenorhabditis elegans Hypothetical pr... 30 0.33
Z73422-4|CAA97770.1| 319|Caenorhabditis elegans Hypothetical pr... 30 0.33
L37867-1|AAA63155.1| 319|Caenorhabditis elegans homeodomain pro... 30 0.33
X17075-1|CAA34927.1| 75|Caenorhabditis elegans ceh-11 protein. 29 0.57
Z95559-3|CAB08998.1| 786|Caenorhabditis elegans Hypothetical pr... 29 0.76
EF219472-1|ABO25756.1| 127|Caenorhabditis elegans transcription... 29 1.00
AF024499-7|AAB70358.3| 733|Caenorhabditis elegans Hypothetical ... 29 1.00
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ... 28 1.7
Z47072-1|CAA87368.1| 252|Caenorhabditis elegans Hypothetical pr... 27 3.0
X64904-1|CAA46108.1| 184|Caenorhabditis elegans unc-4 protein. 27 3.0
U41017-5|AAC48216.2| 495|Caenorhabditis elegans C.elegans homeo... 27 3.0
AJ427855-1|CAD20808.1| 495|Caenorhabditis elegans CEH-21 protei... 27 3.0
AF023470-1|AAB86814.1| 183|Caenorhabditis elegans CEH-21 protein. 27 3.0
U88165-8|AAK21391.1| 581|Caenorhabditis elegans Hypothetical pr... 26 5.3
U41017-6|AAC48215.1| 399|Caenorhabditis elegans C.elegans homeo... 26 5.3
AL033514-2|CAA22093.2| 233|Caenorhabditis elegans Hypothetical ... 26 5.3
AF172091-1|AAD48875.1| 233|Caenorhabditis elegans NOB-1B protei... 26 5.3
Z70287-7|CAA94303.2| 198|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z81132-1|CAB03430.1| 361|Caenorhabditis elegans Hypothetical pr... 25 9.3
Z81117-4|CAB03319.1| 249|Caenorhabditis elegans Hypothetical pr... 25 9.3
AL033514-3|CAC70124.1| 218|Caenorhabditis elegans Hypothetical ... 25 9.3
AL031620-3|CAA20928.1| 310|Caenorhabditis elegans Hypothetical ... 25 9.3
AF172090-1|AAD48874.1| 218|Caenorhabditis elegans homeodomain p... 25 9.3
>Z79757-1|CAB60999.1| 299|Caenorhabditis elegans Hypothetical
protein F55B12.1 protein.
Length = 299
Score = 81.4 bits (192), Expect = 1e-16
Identities = 38/47 (80%), Positives = 43/47 (91%)
Query: 19 LAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
++QRRKRRVLF+QAQVYELERRFKQ KYL+APERE LA+ I LTPTQ
Sbjct: 147 MSQRRKRRVLFSQAQVYELERRFKQAKYLTAPEREQLANSIRLTPTQ 193
>AF026056-1|AAB81844.1| 298|Caenorhabditis elegans NK-2 class
homeodomain protein protein.
Length = 298
Score = 81.4 bits (192), Expect = 1e-16
Identities = 38/47 (80%), Positives = 43/47 (91%)
Query: 19 LAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
++QRRKRRVLF+QAQVYELERRFKQ KYL+APERE LA+ I LTPTQ
Sbjct: 147 MSQRRKRRVLFSQAQVYELERRFKQAKYLTAPEREQLANSIRLTPTQ 193
>Z73974-7|CAL90892.1| 283|Caenorhabditis elegans Hypothetical
protein F29F11.5c protein.
Length = 283
Score = 74.5 bits (175), Expect = 2e-14
Identities = 35/45 (77%), Positives = 39/45 (86%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
++RKRRVLFT+AQ YELERRF+ QKYLSAPERE LA I LTPTQ
Sbjct: 125 KKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQ 169
>Z73974-6|CAL90891.1| 215|Caenorhabditis elegans Hypothetical
protein F29F11.5b protein.
Length = 215
Score = 74.5 bits (175), Expect = 2e-14
Identities = 35/45 (77%), Positives = 39/45 (86%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
++RKRRVLFT+AQ YELERRF+ QKYLSAPERE LA I LTPTQ
Sbjct: 57 KKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQ 101
>Z73974-5|CAA98272.1| 346|Caenorhabditis elegans Hypothetical
protein F29F11.5a protein.
Length = 346
Score = 74.5 bits (175), Expect = 2e-14
Identities = 35/45 (77%), Positives = 39/45 (86%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
++RKRRVLFT+AQ YELERRF+ QKYLSAPERE LA I LTPTQ
Sbjct: 188 KKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQ 232
>U10081-1|AAA20841.1| 346|Caenorhabditis elegans CEH-22
homeoprotein protein.
Length = 346
Score = 74.5 bits (175), Expect = 2e-14
Identities = 35/45 (77%), Positives = 39/45 (86%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
++RKRRVLFT+AQ YELERRF+ QKYLSAPERE LA I LTPTQ
Sbjct: 188 KKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQ 232
>U10080-1|AAA20840.1| 346|Caenorhabditis elegans CEH-22
homeoprotein protein.
Length = 346
Score = 74.5 bits (175), Expect = 2e-14
Identities = 35/45 (77%), Positives = 39/45 (86%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
++RKRRVLFT+AQ YELERRF+ QKYLSAPERE LA I LTPTQ
Sbjct: 188 KKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQ 232
>Z77133-5|CAB00867.3| 232|Caenorhabditis elegans Hypothetical
protein K03A11.3 protein.
Length = 232
Score = 60.1 bits (139), Expect = 4e-10
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
Q+RK RVLFTQ QV ELE RFK+Q+Y++A ERE LA + LT TQ
Sbjct: 134 QKRKPRVLFTQHQVNELEERFKKQRYVTATEREELAQCLGLTATQ 178
>AY205144-1|AAO46042.1| 156|Caenorhabditis elegans NK-2 family
homeodomain factorCEH-28 protein.
Length = 156
Score = 60.1 bits (139), Expect = 4e-10
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
Q+RK RVLFTQ QV ELE RFK+Q+Y++A ERE LA + LT TQ
Sbjct: 90 QKRKPRVLFTQHQVNELEERFKKQRYVTATEREELAQCLGLTATQ 134
>Z81085-1|CAB03112.3| 263|Caenorhabditis elegans Hypothetical
protein F46F3.1 protein.
Length = 263
Score = 54.8 bits (126), Expect = 1e-08
Identities = 26/47 (55%), Positives = 36/47 (76%)
Query: 19 LAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+ RRKRRVLF+ QV+ LER+F+ +YLSA +RE+LA I+L+ TQ
Sbjct: 95 MISRRKRRVLFSPQQVHVLERKFQINRYLSAADRENLAKSINLSATQ 141
>U55856-2|AAA98021.1| 197|Caenorhabditis elegans Touch abnormal
protein 1 protein.
Length = 197
Score = 50.8 bits (116), Expect = 2e-07
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 22 RRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
RRK R +F+ Q+ LERRF+ Q+YLS PER LA+ ++L+ TQ
Sbjct: 120 RRKARTVFSDQQLQGLERRFESQRYLSTPERIELANALNLSETQ 163
>U49944-3|AAM51525.1| 341|Caenorhabditis elegans Mesodermal lineage
specificationprotein 2 protein.
Length = 341
Score = 47.2 bits (107), Expect = 3e-06
Identities = 20/45 (44%), Positives = 34/45 (75%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+++K R +F+++QV +LE F+ ++YLS+ ER +LA +HLT TQ
Sbjct: 200 RKKKTRTVFSRSQVSQLEMMFECKRYLSSQERSNLAQKLHLTETQ 244
>AC024847-9|AAR30201.1| 147|Caenorhabditis elegans C.elegans
homeobox protein 9 protein.
Length = 147
Score = 46.4 bits (105), Expect = 5e-06
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+R+K R F+ QV+ELE++F+ +KYLS+ +R LA + +T TQ
Sbjct: 69 KRKKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQ 113
>X52811-1|CAB57217.1| 60|Caenorhabditis elegans protein (
Caenorhabditis elegansceh-9 gene, unknown homeobox. ).
Length = 60
Score = 46.0 bits (104), Expect = 6e-06
Identities = 20/44 (45%), Positives = 31/44 (70%)
Query: 22 RRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
R+K R F+ QV+ELE++F+ +KYLS+ +R LA + +T TQ
Sbjct: 1 RKKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQ 44
>U64600-5|AAK39202.2| 223|Caenorhabditis elegans C.elegans
homeobox protein 31 protein.
Length = 223
Score = 46.0 bits (104), Expect = 6e-06
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQFHN---GPVDNLRR 76
RK R +FT Q+ ELE F++QKYLS +R LA + LT TQ G NLR+
Sbjct: 39 RKARTIFTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTDTQIGAATLGGAKNLRK 95
>U64600-4|AAK39201.1| 299|Caenorhabditis elegans C.elegans homeobox
protein 30 protein.
Length = 299
Score = 45.6 bits (103), Expect = 8e-06
Identities = 25/61 (40%), Positives = 33/61 (54%)
Query: 5 AACAGPDAKPMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPT 64
A+ G D + RK R +FT Q+ ELE F++QKYLS +R LA + LT T
Sbjct: 140 ASSPGGDRMGSPGSCKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDT 199
Query: 65 Q 65
Q
Sbjct: 200 Q 200
>Z82279-3|CAD62039.1| 106|Caenorhabditis elegans Hypothetical
protein R03C1.3b protein.
Length = 106
Score = 44.4 bits (100), Expect = 2e-05
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
Q+++ R FT Q+Y+LER+F+Q KYL+ +R LA ++++ +Q
Sbjct: 18 QKKQSRPTFTGHQIYQLERKFEQTKYLAGADRAQLAQELNMSESQ 62
>Z82279-2|CAB05260.2| 256|Caenorhabditis elegans Hypothetical
protein R03C1.3a protein.
Length = 256
Score = 44.4 bits (100), Expect = 2e-05
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
Q+++ R FT Q+Y+LER+F+Q KYL+ +R LA ++++ +Q
Sbjct: 168 QKKQSRPTFTGHQIYQLERKFEQTKYLAGADRAQLAQELNMSESQ 212
>AY151210-1|AAN72827.1| 106|Caenorhabditis elegans COG-1B
protein.
Length = 106
Score = 44.4 bits (100), Expect = 2e-05
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
Q+++ R FT Q+Y+LER+F+Q KYL+ +R LA ++++ +Q
Sbjct: 18 QKKQSRPTFTGHQIYQLERKFEQTKYLAGADRAQLAQELNMSESQ 62
>AY151209-1|AAN72826.1| 256|Caenorhabditis elegans COG-1A protein.
Length = 256
Score = 44.4 bits (100), Expect = 2e-05
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
Q+++ R FT Q+Y+LER+F+Q KYL+ +R LA ++++ +Q
Sbjct: 168 QKKQSRPTFTGHQIYQLERKFEQTKYLAGADRAQLAQELNMSESQ 212
>L19249-1|AAC37167.1| 303|Caenorhabditis elegans homeobox protein
protein.
Length = 303
Score = 40.3 bits (90), Expect = 3e-04
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 20 AQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
A RK R ++ Q +LE FK Q Y+ ERE+LA + L+P+Q
Sbjct: 207 ANHRKARTIYGTTQTQQLEDMFKGQMYVVGAERENLAQRLGLSPSQ 252
>L14429-3|AAA28218.1| 305|Caenorhabditis elegans C.elegans homeobox
protein 23 protein.
Length = 305
Score = 40.3 bits (90), Expect = 3e-04
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 20 AQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
A RK R ++ Q +LE FK Q Y+ ERE+LA + L+P+Q
Sbjct: 209 ANHRKARTIYGTTQTQQLEDMFKGQMYVVGAERENLAQRLGLSPSQ 254
>AL033514-1|CAA22081.2| 275|Caenorhabditis elegans Hypothetical
protein Y75B8A.1 protein.
Length = 275
Score = 39.9 bits (89), Expect = 4e-04
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
RK+R +T+AQ ELE+ F Y+S +R LA +HLT Q
Sbjct: 200 RKKRKPYTKAQTLELEKEFLYNTYVSKQKRWELAKYLHLTERQ 242
>AF172092-1|AAD48876.1| 275|Caenorhabditis elegans homeodomain
protein PHP-3 protein.
Length = 275
Score = 39.9 bits (89), Expect = 4e-04
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
RK+R +T+AQ ELE+ F Y+S +R LA +HLT Q
Sbjct: 200 RKKRKPYTKAQTLELEKEFLYNTYVSKQKRWELAKYLHLTERQ 242
>Z48621-10|CAA88539.1| 225|Caenorhabditis elegans Hypothetical
protein R07B1.1 protein.
Length = 225
Score = 39.1 bits (87), Expect = 7e-04
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
RK R F+ Q+ LER+F+ ++YLS ER ++ + LT TQ
Sbjct: 130 RKPRTPFSTQQLISLERKFQSKQYLSIAERAEFSASLQLTETQ 172
>X52810-1|CAB57215.1| 67|Caenorhabditis elegans protein (
Caenorhabditis elegansceh-1 gene, unknown homeobox. ).
Length = 67
Score = 39.1 bits (87), Expect = 7e-04
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
R+ R FT Q+ LE +FK +YLS ER +LA + L+ TQ
Sbjct: 2 RRARTAFTYEQLVALENKFKTSRYLSVVERLNLAIQLQLSETQ 44
>U55376-2|AAA98004.1| 132|Caenorhabditis elegans C.elegans
homeobox protein 1 protein.
Length = 132
Score = 39.1 bits (87), Expect = 7e-04
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
R+ R FT Q+ LE +FK +YLS ER +LA + L+ TQ
Sbjct: 2 RRARTAFTYEQLVALENKFKTSRYLSVVERLNLAIQLQLSETQ 44
>AF286218-1|AAF88063.1| 225|Caenorhabditis elegans VAB-15 protein.
Length = 225
Score = 39.1 bits (87), Expect = 7e-04
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
RK R F+ Q+ LER+F+ ++YLS ER ++ + LT TQ
Sbjct: 130 RKPRTPFSTQQLISLERKFQSKQYLSIAERAEFSASLQLTETQ 172
>AF039720-2|AAB96698.1| 180|Caenorhabditis elegans C.elegans
homeobox protein 12 protein.
Length = 180
Score = 39.1 bits (87), Expect = 7e-04
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
R+ R F+ Q+ +LE++F +YLS P R LA + L+ TQ
Sbjct: 111 RRPRTAFSSEQLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQ 153
>AY246429-1|AAO91836.1| 209|Caenorhabditis elegans homeodomain
protein CEH-2 protein.
Length = 209
Score = 38.3 bits (85), Expect = 0.001
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 18 PLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
PL + ++ R F+ +Q+ +LE+ F+ Y+ ER+ LA+ + LT TQ
Sbjct: 122 PLRKNKRIRTAFSASQLIQLEKAFEGNHYVVGNERKQLAAKLSLTETQ 169
>AY246428-1|AAO91835.1| 209|Caenorhabditis elegans homeodomain
protein CEH-2 protein.
Length = 209
Score = 38.3 bits (85), Expect = 0.001
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 18 PLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
PL + ++ R F+ +Q+ +LE+ F+ Y+ ER+ LA+ + LT TQ
Sbjct: 122 PLRKNKRIRTAFSASQLIQLEKAFEGNHYVVGNERKQLAAKLSLTETQ 169
>AF003137-4|AAB93639.2| 209|Caenorhabditis elegans C.elegans
homeobox protein 2 protein.
Length = 209
Score = 38.3 bits (85), Expect = 0.001
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 18 PLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
PL + ++ R F+ +Q+ +LE+ F+ Y+ ER+ LA+ + LT TQ
Sbjct: 122 PLRKNKRIRTAFSASQLIQLEKAFEGNHYVVGNERKQLAAKLSLTETQ 169
>Z66494-8|CAA91264.1| 84|Caenorhabditis elegans Hypothetical
protein C34C6.8 protein.
Length = 84
Score = 37.5 bits (83), Expect = 0.002
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 24 KRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+RR FT Q+Y LE F Q +Y+ ERE LA ++ L Q
Sbjct: 25 RRRTTFTVEQLYLLEMYFAQSQYVGCDERERLARILSLDEYQ 66
>AF091459-1|AAC36745.1| 84|Caenorhabditis elegans homeodomain
protein CEH-7 protein.
Length = 84
Score = 37.5 bits (83), Expect = 0.002
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 24 KRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+RR FT Q+Y LE F Q +Y+ ERE LA ++ L Q
Sbjct: 25 RRRTTFTVEQLYLLEMYFAQSQYVGCDERERLARILSLDEYQ 66
>M22751-1|AAA28106.1| 211|Caenorhabditis elegans protein (
C.elegans DNA-bindingprotein (mab5) mRNA, 3' end. ).
Length = 211
Score = 37.1 bits (82), Expect = 0.003
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+ ++ R ++++Q ELE+ F KYL+ R+ ++ +HLT Q
Sbjct: 127 ESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQ 171
>L15201-2|AAA27945.2| 200|Caenorhabditis elegans Male abnormal
protein 5 protein.
Length = 200
Score = 37.1 bits (82), Expect = 0.003
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+ ++ R ++++Q ELE+ F KYL+ R+ ++ +HLT Q
Sbjct: 116 ESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQ 160
>AL132853-1|CAB60440.1| 234|Caenorhabditis elegans Hypothetical
protein Y80D3A.3 protein.
Length = 234
Score = 37.1 bits (82), Expect = 0.003
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 18 PLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
P +RR R F+ +Q+Y L RF+Q + ER L ++I L+P Q
Sbjct: 143 PSEKRRGARTPFSDSQLYALRTRFEQCDTIKVDERRKLGAVIGLSPEQ 190
>AF277990-1|AAG00458.1| 200|Caenorhabditis elegans MAB-5 protein.
Length = 200
Score = 37.1 bits (82), Expect = 0.003
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+ ++ R ++++Q ELE+ F KYL+ R+ ++ +HLT Q
Sbjct: 116 ESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQ 160
>Z32680-4|CAA83601.1| 273|Caenorhabditis elegans Hypothetical
protein C28A5.4 protein.
Length = 273
Score = 36.3 bits (80), Expect = 0.005
Identities = 15/43 (34%), Positives = 29/43 (67%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
RK R ++ +Q+ L+++F++ +YL+ P+R LA + L+ TQ
Sbjct: 103 RKPRTIYNSSQLQMLQKKFQKTQYLALPDRAALAHELGLSQTQ 145
>AJ312288-1|CAC41972.1| 278|Caenorhabditis elegans putative
transcription factor protein.
Length = 278
Score = 36.3 bits (80), Expect = 0.005
Identities = 15/43 (34%), Positives = 29/43 (67%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
RK R ++ +Q+ L+++F++ +YL+ P+R LA + L+ TQ
Sbjct: 108 RKPRTIYNSSQLQMLQKKFQKTQYLALPDRAALAHELGLSQTQ 150
>M72149-1|AAA28063.1| 60|Caenorhabditis elegans ceh-15 protein.
Length = 60
Score = 35.5 bits (78), Expect = 0.009
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQFHN 68
+++R +T+ QV ELE+ F KYL+ R +A + LT Q N
Sbjct: 2 KRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQGQN 47
>Z73428-3|CAA97809.1| 247|Caenorhabditis elegans Hypothetical
protein M142.4 protein.
Length = 247
Score = 34.7 bits (76), Expect = 0.015
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 1 MGGLAACAGPDAKPMQFPL-----AQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHL 55
MG +AA A A P Q R+ R F++ Q+ LER F ++ Y+S R L
Sbjct: 42 MGVVAAAAAAAAAGRHHPYDNRDDGQMRRYRTAFSREQIGRLEREFAKENYVSRKTRGEL 101
Query: 56 ASLIHL 61
A+ ++L
Sbjct: 102 AAELNL 107
>X96636-1|CAA65441.1| 263|Caenorhabditis elegans vab-7 protein.
Length = 263
Score = 34.7 bits (76), Expect = 0.015
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 1 MGGLAACAGPDAKPMQFPL-----AQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHL 55
MG +AA A A P Q R+ R F++ Q+ LER F ++ Y+S R L
Sbjct: 58 MGVVAAAAAAAAAGRHHPYDNRDDGQMRRYRTAFSREQIGRLEREFAKENYVSRKTRGEL 117
Query: 56 ASLIHL 61
A+ ++L
Sbjct: 118 AAELNL 123
>U56860-2|AAA98706.3| 225|Caenorhabditis elegans Defective pharynx
development protein2 protein.
Length = 225
Score = 34.7 bits (76), Expect = 0.015
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+R+ ++ FT Q LE +F KYLS ER+ LA + L+ Q
Sbjct: 134 KRKGGQIRFTNEQTDALEHKFDSHKYLSPQERKKLAKSLSLSERQ 178
>AY766389-1|AAV34757.1| 170|Caenorhabditis elegans PHA-2 protein.
Length = 170
Score = 34.7 bits (76), Expect = 0.015
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+R+ ++ FT Q LE +F KYLS ER+ LA + L+ Q
Sbjct: 79 KRKGGQIRFTNEQTDALEHKFDSHKYLSPQERKKLAKSLSLSERQ 123
>AF272397-1|AAF76229.1| 237|Caenorhabditis elegans CEH-17 protein.
Length = 237
Score = 34.7 bits (76), Expect = 0.015
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 1 MGGLAACAGPDAKPMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIH 60
+G L + G P + ++R+ R FT Q+ ELER F + Y RE +A I
Sbjct: 130 VGALCSTGGAPLNPAE--RRKQRRIRTTFTSGQLKELERSFCETHYPDIYTREEIAMRID 187
Query: 61 LT 62
LT
Sbjct: 188 LT 189
>AF003151-5|AAK18908.1| 237|Caenorhabditis elegans C.elegans
homeobox protein 17 protein.
Length = 237
Score = 34.7 bits (76), Expect = 0.015
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 1 MGGLAACAGPDAKPMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIH 60
+G L + G P + ++R+ R FT Q+ ELER F + Y RE +A I
Sbjct: 130 VGALCSTGGAPLNPAE--RRKQRRIRTTFTSGQLKELERSFCETHYPDIYTREEIAMRID 187
Query: 61 LT 62
LT
Sbjct: 188 LT 189
>L19639-1|AAC37168.1| 253|Caenorhabditis elegans homeobox protein
protein.
Length = 253
Score = 34.3 bits (75), Expect = 0.020
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+++R +T+ QV ELE+ F KYL+ R +A + LT Q
Sbjct: 166 KRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQ 208
>L19248-1|AAB04137.1| 253|Caenorhabditis elegans homeobox protein
protein.
Length = 253
Score = 34.3 bits (75), Expect = 0.020
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+++R +T+ QV ELE+ F KYL+ R +A + LT Q
Sbjct: 166 KRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQ 208
>AC006605-9|AAK85445.1| 253|Caenorhabditis elegans Abnormal cell
lineage protein 39 protein.
Length = 253
Score = 34.3 bits (75), Expect = 0.020
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+++R +T+ QV ELE+ F KYL+ R +A + LT Q
Sbjct: 166 KRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQ 208
>Z81036-5|CAB02740.2| 134|Caenorhabditis elegans Hypothetical
protein C16C2.1 protein.
Length = 134
Score = 33.5 bits (73), Expect = 0.035
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 14 PMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
P + L + ++ R +FT Q+ +LE F YLS R LA + L+ Q
Sbjct: 27 PAKLDLERPKRPRTVFTDEQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQ 78
>X52812-1|CAB57216.1| 66|Caenorhabditis elegans protein (
Caenorhabditis elegansceh-10 gene, unknown homeobox. ).
Length = 66
Score = 33.1 bits (72), Expect = 0.046
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHL 61
++R+ R +FTQ Q+ ELE+ F+ Y RE LA L
Sbjct: 6 KKRRHRTIFTQYQIDELEKAFQDSHYPDIYAREVLAGKTEL 46
>U50184-2|AAB93323.1| 344|Caenorhabditis elegans C.elegans homeobox
protein 10 protein.
Length = 344
Score = 33.1 bits (72), Expect = 0.046
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHL 61
++R+ R +FTQ Q+ ELE+ F+ Y RE LA L
Sbjct: 135 KKRRHRTIFTQYQIDELEKAFQDSHYPDIYAREVLAGKTEL 175
>U19995-1|AAA93063.1| 344|Caenorhabditis elegans ceh-10 protein.
Length = 344
Score = 33.1 bits (72), Expect = 0.046
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHL 61
++R+ R +FTQ Q+ ELE+ F+ Y RE LA L
Sbjct: 135 KKRRHRTIFTQYQIDELEKAFQDSHYPDIYAREVLAGKTEL 175
>Z70780-17|CAA94830.3| 264|Caenorhabditis elegans Hypothetical
protein F58E6.10 protein.
Length = 264
Score = 32.7 bits (71), Expect = 0.061
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 22 RRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHL 61
RR+ R FTQ Q+ EL+ F++ Y RE LA + L
Sbjct: 85 RRRHRTTFTQEQLQELDAAFQKSHYPDIYVREELARITKL 124
>Z70754-11|CAA94780.3| 264|Caenorhabditis elegans Hypothetical
protein F58E6.10 protein.
Length = 264
Score = 32.7 bits (71), Expect = 0.061
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 22 RRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHL 61
RR+ R FTQ Q+ EL+ F++ Y RE LA + L
Sbjct: 85 RRRHRTTFTQEQLQELDAAFQKSHYPDIYVREELARITKL 124
>Z49937-5|CAC42288.1| 296|Caenorhabditis elegans Hypothetical
protein F14F3.1c protein.
Length = 296
Score = 31.5 bits (68), Expect = 0.14
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHL 61
++ R FTQ Q+ LE+ F++ Y RE LA I L
Sbjct: 59 QRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQL 97
>Z49937-4|CAC42287.1| 269|Caenorhabditis elegans Hypothetical
protein F14F3.1b protein.
Length = 269
Score = 31.5 bits (68), Expect = 0.14
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHL 61
++ R FTQ Q+ LE+ F++ Y RE LA I L
Sbjct: 32 QRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQL 70
>Z49937-3|CAA90186.2| 455|Caenorhabditis elegans Hypothetical
protein F14F3.1a protein.
Length = 455
Score = 31.5 bits (68), Expect = 0.14
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHL 61
++ R FTQ Q+ LE+ F++ Y RE LA I L
Sbjct: 218 QRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQL 256
>X17077-1|CAA34929.1| 202|Caenorhabditis elegans ceh-13 homeodomain
protein protein.
Length = 202
Score = 31.5 bits (68), Expect = 0.14
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 12 AKPMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
A P + + + R FT Q+ ELE+ F KY++ R +AS + L Q
Sbjct: 104 AAPKKKVIDENGTNRTNFTTHQLTELEKEFHTAKYVNRTRRTEIASNLKLQEAQ 157
>U31537-2|AAA82992.1| 261|Caenorhabditis elegans male abnormal-18
protein.
Length = 261
Score = 31.5 bits (68), Expect = 0.14
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHL 61
++ R FTQ Q+ LE+ F++ Y RE LA I L
Sbjct: 24 QRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQL 62
>U31537-1|AAA82991.1| 455|Caenorhabditis elegans variable
abnormal-3 protein.
Length = 455
Score = 31.5 bits (68), Expect = 0.14
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHL 61
++ R FTQ Q+ LE+ F++ Y RE LA I L
Sbjct: 218 QRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQL 256
>U29184-1|AAC47542.1| 296|Caenorhabditis elegans MAB-18 protein.
Length = 296
Score = 31.5 bits (68), Expect = 0.14
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHL 61
++ R FTQ Q+ LE+ F++ Y RE LA I L
Sbjct: 59 QRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQL 97
>U29145-1|AAC47541.1| 284|Caenorhabditis elegans MAB-18 protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.14
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHL 61
++ R FTQ Q+ LE+ F++ Y RE LA I L
Sbjct: 47 QRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQL 85
>AC006679-1|AAK84466.1| 202|Caenorhabditis elegans C.elegans
homeobox protein 13 protein.
Length = 202
Score = 31.5 bits (68), Expect = 0.14
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 12 AKPMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
A P + + + R FT Q+ ELE+ F KY++ R +AS + L Q
Sbjct: 104 AAPKKKVIDENGTNRTNFTTHQLTELEKEFHTAKYVNRTRRTEIASNLKLQEAQ 157
>L19247-1|AAC37166.1| 223|Caenorhabditis elegans homeobox protein
protein.
Length = 223
Score = 30.7 bits (66), Expect = 0.25
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 20 AQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
A +K R + + Q LE +F+Q Y+S +RE L LT Q
Sbjct: 110 ASSKKGRQTYQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQ 155
>L15201-6|AAP82660.1| 222|Caenorhabditis elegans Egg laying
defective protein 5,isoform c protein.
Length = 222
Score = 30.7 bits (66), Expect = 0.25
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 20 AQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
A +K R + + Q LE +F+Q Y+S +RE L LT Q
Sbjct: 109 ASSKKGRQTYQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQ 154
>L15201-5|AAA27943.2| 219|Caenorhabditis elegans Egg laying
defective protein 5,isoform a protein.
Length = 219
Score = 30.7 bits (66), Expect = 0.25
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 20 AQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
A +K R + + Q LE +F+Q Y+S +RE L LT Q
Sbjct: 106 ASSKKGRQTYQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQ 151
>L15201-4|AAN84878.1| 223|Caenorhabditis elegans Egg laying
defective protein 5,isoform b protein.
Length = 223
Score = 30.7 bits (66), Expect = 0.25
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 20 AQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
A +K R + + Q LE +F+Q Y+S +RE L LT Q
Sbjct: 110 ASSKKGRQTYQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQ 155
>Z73422-5|CAE54882.1| 323|Caenorhabditis elegans Hypothetical
protein B0564.10b protein.
Length = 323
Score = 30.3 bits (65), Expect = 0.33
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLT 62
R++R FT Q+ ELE F + +Y RE +A I LT
Sbjct: 113 RRQRTHFTSHQLTELENWFSRNRYPDMACREEIAVWISLT 152
>Z73422-4|CAA97770.1| 319|Caenorhabditis elegans Hypothetical
protein B0564.10a protein.
Length = 319
Score = 30.3 bits (65), Expect = 0.33
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLT 62
R++R FT Q+ ELE F + +Y RE +A I LT
Sbjct: 113 RRQRTHFTSHQLTELENWFSRNRYPDMACREEIAVWISLT 152
>L37867-1|AAA63155.1| 319|Caenorhabditis elegans homeodomain
protein protein.
Length = 319
Score = 30.3 bits (65), Expect = 0.33
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLT 62
R++R FT Q+ ELE F + +Y RE +A I LT
Sbjct: 113 RRQRTHFTSHQLTELENWFSRNRYPDMACREEIAVWISLT 152
>X17075-1|CAA34927.1| 75|Caenorhabditis elegans ceh-11 protein.
Length = 75
Score = 29.5 bits (63), Expect = 0.57
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+K R + + Q LE +F+Q Y+S +RE L LT Q
Sbjct: 3 KKGRQTYQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQ 45
>Z95559-3|CAB08998.1| 786|Caenorhabditis elegans Hypothetical
protein Y41E3.4 protein.
Length = 786
Score = 29.1 bits (62), Expect = 0.76
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 10/81 (12%)
Query: 11 DAKPMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPE-----REHLASLIHLTPTQ 65
+A P +F +L T+A +++ FKQ Y++ P+ + H+A++ T+
Sbjct: 214 EASPEEFADGAETMDELLRTRAHFHKVGENFKQDGYVTTPKTAELLKAHVAAVGGKVVTR 273
Query: 66 FHNGP-----VDNLRRVNINF 81
F P + + + +NINF
Sbjct: 274 FPPEPNGVLHIGHAKAININF 294
>EF219472-1|ABO25756.1| 127|Caenorhabditis elegans transcription
factor PHA-2 protein.
Length = 127
Score = 28.7 bits (61), Expect = 1.00
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPER 52
+R+ ++ FT Q LE +F KYLS ER
Sbjct: 96 KRKGGQIRFTNEQTDALEHKFDSHKYLSPQER 127
>AF024499-7|AAB70358.3| 733|Caenorhabditis elegans Hypothetical
protein F42G2.6 protein.
Length = 733
Score = 28.7 bits (61), Expect = 1.00
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 DAKPMQFPLAQR---RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHL 61
D K ++ +A R K F+ ++ LE+ +++ KY+S+ + + ++ IHL
Sbjct: 212 DVKTTEYEVADRTDDEKNWSSFSYDAIHFLEQEYRKTKYISSTDCQKISEKIHL 265
>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
protein ZC123.3 protein.
Length = 1623
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 22 RRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTP 63
RR R FT Q+ L++ F +Q Y + E L+ + L+P
Sbjct: 1039 RRANRTRFTDFQLRTLQQFFDKQAYPKDDDLEALSKKLQLSP 1080
>Z47072-1|CAA87368.1| 252|Caenorhabditis elegans Hypothetical
protein F26C11.2 protein.
Length = 252
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 20 AQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHL 61
A+RR+ R F+ Q+ ELE F+ Y RE LA + L
Sbjct: 86 AKRRRTRTNFSGWQLEELESAFEASHYPDVFMREALAMRLDL 127
>X64904-1|CAA46108.1| 184|Caenorhabditis elegans unc-4 protein.
Length = 184
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 20 AQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHL 61
A+RR+ R F+ Q+ ELE F+ Y RE LA + L
Sbjct: 50 AKRRRTRTNFSGWQLEELESAFEASHYPDVFMREALAMRLDL 91
>U41017-5|AAC48216.2| 495|Caenorhabditis elegans C.elegans homeobox
protein 21 protein.
Length = 495
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/55 (25%), Positives = 31/55 (56%)
Query: 26 RVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQFHNGPVDNLRRVNIN 80
R+ FT+ Q+ L++ F+Q + R+ L++ + L + N +++ RR+ I+
Sbjct: 395 RLTFTETQLKSLQKSFQQNHRPTREMRQKLSATLELDFSTVGNFFMNSRRRLRID 449
>AJ427855-1|CAD20808.1| 495|Caenorhabditis elegans CEH-21 protein
protein.
Length = 495
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/55 (25%), Positives = 31/55 (56%)
Query: 26 RVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQFHNGPVDNLRRVNIN 80
R+ FT+ Q+ L++ F+Q + R+ L++ + L + N +++ RR+ I+
Sbjct: 395 RLTFTETQLKSLQKSFQQNHRPTREMRQKLSATLELDFSTVGNFFMNSRRRLRID 449
>AF023470-1|AAB86814.1| 183|Caenorhabditis elegans CEH-21 protein.
Length = 183
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/55 (25%), Positives = 31/55 (56%)
Query: 26 RVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQFHNGPVDNLRRVNIN 80
R+ FT+ Q+ L++ F+Q + R+ L++ + L + N +++ RR+ I+
Sbjct: 83 RLTFTETQLKSLQKSFQQNHRPTREMRQKLSATLELDFSTVGNFFMNSRRRLRID 137
>U88165-8|AAK21391.1| 581|Caenorhabditis elegans Hypothetical
protein F54C1.1 protein.
Length = 581
Score = 26.2 bits (55), Expect = 5.3
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 55 LASLIHLTPTQFHNGPVDNLRRVNINFINSPCN-PDKGPQTSMNNLHF 101
LA L++ + QF N P+ + ++N SP + P G S N++ F
Sbjct: 157 LAHLLNASVIQFSNWPLSDGYVTSLNLPASPASVPKTGTHHSSNSMSF 204
>U41017-6|AAC48215.1| 399|Caenorhabditis elegans C.elegans homeobox
protein 39 protein.
Length = 399
Score = 26.2 bits (55), Expect = 5.3
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 10 PDAKPMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQFHNG 69
P + Q + R RR FTQ Q+ L F+QQ + ++ L++ + L + N
Sbjct: 305 PAKRARQTTPSDERIRRFTFTQTQLDSLHTVFQQQDRPNREMQQALSATLKLNRSTVGNF 364
Query: 70 PVDNLRRV 77
++ RR+
Sbjct: 365 FMNARRRL 372
>AL033514-2|CAA22093.2| 233|Caenorhabditis elegans Hypothetical
protein Y75B8A.2a protein.
Length = 233
Score = 26.2 bits (55), Expect = 5.3
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 12/90 (13%)
Query: 3 GLAACAGPDAKPMQFPLA---QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLI 59
G +A P+A M P A +K+R + + Q+ LE + +YL+ R L++ +
Sbjct: 141 GSSAATTPNAA-MHLPWAISHDGKKKRQPYKKDQISRLEYEYSVNQYLTNKRRSELSAQL 199
Query: 60 HLTPTQ--------FHNGPVDNLRRVNINF 81
L Q + ++L +N+NF
Sbjct: 200 MLDEKQVKVWFQVCYRQYSAESLEIINVNF 229
>AF172091-1|AAD48875.1| 233|Caenorhabditis elegans NOB-1B protein
protein.
Length = 233
Score = 26.2 bits (55), Expect = 5.3
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 12/90 (13%)
Query: 3 GLAACAGPDAKPMQFPLA---QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLI 59
G +A P+A M P A +K+R + + Q+ LE + +YL+ R L++ +
Sbjct: 141 GSSAATTPNAA-MHLPWAISHDGKKKRQPYKKDQISRLEYEYSVNQYLTNKRRSELSAQL 199
Query: 60 HLTPTQ--------FHNGPVDNLRRVNINF 81
L Q + ++L +N+NF
Sbjct: 200 MLDEKQVKVWFQVCYRQYSAESLEIINVNF 229
>Z70287-7|CAA94303.2| 198|Caenorhabditis elegans Hypothetical
protein R09E10.2 protein.
Length = 198
Score = 25.8 bits (54), Expect = 7.0
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 59 IHLTPTQFHNG-P--VDNLRRVNINFINSPCNPDKGP 92
+H+T +Q +G P +N V +NF P NP + P
Sbjct: 8 MHITSSQLEDGFPSITNNFLTVTVNFNYDPSNPSEPP 44
>Z81132-1|CAB03430.1| 361|Caenorhabditis elegans Hypothetical
protein T26E4.1 protein.
Length = 361
Score = 25.4 bits (53), Expect = 9.3
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 50 PEREHLASLIHLTPTQFHNGPVDNLRRVNINFINS 84
PE EHL ++ F V+N NI+F+ S
Sbjct: 236 PENEHLVHQLNTVEVIFGGLVVNNTNLTNIDFLES 270
>Z81117-4|CAB03319.1| 249|Caenorhabditis elegans Hypothetical
protein T06E6.10 protein.
Length = 249
Score = 25.4 bits (53), Expect = 9.3
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 5/32 (15%)
Query: 79 INFINSPCNPDKGPQTSMNNLHFEGVNTIYGD 110
+NF++ P NP GP N HF G I D
Sbjct: 174 LNFLSEPFNPGCGP-----NEHFVGCKNICSD 200
>AL033514-3|CAC70124.1| 218|Caenorhabditis elegans Hypothetical
protein Y75B8A.2b protein.
Length = 218
Score = 25.4 bits (53), Expect = 9.3
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 3 GLAACAGPDAKPMQFPLA---QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLI 59
G +A P+A M P A +K+R + + Q+ LE + +YL+ R L++ +
Sbjct: 116 GSSAATTPNAA-MHLPWAISHDGKKKRQPYKKDQISRLEYEYSVNQYLTNKRRSELSAQL 174
Query: 60 HLTPTQ 65
L Q
Sbjct: 175 MLDEKQ 180
>AL031620-3|CAA20928.1| 310|Caenorhabditis elegans Hypothetical
protein C18B12.3 protein.
Length = 310
Score = 25.4 bits (53), Expect = 9.3
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 22 RRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHL 61
RR+ R FT+ Q LE FK+ Y ++++A + +
Sbjct: 180 RRRFRTNFTELQSTFLEDSFKESHYPDHKAKKYMADFLKI 219
>AF172090-1|AAD48874.1| 218|Caenorhabditis elegans homeodomain
protein NOB-1A protein.
Length = 218
Score = 25.4 bits (53), Expect = 9.3
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 3 GLAACAGPDAKPMQFPLA---QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLI 59
G +A P+A M P A +K+R + + Q+ LE + +YL+ R L++ +
Sbjct: 116 GSSAATTPNAA-MHLPWAISHDGKKKRQPYKKDQISRLEYEYSVNQYLTNKRRSELSAQL 174
Query: 60 HLTPTQ 65
L Q
Sbjct: 175 MLDEKQ 180
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.137 0.417
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,039,023
Number of Sequences: 27539
Number of extensions: 118642
Number of successful extensions: 395
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 310
Number of HSP's gapped (non-prelim): 92
length of query: 112
length of database: 12,573,161
effective HSP length: 72
effective length of query: 40
effective length of database: 10,590,353
effective search space: 423614120
effective search space used: 423614120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)
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