Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000762-TA|BGIBMGA000762-PA|IPR001356|Homeobox,
IPR009057|Homeodomain-like
(112 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee homeobox-... 44 4e-07
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 40 7e-06
M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 32 0.001
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 32 0.001
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 31 0.002
M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-... 30 0.006
M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-... 30 0.006
M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee homeobox-... 28 0.030
AB248729-1|BAF02606.1| 43|Apis mellifera distal-less protein. 26 0.12
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 20 8.0
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 20 8.0
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 20 8.0
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 20 8.0
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 20 8.0
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 20 8.0
>M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H17. ).
Length = 79
Score = 44.0 bits (99), Expect = 4e-07
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
RK R FT Q+ LE++F++++YL+ ER +S +HLT TQ
Sbjct: 10 RKPRTPFTTQQLLSLEKKFREKQYLTIAERAEFSSSLHLTETQ 52
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 39.9 bits (89), Expect = 7e-06
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+ R+ R FT Q+ LE +FK +YLS ER +LA + LT TQ
Sbjct: 7 EARRARTAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQ 51
>M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H90. ).
Length = 74
Score = 32.3 bits (70), Expect = 0.001
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+R++ R +T+ Q ELE+ F +YL+ R +A + LT Q
Sbjct: 7 ERKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQ 51
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 32.3 bits (70), Expect = 0.001
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+R++ R +T+ Q ELE+ F +YL+ R +A + LT Q
Sbjct: 269 ERKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQ 313
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 31.5 bits (68), Expect = 0.002
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 22 RRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
RR+ R +T+ Q ELE+ F YL+ R +A + LT Q
Sbjct: 8 RRRGRQTYTRFQTLELEKEFHYNHYLTRRRRIEIAHALCLTERQ 51
>M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E30. ).
Length = 109
Score = 30.3 bits (65), Expect = 0.006
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+ ++ R F+ Q+ L+R F + +YL+ R+ L+ + LT Q
Sbjct: 19 EEKRPRTAFSAEQLARLKREFAENRYLTERRRQQLSRDLGLTEAQ 63
>M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H55. ).
Length = 86
Score = 30.3 bits (65), Expect = 0.006
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 23 RKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+++R +T+ Q ELE+ F +YL+ R +A + LT Q
Sbjct: 9 KRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 51
>M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E60. ).
Length = 109
Score = 27.9 bits (59), Expect = 0.030
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 21 QRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQ 65
+ ++ R F+ Q+ L+R F + +YL+ R+ L+ + L Q
Sbjct: 19 EEKRPRTAFSGEQLARLKREFAENRYLTERRRQQLSRDLGLNEAQ 63
>AB248729-1|BAF02606.1| 43|Apis mellifera distal-less protein.
Length = 43
Score = 25.8 bits (54), Expect = 0.12
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 42 KQQKYLSAPEREHLASLIHLTPTQ 65
++ +YL+ PER LA+ + LT TQ
Sbjct: 1 QRTQYLALPERAELAASLGLTQTQ 24
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 19.8 bits (39), Expect = 8.0
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 97 NNLHFEGVNTI 107
N++H+EGV I
Sbjct: 291 NDIHYEGVQNI 301
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 19.8 bits (39), Expect = 8.0
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 60 HLTPTQFHN 68
HLTP +FH+
Sbjct: 403 HLTPKRFHS 411
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 19.8 bits (39), Expect = 8.0
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 60 HLTPTQFHN 68
HLTP +FH+
Sbjct: 403 HLTPKRFHS 411
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 19.8 bits (39), Expect = 8.0
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 97 NNLHFEGVNTI 107
N++H+EGV I
Sbjct: 291 NDIHYEGVQNI 301
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 19.8 bits (39), Expect = 8.0
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 97 NNLHFEGVNTI 107
N++H+EGV I
Sbjct: 291 NDIHYEGVQNI 301
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 19.8 bits (39), Expect = 8.0
Identities = 6/25 (24%), Positives = 16/25 (64%)
Query: 36 ELERRFKQQKYLSAPEREHLASLIH 60
+ E+ F+Q + +P E+ ++++H
Sbjct: 723 DTEQHFRQHRDSLSPRVENRSAIVH 747
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.321 0.137 0.417
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,474
Number of Sequences: 429
Number of extensions: 1292
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of query: 112
length of database: 140,377
effective HSP length: 50
effective length of query: 62
effective length of database: 118,927
effective search space: 7373474
effective search space used: 7373474
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.9 bits)
S2: 39 (19.8 bits)
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