Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000761-TA|BGIBMGA000761-PA|undefined
(281 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D50741-1|BAA23528.1| 126|Homo sapiens Thyroid transcriptional f... 43 0.001
D50740-1|BAA23529.1| 371|Homo sapiens thyroid transcriptional f... 42 0.003
AL158013-1|CAH71494.1| 354|Homo sapiens NK2 transcription facto... 40 0.013
X82850-1|CAA58053.1| 371|Homo sapiens thyroid transcription fac... 39 0.017
U43203-1|AAA89066.1| 401|Homo sapiens thyroid transcription fac... 39 0.017
U33749-1|AAB52381.1| 371|Homo sapiens thyroid transcription fac... 39 0.017
U19816-1|AAC50125.1| 371|Homo sapiens thyroid transcription fac... 39 0.017
U19756-1|AAA86099.1| 371|Homo sapiens thyroid transcription fac... 39 0.017
BT009773-1|AAP88775.1| 401|Homo sapiens thyroid transcription f... 39 0.017
BC006221-1|AAH06221.2| 371|Homo sapiens TITF1 protein protein. 39 0.017
AF202037-1|AAG35617.1| 289|Homo sapiens homeobox transcription ... 39 0.023
D50739-1|BAA23527.1| 358|Homo sapiens thyroid transcription fac... 36 0.21
U33627-1|AAA83233.1| 71|Homo sapiens thyroid transcription fac... 35 0.28
AF167628-1|AAF15459.1| 89|Homo sapiens immunoglobulin heavy ch... 31 6.0
>D50741-1|BAA23528.1| 126|Homo sapiens Thyroid transcriptional
factor-1 truncated form protein.
Length = 126
Score = 42.7 bits (96), Expect = 0.001
Identities = 47/136 (34%), Positives = 62/136 (45%), Gaps = 28/136 (20%)
Query: 46 HSTPFSVTDILSPIEE-YRKLEL-ANNPPSPYRAHRTAYDVKATDDFIDYAQLSVDRXXX 103
H+TPFSV+DILSP+EE Y+K+ + +P A+R T +A
Sbjct: 7 HTTPFSVSDILSPLEESYKKVGMEGGGLGAPLAAYRQGQAAPHTAAMQQHA--------- 57
Query: 104 XXXXXXXPLGPAASCGMTANPYAVPLYGGAPVQGYGC-----APTDLPHYGD-MR----G 153
P A+ MTA VP + V GY C ++LP Y D MR G
Sbjct: 58 ----VGHPGAVTAAYHMTA--AGVPQLSHSAVGGY-CNGNLGNMSELPPYQDTMRNSASG 110
Query: 154 AGWYPASNDPRFANNK 169
GWY A+ DPRF +K
Sbjct: 111 PGWYGANPDPRFPASK 126
>D50740-1|BAA23529.1| 371|Homo sapiens thyroid transcriptional
factor-1 protein.
Length = 371
Score = 41.5 bits (93), Expect = 0.003
Identities = 46/132 (34%), Positives = 60/132 (45%), Gaps = 28/132 (21%)
Query: 46 HSTPFSVTDILSPIEE-YRKLEL-ANNPPSPYRAHRTAYDVKATDDFIDYAQLSVDRXXX 103
H+TPFSV+DILSP+EE Y+K+ + +P A+R T +A
Sbjct: 7 HTTPFSVSDILSPLEESYKKVGMEGGGLGAPLAAYRQGQAAPHTAAMQQHA--------- 57
Query: 104 XXXXXXXPLGPAASCGMTANPYAVPLYGGAPVQGYGC-----APTDLPHYGD-MR----G 153
P A+ MTA VP + V GY C ++LP Y D MR G
Sbjct: 58 ----VGHPGAVTAAYHMTA--AGVPQLSHSAVGGY-CNGNLGNMSELPPYQDTMRNSASG 110
Query: 154 AGWYPASNDPRF 165
GWY A+ DPRF
Sbjct: 111 PGWYGANPDPRF 122
>AL158013-1|CAH71494.1| 354|Homo sapiens NK2 transcription factor
related, locus 4 (Drosophila) protein.
Length = 354
Score = 39.5 bits (88), Expect = 0.013
Identities = 45/142 (31%), Positives = 59/142 (41%), Gaps = 21/142 (14%)
Query: 46 HSTPFSVTDILSPIEE-YRKLELANN--PP---SPYRAHRTAYDVK---ATDDFIDYAQL 96
H+TPFSV+DILSPIEE Y+K A + PP +P A AY + A +
Sbjct: 7 HTTPFSVSDILSPIEETYKKFSGAMDGAPPGLGAPLGA-AAAYRAPPPGPSSQAATVAGM 65
Query: 97 SVDRXXXXXXXXXXPLGPAASCGMTANPYAVPLYGGAP--VQGYGC-----APTDLPHYG 149
AA+ A + P P G C +LP Y
Sbjct: 66 QPSHAMAGHNAAAAAAAAAAAAAAAATYHMPPGVSQFPHGAMGSYCNGGLGNMGELPAYT 125
Query: 150 D-MRG---AGWYPASNDPRFAN 167
D MRG GWY A+ DPR+++
Sbjct: 126 DGMRGGAATGWYGANPDPRYSS 147
>X82850-1|CAA58053.1| 371|Homo sapiens thyroid transcription factor
1 protein.
Length = 371
Score = 39.1 bits (87), Expect = 0.017
Identities = 46/132 (34%), Positives = 61/132 (46%), Gaps = 28/132 (21%)
Query: 46 HSTPFSVTDILSPIEE-YRKLEL-ANNPPSPYRAHRTAYDVKATDDFIDYAQLSVDRXXX 103
H+TPFSV+DILSP+EE Y+K+ + +P A+R +A Q +V
Sbjct: 7 HTTPFSVSDILSPLEESYKKVGMEGGGLGAPLAAYRQG---QAAPPTAAMQQHAVGHHGA 63
Query: 104 XXXXXXXPLGPAASCGMTANPYAVPLYGGAPVQGYGC-----APTDLPHYGD-MR----G 153
A+ MTA VP + V GY C ++LP Y D MR G
Sbjct: 64 V----------TAAYHMTA--AGVPQLSHSAVGGY-CNGNLGNMSELPPYQDTMRNSASG 110
Query: 154 AGWYPASNDPRF 165
GWY A+ DPRF
Sbjct: 111 PGWYGANPDPRF 122
>U43203-1|AAA89066.1| 401|Homo sapiens thyroid transcription factor
1 protein.
Length = 401
Score = 39.1 bits (87), Expect = 0.017
Identities = 46/132 (34%), Positives = 61/132 (46%), Gaps = 28/132 (21%)
Query: 46 HSTPFSVTDILSPIEE-YRKLEL-ANNPPSPYRAHRTAYDVKATDDFIDYAQLSVDRXXX 103
H+TPFSV+DILSP+EE Y+K+ + +P A+R +A Q +V
Sbjct: 37 HTTPFSVSDILSPLEESYKKVGMEGGGLGAPLAAYRQG---QAAPPTAAMQQHAVGHHGA 93
Query: 104 XXXXXXXPLGPAASCGMTANPYAVPLYGGAPVQGYGC-----APTDLPHYGD-MR----G 153
A+ MTA VP + V GY C ++LP Y D MR G
Sbjct: 94 V----------TAAYHMTA--AGVPQLSHSAVGGY-CNGNLGNMSELPPYQDTMRNSASG 140
Query: 154 AGWYPASNDPRF 165
GWY A+ DPRF
Sbjct: 141 PGWYGANPDPRF 152
>U33749-1|AAB52381.1| 371|Homo sapiens thyroid transcription
factor-1 protein.
Length = 371
Score = 39.1 bits (87), Expect = 0.017
Identities = 46/132 (34%), Positives = 61/132 (46%), Gaps = 28/132 (21%)
Query: 46 HSTPFSVTDILSPIEE-YRKLEL-ANNPPSPYRAHRTAYDVKATDDFIDYAQLSVDRXXX 103
H+TPFSV+DILSP+EE Y+K+ + +P A+R +A Q +V
Sbjct: 7 HTTPFSVSDILSPLEESYKKVGMEGGGLGAPLAAYRQG---QAAPPTAAMQQHAVGHHGA 63
Query: 104 XXXXXXXPLGPAASCGMTANPYAVPLYGGAPVQGYGC-----APTDLPHYGD-MR----G 153
A+ MTA VP + V GY C ++LP Y D MR G
Sbjct: 64 V----------TAAYHMTA--AGVPQLSHSAVGGY-CNGNLGNMSELPPYQDTMRNSASG 110
Query: 154 AGWYPASNDPRF 165
GWY A+ DPRF
Sbjct: 111 PGWYGANPDPRF 122
>U19816-1|AAC50125.1| 371|Homo sapiens thyroid transcription
factor-1 protein.
Length = 371
Score = 39.1 bits (87), Expect = 0.017
Identities = 46/132 (34%), Positives = 61/132 (46%), Gaps = 28/132 (21%)
Query: 46 HSTPFSVTDILSPIEE-YRKLEL-ANNPPSPYRAHRTAYDVKATDDFIDYAQLSVDRXXX 103
H+TPFSV+DILSP+EE Y+K+ + +P A+R +A Q +V
Sbjct: 7 HTTPFSVSDILSPLEESYKKVGMEGGGLGAPLAAYRQG---QAAPPTAAMQQHAVGHHGA 63
Query: 104 XXXXXXXPLGPAASCGMTANPYAVPLYGGAPVQGYGC-----APTDLPHYGD-MR----G 153
A+ MTA VP + V GY C ++LP Y D MR G
Sbjct: 64 V----------TAAYHMTA--AGVPQLSHSAVGGY-CNGNLGNMSELPPYQDTMRNSASG 110
Query: 154 AGWYPASNDPRF 165
GWY A+ DPRF
Sbjct: 111 PGWYGANPDPRF 122
>U19756-1|AAA86099.1| 371|Homo sapiens thyroid transcription factor
1 protein.
Length = 371
Score = 39.1 bits (87), Expect = 0.017
Identities = 46/132 (34%), Positives = 61/132 (46%), Gaps = 28/132 (21%)
Query: 46 HSTPFSVTDILSPIEE-YRKLEL-ANNPPSPYRAHRTAYDVKATDDFIDYAQLSVDRXXX 103
H+TPFSV+DILSP+EE Y+K+ + +P A+R +A Q +V
Sbjct: 7 HTTPFSVSDILSPLEESYKKVGMEGGGLGAPLAAYRQG---QAAPPTAAMQQHAVGHHGA 63
Query: 104 XXXXXXXPLGPAASCGMTANPYAVPLYGGAPVQGYGC-----APTDLPHYGD-MR----G 153
A+ MTA VP + V GY C ++LP Y D MR G
Sbjct: 64 V----------TAAYHMTA--AGVPQLSHSAVGGY-CNGNLGNMSELPPYQDTMRNSASG 110
Query: 154 AGWYPASNDPRF 165
GWY A+ DPRF
Sbjct: 111 PGWYGANPDPRF 122
>BT009773-1|AAP88775.1| 401|Homo sapiens thyroid transcription
factor 1 protein.
Length = 401
Score = 39.1 bits (87), Expect = 0.017
Identities = 46/132 (34%), Positives = 61/132 (46%), Gaps = 28/132 (21%)
Query: 46 HSTPFSVTDILSPIEE-YRKLEL-ANNPPSPYRAHRTAYDVKATDDFIDYAQLSVDRXXX 103
H+TPFSV+DILSP+EE Y+K+ + +P A+R +A Q +V
Sbjct: 37 HTTPFSVSDILSPLEESYKKVGMEGGGLGAPLAAYRQG---QAAPPTAAMQQHAVGHHGA 93
Query: 104 XXXXXXXPLGPAASCGMTANPYAVPLYGGAPVQGYGC-----APTDLPHYGD-MR----G 153
A+ MTA VP + V GY C ++LP Y D MR G
Sbjct: 94 V----------TAAYHMTA--AGVPQLSHSAVGGY-CNGNLGNMSELPPYQDTMRNSASG 140
Query: 154 AGWYPASNDPRF 165
GWY A+ DPRF
Sbjct: 141 PGWYGANPDPRF 152
>BC006221-1|AAH06221.2| 371|Homo sapiens TITF1 protein protein.
Length = 371
Score = 39.1 bits (87), Expect = 0.017
Identities = 46/132 (34%), Positives = 61/132 (46%), Gaps = 28/132 (21%)
Query: 46 HSTPFSVTDILSPIEE-YRKLEL-ANNPPSPYRAHRTAYDVKATDDFIDYAQLSVDRXXX 103
H+TPFSV+DILSP+EE Y+K+ + +P A+R +A Q +V
Sbjct: 7 HTTPFSVSDILSPLEESYKKVGMEGGGLGAPLAAYRQG---QAAPPTAAMQQHAVGHHGA 63
Query: 104 XXXXXXXPLGPAASCGMTANPYAVPLYGGAPVQGYGC-----APTDLPHYGD-MR----G 153
A+ MTA VP + V GY C ++LP Y D MR G
Sbjct: 64 V----------TAAYHMTA--AGVPQLSHSAVGGY-CNGNLGNMSELPPYQDTMRNSASG 110
Query: 154 AGWYPASNDPRF 165
GWY A+ DPRF
Sbjct: 111 PGWYGANPDPRF 122
>AF202037-1|AAG35617.1| 289|Homo sapiens homeobox transcription
factor protein.
Length = 289
Score = 38.7 bits (86), Expect = 0.023
Identities = 46/142 (32%), Positives = 62/142 (43%), Gaps = 21/142 (14%)
Query: 46 HSTPFSVTDILSPIEE-YRKLELANN--PP---SPYRAHRTAYDVKATDDFIDYAQLS-- 97
H+TPFSV+DILSPIEE Y+K A + PP +P A AY A ++
Sbjct: 7 HTTPFSVSDILSPIEETYKKFSGAMDGAPPGLGAPLGA-AAAYRAPPPGPSSQAATVAGM 65
Query: 98 VDRXXXXXXXXXXPLGPAASCGMTANPYAVPL------YG--GAPVQGYGCAPTDLPHYG 149
AA+ A Y +P +G G+ G +LP Y
Sbjct: 66 QPSHAMAGHNAAAAAAAAAAAAAAAATYHMPAGVSQFPHGAMGSYCNGGLGNMGELPAYT 125
Query: 150 D-MRG---AGWYPASNDPRFAN 167
D MRG GWY A+ DPR+++
Sbjct: 126 DGMRGGAATGWYGANPDPRYSS 147
>D50739-1|BAA23527.1| 358|Homo sapiens thyroid transcription
factor-1 protein.
Length = 358
Score = 35.5 bits (78), Expect = 0.21
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Query: 46 HSTPFSVTDILSPIEE-YRKLEL-ANNPPSPYRAHR 79
H+TPFSV+DILSP+EE Y+K+ + +P A+R
Sbjct: 7 HTTPFSVSDILSPLEESYKKVGMEGGGLGAPLAAYR 42
>U33627-1|AAA83233.1| 71|Homo sapiens thyroid transcription
factor-1 protein.
Length = 71
Score = 35.1 bits (77), Expect = 0.28
Identities = 15/21 (71%), Positives = 20/21 (95%), Gaps = 1/21 (4%)
Query: 46 HSTPFSVTDILSPIEE-YRKL 65
H+TPFSV+DILSP+EE Y+K+
Sbjct: 37 HTTPFSVSDILSPLEESYKKV 57
>AF167628-1|AAF15459.1| 89|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 89
Score = 30.7 bits (66), Expect = 6.0
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 198 TVRVVNYCTTESLQLSRLTAIEARRFPINCARYIRYNVFTGHPRGDAQYLY 248
T+ N T LQ++ L A + + CAR I Y+ ++G+P+G A Y Y
Sbjct: 34 TISRDNSKNTLYLQMNSLRAEDTAVY--YCARSIYYDFWSGYPQGRAYYYY 82
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.321 0.138 0.440
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,981,930
Number of Sequences: 224733
Number of extensions: 1538791
Number of successful extensions: 2303
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2279
Number of HSP's gapped (non-prelim): 25
length of query: 281
length of database: 73,234,838
effective HSP length: 89
effective length of query: 192
effective length of database: 53,233,601
effective search space: 10220851392
effective search space used: 10220851392
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)
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